RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	PYY3	Q5JQD4	70 aa		5.19	□□□□□ -1.58
DNMT1-223	ENST00000591239	SMIM29	Q86T20	159 aa		5.19	□□□□□ -1.58
DNMT1-223	ENST00000591239	hADV29S1	A0JD25	119 aa		5.18	□□□□□ -1.58
DNMT1-223	ENST00000591239	HRCT1	Q6UXD1	115 aa		5.18	□□□□□ -1.58
DNMT1-223	ENST00000591239		H7C2G1	150 aa		5.17	□□□□□ -1.58
DNMT1-223	ENST00000591239	BVES-AS1	Q5T3Y7	98 aa		5.17	□□□□□ -1.58
DNMT1-223	ENST00000591239	CEND1	Q8N111	149 aa		5.17	□□□□□ -1.58
DNMT1-223	ENST00000591239	RAB37	Q96AX2	223 aa		5.17	□□□□□ -1.58
DNMT1-223	ENST00000591239	PRO1933	Q9H354	126 aa		5.17	□□□□□ -1.58
DNMT1-223	ENST00000591239		A0A0B4J2C4	111 aa		5.16	□□□□□ -1.58
DNMT1-223	ENST00000591239		Q6ZQY7	126 aa		5.16	□□□□□ -1.58
DNMT1-223	ENST00000591239	MUC2	Q02817	5179 aa		5.16	□□□□□ -1.58
DNMT1-223	ENST00000591239	CD164	Q04900	197 aa		5.15	□□□□□ -1.59
DNMT1-223	ENST00000591239	KRTAP13-3	Q3SY46	172 aa		5.15	□□□□□ -1.59
DNMT1-223	ENST00000591239	LIMD2	Q9BT23	127 aa		5.15	□□□□□ -1.59
DNMT1-223	ENST00000591239	FXYD2	P54710	66 aa		5.14	□□□□□ -1.59
DNMT1-223	ENST00000591239		A0A0G2JQZ4	141 aa		5.13	□□□□□ -1.59
DNMT1-223	ENST00000591239		F8WEM9	126 aa		5.13	□□□□□ -1.59
DNMT1-223	ENST00000591239	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.13	□□□□□ -1.59
DNMT1-223	ENST00000591239	PRO1854	Q9UHT4	67 aa		5.13	□□□□□ -1.59
DNMT1-223	ENST00000591239		H0YGX0	51 aa		5.12	□□□□□ -1.59
DNMT1-223	ENST00000591239	SNCG	O76070	127 aa		5.11	□□□□□ -1.59
DNMT1-223	ENST00000591239	HSD52	Q0P140	79 aa		5.11	□□□□□ -1.59
DNMT1-223	ENST00000591239	PPDPFL	Q8WWR9	84 aa		5.11	□□□□□ -1.59
DNMT1-223	ENST00000591239	IGLV8-61	A0A075B6I0	122 aa		5.1	□□□□□ -1.59
DNMT1-223	ENST00000591239		Q5XG85	94 aa		5.1	□□□□□ -1.59
DNMT1-223	ENST00000591239	FAM218A	Q96MZ4	157 aa		5.1	□□□□□ -1.59
DNMT1-223	ENST00000591239	SNHG12	Q9BXW3	62 aa		5.1	□□□□□ -1.59
DNMT1-223	ENST00000591239	UQCR10	Q9UDW1	63 aa		5.1	□□□□□ -1.59
DNMT1-223	ENST00000591239	OCIAD2	Q56VL3	154 aa		5.09	□□□□□ -1.59
DNMT1-223	ENST00000591239		Q6JHZ5	121 aa		5.09	□□□□□ -1.59
DNMT1-223	ENST00000591239	TRIAP1	O43715	76 aa		5.08	□□□□□ -1.6
DNMT1-223	ENST00000591239	IGFL1	Q6UW32	110 aa		5.08	□□□□□ -1.6
DNMT1-223	ENST00000591239	CLEC2B	Q92478	149 aa		5.08	□□□□□ -1.6
DNMT1-223	ENST00000591239	LOC105371267	A0A1B0GV96	52 aa		5.07	□□□□□ -1.6
DNMT1-223	ENST00000591239		A0A1B0GX51	115 aa		5.07	□□□□□ -1.6
DNMT1-223	ENST00000591239		K7ERJ3	54 aa		5.07	□□□□□ -1.6
DNMT1-223	ENST00000591239	C1orf195	Q5TG92	126 aa		5.07	□□□□□ -1.6
DNMT1-223	ENST00000591239	MUC17	Q685J3	4493 aa		5.06	□□□□□ -1.6
DNMT1-223	ENST00000591239	TCL1B	O95988	128 aa		5.06	□□□□□ -1.6
DNMT1-223	ENST00000591239	ASB16-AS1	Q495Z4	193 aa		5.06	□□□□□ -1.6
DNMT1-223	ENST00000591239		A0A0U1RQV1	116 aa		5.05	□□□□□ -1.6
DNMT1-223	ENST00000591239		H3BUT2	72 aa		5.05	□□□□□ -1.6
DNMT1-223	ENST00000591239	PSMB2	P49721	201 aa		5.05	□□□□□ -1.6
DNMT1-223	ENST00000591239	NDUFV3	P56181	108 aa	Known RBP	5.05	□□□□□ -1.6
DNMT1-223	ENST00000591239	XP32	Q5T750	250 aa		5.05	□□□□□ -1.6
DNMT1-223	ENST00000591239	TRBV7-7	A0A0K0K1E9	115 aa		5.04	□□□□□ -1.6
DNMT1-223	ENST00000591239	C9orf92	A6NGG3	77 aa		5.04	□□□□□ -1.6
DNMT1-223	ENST00000591239	SEC61B	P60468	96 aa	Known RBP	5.04	□□□□□ -1.6
DNMT1-223	ENST00000591239	COX6C	P09669	75 aa		5.03	□□□□□ -1.6
DNMT1-223	ENST00000591239	FABP2	P12104	132 aa		5.03	□□□□□ -1.6
DNMT1-223	ENST00000591239		H3BMG7	143 aa		5.02	□□□□□ -1.61
DNMT1-223	ENST00000591239	DNAL4	O96015	105 aa		5.02	□□□□□ -1.61
DNMT1-223	ENST00000591239	SMIM6	P0DI80	62 aa		5.01	□□□□□ -1.61
DNMT1-223	ENST00000591239	KRTAP23-1	A1A580	65 aa		5	□□□□□ -1.61
DNMT1-223	ENST00000591239		Q6Q795	121 aa		5	□□□□□ -1.61
DNMT1-223	ENST00000591239	TEN1	Q86WV5	123 aa		5	□□□□□ -1.61
DNMT1-223	ENST00000591239	ORMDL1	Q9P0S3	153 aa		5	□□□□□ -1.61
DNMT1-223	ENST00000591239		H3BQ85	93 aa		4.99	□□□□□ -1.61
DNMT1-223	ENST00000591239	SCGB1C2	P0DMR2	95 aa		4.99	□□□□□ -1.61
DNMT1-223	ENST00000591239	KRTAP19-4	Q3LI73	84 aa		4.99	□□□□□ -1.61
DNMT1-223	ENST00000591239	KRTAP4-1	Q9BYQ7	146 aa		4.99	□□□□□ -1.61
DNMT1-223	ENST00000591239	TMEM256-PLSCR3	K7ERE1	68 aa		4.98	□□□□□ -1.61
DNMT1-223	ENST00000591239	LST1	O00453	97 aa		4.98	□□□□□ -1.61
DNMT1-223	ENST00000591239	KRTAP9-6	A0A140TA67	174 aa		4.97	□□□□□ -1.61
DNMT1-223	ENST00000591239		M0R143	59 aa		4.97	□□□□□ -1.61
DNMT1-223	ENST00000591239	TRAC	P01848	142 aa		4.97	□□□□□ -1.61
DNMT1-223	ENST00000591239	SS18L2	Q9UHA2	77 aa		4.97	□□□□□ -1.61
DNMT1-223	ENST00000591239		A0A087WSZ3	146 aa		4.96	□□□□□ -1.62
DNMT1-223	ENST00000591239		A0A1B0GV72	72 aa		4.96	□□□□□ -1.62
DNMT1-223	ENST00000591239	PCOTH	Q58A44	107 aa		4.96	□□□□□ -1.62
DNMT1-223	ENST00000591239	FAT4	Q6V0I7	4981 aa		4.96	□□□□□ -1.62
DNMT1-223	ENST00000591239		A0A1W2PNM2	257 aa		4.95	□□□□□ -1.62
DNMT1-223	ENST00000591239	UBE2V1	Q13404	147 aa		4.95	□□□□□ -1.62
DNMT1-223	ENST00000591239	ANKRD29	Q8N6D5	301 aa		4.95	□□□□□ -1.62
DNMT1-223	ENST00000591239	TSTD3	H0UI37	97 aa		4.94	□□□□□ -1.62
DNMT1-223	ENST00000591239	TRBV7-4	A0A0J9YYF1	115 aa		4.93	□□□□□ -1.62
DNMT1-223	ENST00000591239	RPL37	P61927	97 aa	Known RBP	4.93	□□□□□ -1.62
DNMT1-223	ENST00000591239	OBSCN-AS1	Q96MR7	158 aa		4.93	□□□□□ -1.62
DNMT1-223	ENST00000591239	NAA38	Q9BRA0	125 aa	Known RBP	4.93	□□□□□ -1.62
DNMT1-223	ENST00000591239	BAALC-AS2	P0C853	105 aa		4.92	□□□□□ -1.62
DNMT1-223	ENST00000591239		Q96NJ1	140 aa		4.92	□□□□□ -1.62
DNMT1-223	ENST00000591239	CCK	P06307	115 aa		4.91	□□□□□ -1.62
DNMT1-223	ENST00000591239	RBM3	P98179	157 aa	Known RBP	4.9	□□□□□ -1.63
DNMT1-223	ENST00000591239	ATXN8	Q156A1	80 aa		4.9	□□□□□ -1.63
DNMT1-223	ENST00000591239	BATF	Q16520	125 aa		4.89	□□□□□ -1.63
DNMT1-223	ENST00000591239	DSCR8	Q96T75	97 aa		4.89	□□□□□ -1.63
DNMT1-223	ENST00000591239		Q75L30	129 aa		4.88	□□□□□ -1.63
DNMT1-223	ENST00000591239	SIGMAR1	Q99720	223 aa		4.88	□□□□□ -1.63
DNMT1-223	ENST00000591239	IGKV4-1	P06312	121 aa		4.87	□□□□□ -1.63
DNMT1-223	ENST00000591239	LYRM7	Q5U5X0	104 aa		4.87	□□□□□ -1.63
DNMT1-223	ENST00000591239	VPS25	Q9BRG1	176 aa		4.87	□□□□□ -1.63
DNMT1-223	ENST00000591239	TRBV20-1	A0A075B6N2	111 aa		4.86	□□□□□ -1.63
DNMT1-223	ENST00000591239		C9JAW5	83 aa		4.86	□□□□□ -1.63
DNMT1-223	ENST00000591239	ATP11AUN	Q6ZP68	121 aa		4.86	□□□□□ -1.63
DNMT1-223	ENST00000591239	LINC00472	Q9H8W2	130 aa		4.86	□□□□□ -1.63
DNMT1-223	ENST00000591239	DEFB116	Q30KQ4	102 aa		4.85	□□□□□ -1.63
DNMT1-223	ENST00000591239	KRTAP19-2	Q3LHN2	52 aa		4.85	□□□□□ -1.63
DNMT1-223	ENST00000591239	C20orf166-AS1	Q96NR2	134 aa		4.85	□□□□□ -1.63
DNMT1-223	ENST00000591239	KRTAP9-2	Q9BYQ4	174 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms