RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ATP7BP35670 1465 aa-0.35□□□□□ -2.46
SMAD4-207ENST00000589076 PRO1933Q9H354 126 aa-0.35□□□□□ -2.47
SMAD4-207ENST00000589076 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.35□□□□□ -2.47
SMAD4-207ENST00000589076 DNAJC13O75165 2243 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 H3BQ15 152 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 TRAPPC2P0DI81 140 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 TRAPPC2BP0DI82 140 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 S100A1P23297 94 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 LINC01600Q96MT4 127 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 C2orf88Q9BSF0 95 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 GNG8Q9UK08 70 aa-0.36□□□□□ -2.47
SMAD4-207ENST00000589076 SUPT6HQ7KZ85 1726 aaKnown RBP-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 PARP4Q9UKK3 1724 aaKnown RBP-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 LINC00959A0A1B0GUT2 108 aa-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 MRPS10P82664 201 aaKnown RBP-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 KRTAP8-1Q8IUC2 63 aa-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 FDCSPQ8NFU4 85 aa-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 C12orf57Q99622 126 aa-0.37□□□□□ -2.47
SMAD4-207ENST00000589076 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
SMAD4-207ENST00000589076 ANKRD36A6QL64 1941 aa-0.38□□□□□ -2.47
SMAD4-207ENST00000589076 A0A1B0GWA3 101 aa-0.38□□□□□ -2.47
SMAD4-207ENST00000589076 FAM223BA6NKX1 122 aa-0.38□□□□□ -2.47
SMAD4-207ENST00000589076 CRYM-AS1A6NIL9 109 aa-0.39□□□□□ -2.47
SMAD4-207ENST00000589076 M0R2T5 61 aa-0.39□□□□□ -2.47
SMAD4-207ENST00000589076 SAA2P0DJI9 122 aaPredicted RBP-0.39□□□□□ -2.47
SMAD4-207ENST00000589076 SFTA2Q6UW10 78 aa-0.39□□□□□ -2.47
SMAD4-207ENST00000589076 LINC00587B1AMM8 73 aa-0.4□□□□□ -2.47
SMAD4-207ENST00000589076 SPINK4O60575 86 aa-0.4□□□□□ -2.47
SMAD4-207ENST00000589076 KRTDAPP60985 99 aa-0.4□□□□□ -2.47
SMAD4-207ENST00000589076 GTF2H5Q6ZYL4 71 aa-0.41□□□□□ -2.48
SMAD4-207ENST00000589076 QSER1Q2KHR3 1735 aa-0.41□□□□□ -2.48
SMAD4-207ENST00000589076 NLRP1Q9C000 1473 aa-0.41□□□□□ -2.48
SMAD4-207ENST00000589076 ABCC2Q92887 1545 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 SYS1-DBNDD2H3BUS1 97 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 COX8AP10176 69 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 LCN9Q8WX39 176 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 USMG5Q96IX5 58 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 KIAA1551Q9HCM1 1747 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 FANCAO15360 1455 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 CLTCL1P53675 1640 aa-0.42□□□□□ -2.48
SMAD4-207ENST00000589076 LRRIQ1Q96JM4 1722 aa-0.43□□□□□ -2.48
SMAD4-207ENST00000589076 SNCAP37840 140 aa-0.43□□□□□ -2.48
SMAD4-207ENST00000589076 EFCAB5A4FU69 1503 aa-0.43□□□□□ -2.48
SMAD4-207ENST00000589076 TIAM2Q8IVF5 1701 aa-0.44□□□□□ -2.48
SMAD4-207ENST00000589076 TMEM262E9PQX1 116 aa-0.44□□□□□ -2.48
SMAD4-207ENST00000589076 DEFB105AQ8NG35 78 aa-0.44□□□□□ -2.48
SMAD4-207ENST00000589076 CGREF1Q99674 301 aa-0.44□□□□□ -2.48
SMAD4-207ENST00000589076 CCDC141Q6ZP82 1450 aa-0.44□□□□□ -2.48
SMAD4-207ENST00000589076 CCDC88BA6NC98 1476 aa-0.45□□□□□ -2.48
SMAD4-207ENST00000589076 SEC11AP67812 179 aa-0.45□□□□□ -2.48
SMAD4-207ENST00000589076 DEFB104AQ8WTQ1 72 aa-0.45□□□□□ -2.48
SMAD4-207ENST00000589076 CCDC18Q5T9S5 1454 aa-0.46□□□□□ -2.48
SMAD4-207ENST00000589076 HSD52Q0P140 79 aa-0.46□□□□□ -2.48
SMAD4-207ENST00000589076 KLK9Q2XQG4 91 aa-0.46□□□□□ -2.48
SMAD4-207ENST00000589076 EDC4Q6P2E9 1401 aaKnown RBP-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 MON2Q7Z3U7 1717 aa-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 hADV29S1A0JD25 119 aa-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 MT1BP07438 61 aa-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 MT1HL1P0DM35 61 aa-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 VAMP8Q9BV40 100 aa-0.47□□□□□ -2.48
SMAD4-207ENST00000589076 A0A087WVE0 104 aa-0.48□□□□□ -2.49
SMAD4-207ENST00000589076 C20orf202A1L168 122 aa-0.48□□□□□ -2.49
SMAD4-207ENST00000589076 ATP10BO94823 1461 aa-0.48□□□□□ -2.49
SMAD4-207ENST00000589076 MROH2BQ7Z745 1585 aa-0.49□□□□□ -2.49
SMAD4-207ENST00000589076 KIF1AQ12756 1690 aa-0.49□□□□□ -2.49
SMAD4-207ENST00000589076 KIF20BQ96Q89 1820 aa-0.5□□□□□ -2.49
SMAD4-207ENST00000589076 A0A1B0GU69 56 aa-0.5□□□□□ -2.49
SMAD4-207ENST00000589076 LYNX1G3V0Z9 82 aa-0.5□□□□□ -2.49
SMAD4-207ENST00000589076 NDUFC1O43677 76 aa-0.5□□□□□ -2.49
SMAD4-207ENST00000589076 H3BQF6 201 aa-0.51□□□□□ -2.49
SMAD4-207ENST00000589076 SCRIBQ14160 1630 aa-0.51□□□□□ -2.49
SMAD4-207ENST00000589076 C6orf201Q7Z4U5 140 aa-0.51□□□□□ -2.49
SMAD4-207ENST00000589076 C7orf77A4D0Y5 90 aa-0.52□□□□□ -2.49
SMAD4-207ENST00000589076 KRTAP19-7Q3SYF9 63 aa-0.52□□□□□ -2.49
SMAD4-207ENST00000589076 CACFD1Q9UGQ2 172 aa-0.52□□□□□ -2.49
SMAD4-207ENST00000589076 APLNQ9ULZ1 77 aa-0.52□□□□□ -2.49
SMAD4-207ENST00000589076 CLTCQ00610 1675 aaKnown RBP-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 ABCA5Q8WWZ7 1642 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 ABCC3O15438 1527 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 TRBV25-1A0A075B6N4 114 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 A0A0G2JND7 137 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 PMCHL1Q16048 86 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 PSMG4Q5JS54 123 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 SAMD9LQ8IVG5 1584 aa-0.53□□□□□ -2.49
SMAD4-207ENST00000589076 RGPD2P0DJD1 1756 aa-0.54□□□□□ -2.5
SMAD4-207ENST00000589076 CPSF4LA6NMK7 179 aaKnown RBP-0.54□□□□□ -2.5
SMAD4-207ENST00000589076 H0Y9P7 68 aa-0.54□□□□□ -2.5
SMAD4-207ENST00000589076 HFM1A2PYH4 1435 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 DEPDC5O75140 1603 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 GNGT2O14610 69 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 KRTAP19-2Q3LHN2 52 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 CRIPTQ9P021 101 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 FYCO1Q9BQS8 1478 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 RICTORQ6R327 1708 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 DDX60Q8IY21 1712 aaKnown RBP-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 CRYBG1Q9Y4K1 1723 aa-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 TROQ12816 1431 aaPredicted RBP-0.55□□□□□ -2.5
SMAD4-207ENST00000589076 MPC2O95563 127 aa-0.56□□□□□ -2.5
SMAD4-207ENST00000589076 S100PP25815 95 aa-0.56□□□□□ -2.5
SMAD4-207ENST00000589076 DEFB107AQ8IZN7 70 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms