RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 A0A0U1RRA0 63 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 LOC107984640A0A0U1RRK4 108 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 KRTAP13-3Q3SY46 172 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 NHP2Q9NX24 153 aaKnown RBP2.76□□□□□ -1.97
ERCC1-216ENST00000592444 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
ERCC1-216ENST00000592444 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 MT3P25713 68 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 RPL28P46779 137 aaKnown RBP2.75□□□□□ -1.97
ERCC1-216ENST00000592444 LINC00158P58513 81 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 NPC2P61916 151 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 RPL24P83731 157 aaKnown RBP2.75□□□□□ -1.97
ERCC1-216ENST00000592444 FAM218AQ96MZ4 157 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 KCNQ1DNQ9H478 68 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 PRO0461Q9UI25 63 aa2.75□□□□□ -1.97
ERCC1-216ENST00000592444 TRBV10-3A0A0K0K1G6 114 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 M0R378 163 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 COL5A1-AS1Q5SY13 56 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 MPLKIPQ8TAP9 179 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 SMIM11BQ8TCY0 68 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 LINC00167Q96N53 147 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ERCC1-216ENST00000592444 IGLV8-61A0A075B6I0 122 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 A0A1W2PPM0 123 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 A6NDN8 102 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 NCR3O14931 201 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 RPL18AQ02543 176 aaKnown RBP2.73□□□□□ -1.97
ERCC1-216ENST00000592444 GAGE2EQ4V326 116 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 NAA38Q9BRA0 125 aaKnown RBP2.73□□□□□ -1.97
ERCC1-216ENST00000592444 Q9BRP9 147 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 GAGE2DQ9UEU5 116 aa2.73□□□□□ -1.97
ERCC1-216ENST00000592444 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 TRBV7-6A0A0J9YX20 115 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 A0A1B0GV90 55 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 M0QXV9 152 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 LST1O00453 97 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 PRYO14603 147 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 TCL1BO95988 128 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 ELOF1P60002 83 aaKnown RBP2.72□□□□□ -1.97
ERCC1-216ENST00000592444 MRPL55Q7Z7F7 128 aaKnown RBP2.72□□□□□ -1.97
ERCC1-216ENST00000592444 TYMSOSQ8TAI1 123 aa2.72□□□□□ -1.97
ERCC1-216ENST00000592444 A0A087X002 238 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 H3BUT2 72 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 K7EP34 96 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 MT2AP02795 61 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 GAGE2BQ13066 116 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 BATFQ16520 125 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 Q6ZRX8 168 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 PHF5AQ7RTV0 110 aaKnown RBP2.71□□□□□ -1.98
ERCC1-216ENST00000592444 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
ERCC1-216ENST00000592444 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 TMEM126AQ9H061 195 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 PKIGQ9Y2B9 76 aa2.71□□□□□ -1.98
ERCC1-216ENST00000592444 TRAV23DV6A0A075B6W5 121 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
ERCC1-216ENST00000592444 C6orf99Q4VX62 202 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 SMCR5Q8TEV8 140 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 CLEC2BQ92478 149 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 RAB37Q96AX2 223 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 LINC00474Q9P2X8 69 aa2.7□□□□□ -1.98
ERCC1-216ENST00000592444 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
ERCC1-216ENST00000592444 ERC2-IT1O76042 136 aa2.69□□□□□ -1.98
ERCC1-216ENST00000592444 TRACP01848 142 aa2.69□□□□□ -1.98
ERCC1-216ENST00000592444 MT1FP04733 61 aa2.69□□□□□ -1.98
ERCC1-216ENST00000592444 LINC00575Q6W349 94 aa2.69□□□□□ -1.98
ERCC1-216ENST00000592444 A0A1B0GX51 115 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 GAGE10A6NGK3 116 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 RPL37AP8A6NKH3 93 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 SPRR1BP22528 89 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 PCOTHQ58A44 107 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 LINC00304Q8N9R0 145 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
ERCC1-216ENST00000592444 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 BCE1O60756 84 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 LINC00483Q53H64 154 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 FP248Q71RG6 208 aaPredicted RBP2.67□□□□□ -1.98
ERCC1-216ENST00000592444 SMIM29Q86T20 159 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 NKAPP1Q8N9T2 125 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 SPCS1Q9Y6A9 102 aa2.67□□□□□ -1.98
ERCC1-216ENST00000592444 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
ERCC1-216ENST00000592444 TRBV20-1A0A075B6N2 111 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 H3BMG7 143 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 H7C2G1 150 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 FABP2P12104 132 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 SPRR2EP22531 72 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 SPRR2BP35325 72 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 SPRR2AP35326 72 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 PRLHP81277 87 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 UBE2V1Q13404 147 aa2.66□□□□□ -1.98
ERCC1-216ENST00000592444 H0YGX0 51 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 H3BT86 120 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 S100A7L2Q5SY68 101 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 Q8N377 158 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 MTURNQ8N3F0 131 aa2.65□□□□□ -1.99
ERCC1-216ENST00000592444 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
ERCC1-216ENST00000592444 COX7BP24311 80 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 290.9 ms