RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 LINC00304Q8N9R0 145 aa12.43□□□□□ -0.42
R3HDM4-206ENST00000590454 Q8NBF4 154 aa12.43□□□□□ -0.42
R3HDM4-206ENST00000590454 PRR4Q16378 134 aa12.42□□□□□ -0.42
R3HDM4-206ENST00000590454 BATFQ16520 125 aa12.42□□□□□ -0.42
R3HDM4-206ENST00000590454 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
R3HDM4-206ENST00000590454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.4□□□□□ -0.42
R3HDM4-206ENST00000590454 LAMTOR3Q9UHA4 124 aa12.4□□□□□ -0.42
R3HDM4-206ENST00000590454 NAA38Q9BRA0 125 aaKnown RBP12.39□□□□□ -0.43
R3HDM4-206ENST00000590454 SSBP3-AS1Q7Z2R9 100 aa12.37□□□□□ -0.43
R3HDM4-206ENST00000590454 COX6CP09669 75 aa12.34□□□□□ -0.43
R3HDM4-206ENST00000590454 LCE2AQ5TA79 106 aaPredicted RBP12.34□□□□□ -0.43
R3HDM4-206ENST00000590454 A0A0G2JQZ4 141 aa12.33□□□□□ -0.44
R3HDM4-206ENST00000590454 A0A1B0GX51 115 aa12.32□□□□□ -0.44
R3HDM4-206ENST00000590454 SCGB1C2P0DMR2 95 aa12.32□□□□□ -0.44
R3HDM4-206ENST00000590454 SNCGO76070 127 aa12.3□□□□□ -0.44
R3HDM4-206ENST00000590454 SPAG11AQ6PDA7 123 aa12.29□□□□□ -0.44
R3HDM4-206ENST00000590454 SNHG12Q9BXW3 62 aa12.29□□□□□ -0.44
R3HDM4-206ENST00000590454 C4orf48Q5BLP8 95 aa12.28□□□□□ -0.44
R3HDM4-206ENST00000590454 PPDPFLQ8WWR9 84 aa12.27□□□□□ -0.45
R3HDM4-206ENST00000590454 LST1O00453 97 aa12.26□□□□□ -0.45
R3HDM4-206ENST00000590454 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
R3HDM4-206ENST00000590454 OCIAD2Q56VL3 154 aa12.26□□□□□ -0.45
R3HDM4-206ENST00000590454 HRCT1Q6UXD1 115 aa12.26□□□□□ -0.45
R3HDM4-206ENST00000590454 RETNLBQ9BQ08 111 aa12.26□□□□□ -0.45
R3HDM4-206ENST00000590454 FAT4Q6V0I7 4981 aa12.25□□□□□ -0.45
R3HDM4-206ENST00000590454 PCP4L1A6NKN8 68 aa12.25□□□□□ -0.45
R3HDM4-206ENST00000590454 SPINK1P00995 79 aa12.24□□□□□ -0.45
R3HDM4-206ENST00000590454 F8WEM9 126 aa12.23□□□□□ -0.45
R3HDM4-206ENST00000590454 H3BUT2 72 aa12.23□□□□□ -0.45
R3HDM4-206ENST00000590454 DNAL4O96015 105 aa12.23□□□□□ -0.45
R3HDM4-206ENST00000590454 TCL1BO95988 128 aa12.22□□□□□ -0.45
R3HDM4-206ENST00000590454 TRACP01848 142 aa12.22□□□□□ -0.45
R3HDM4-206ENST00000590454 FABP2P12104 132 aa12.22□□□□□ -0.45
R3HDM4-206ENST00000590454 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
R3HDM4-206ENST00000590454 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
R3HDM4-206ENST00000590454 ORMDL1Q9P0S3 153 aa12.21□□□□□ -0.45
R3HDM4-206ENST00000590454 C9orf118A6NHY6 69 aa12.2□□□□□ -0.46
R3HDM4-206ENST00000590454 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
R3HDM4-206ENST00000590454 RPS29P62273 56 aaKnown RBP12.15□□□□□ -0.46
R3HDM4-206ENST00000590454 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
R3HDM4-206ENST00000590454 CD164Q04900 197 aa12.14□□□□□ -0.47
R3HDM4-206ENST00000590454 Q6JHZ5 121 aa12.14□□□□□ -0.47
R3HDM4-206ENST00000590454 A0A1B0GV72 72 aa12.13□□□□□ -0.47
R3HDM4-206ENST00000590454 A0A1W2PPM0 123 aa12.13□□□□□ -0.47
R3HDM4-206ENST00000590454 GHRHP01286 108 aa12.13□□□□□ -0.47
R3HDM4-206ENST00000590454 H3BMG7 143 aa12.12□□□□□ -0.47
R3HDM4-206ENST00000590454 TMEM256-PLSCR3K7ERE1 68 aa12.11□□□□□ -0.47
R3HDM4-206ENST00000590454 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
R3HDM4-206ENST00000590454 BAALC-AS2P0C853 105 aa12.1□□□□□ -0.47
R3HDM4-206ENST00000590454 H3BQ85 93 aa12.09□□□□□ -0.47
R3HDM4-206ENST00000590454 LYRM7Q5U5X0 104 aa12.09□□□□□ -0.47
R3HDM4-206ENST00000590454 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
R3HDM4-206ENST00000590454 UBE2V1Q13404 147 aa12.07□□□□□ -0.48
R3HDM4-206ENST00000590454 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
R3HDM4-206ENST00000590454 IGLV7-46A0A075B6I9 117 aa12.04□□□□□ -0.48
R3HDM4-206ENST00000590454 ANKRD29Q8N6D5 301 aa12.04□□□□□ -0.48
R3HDM4-206ENST00000590454 TRBV7-7A0A0K0K1E9 115 aa12.03□□□□□ -0.48
R3HDM4-206ENST00000590454 C9JAW5 83 aa12.03□□□□□ -0.48
R3HDM4-206ENST00000590454 Q5XG85 94 aa12.02□□□□□ -0.49
R3HDM4-206ENST00000590454 A0A1W2PNM2 257 aa12□□□□□ -0.49
R3HDM4-206ENST00000590454 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
R3HDM4-206ENST00000590454 CDIP1Q9H305 208 aa12□□□□□ -0.49
R3HDM4-206ENST00000590454 MTURNQ8N3F0 131 aa11.99□□□□□ -0.49
R3HDM4-206ENST00000590454 SPCS1Q9Y6A9 102 aa11.99□□□□□ -0.49
R3HDM4-206ENST00000590454 Q6Q795 121 aa11.98□□□□□ -0.49
R3HDM4-206ENST00000590454 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
R3HDM4-206ENST00000590454 TEN1Q86WV5 123 aa11.97□□□□□ -0.49
R3HDM4-206ENST00000590454 TPRXLQ17RH7 258 aa11.95□□□□□ -0.5
R3HDM4-206ENST00000590454 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
R3HDM4-206ENST00000590454 RBM3P98179 157 aaKnown RBP11.94□□□□□ -0.5
R3HDM4-206ENST00000590454 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
R3HDM4-206ENST00000590454 A0A087WSZ3 146 aa11.91□□□□□ -0.5
R3HDM4-206ENST00000590454 KRTAP13-3Q3SY46 172 aa11.91□□□□□ -0.5
R3HDM4-206ENST00000590454 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.5
R3HDM4-206ENST00000590454 K7EP34 96 aa11.89□□□□□ -0.51
R3HDM4-206ENST00000590454 CCKP06307 115 aa11.89□□□□□ -0.51
R3HDM4-206ENST00000590454 LCE2DQ5TA82 110 aaPredicted RBP11.89□□□□□ -0.51
R3HDM4-206ENST00000590454 DSCR8Q96T75 97 aa11.89□□□□□ -0.51
R3HDM4-206ENST00000590454 H3BT86 120 aa11.87□□□□□ -0.51
R3HDM4-206ENST00000590454 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
R3HDM4-206ENST00000590454 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
R3HDM4-206ENST00000590454 VPS25Q9BRG1 176 aa11.86□□□□□ -0.51
R3HDM4-206ENST00000590454 JMJD7-PLA2G4BH0Y9G9 81 aa11.85□□□□□ -0.51
R3HDM4-206ENST00000590454 C14orf132Q9NPU4 83 aa11.85□□□□□ -0.51
R3HDM4-206ENST00000590454 CRCT1Q9UGL9 99 aa11.85□□□□□ -0.51
R3HDM4-206ENST00000590454 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
R3HDM4-206ENST00000590454 Q6ZQT0 140 aa11.82□□□□□ -0.52
R3HDM4-206ENST00000590454 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
R3HDM4-206ENST00000590454 LOC110117498A0A087WWA1 95 aa11.81□□□□□ -0.52
R3HDM4-206ENST00000590454 Q96NJ1 140 aa11.81□□□□□ -0.52
R3HDM4-206ENST00000590454 C9orf92A6NGG3 77 aa11.79□□□□□ -0.52
R3HDM4-206ENST00000590454 FSIP2Q5CZC0 6907 aa11.76□□□□□ -0.53
R3HDM4-206ENST00000590454 GTF2H5Q6ZYL4 71 aa11.75□□□□□ -0.53
R3HDM4-206ENST00000590454 PDE6GP18545 87 aa11.72□□□□□ -0.53
R3HDM4-206ENST00000590454 XP32Q5T750 250 aa11.72□□□□□ -0.53
R3HDM4-206ENST00000590454 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
R3HDM4-206ENST00000590454 LINC00472Q9H8W2 130 aa11.7□□□□□ -0.54
R3HDM4-206ENST00000590454 IGKV4-1P06312 121 aa11.65□□□□□ -0.54
R3HDM4-206ENST00000590454 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
R3HDM4-206ENST00000590454 F8W1H4 67 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms