RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SCXQ7RTU7 201 aa9□□□□□ -0.97
NEDD4L-223ENST00000588516 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
NEDD4L-223ENST00000588516 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
NEDD4L-223ENST00000588516 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
NEDD4L-223ENST00000588516 PSCAO43653 123 aa8.99□□□□□ -0.97
NEDD4L-223ENST00000588516 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
NEDD4L-223ENST00000588516 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
NEDD4L-223ENST00000588516 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
NEDD4L-223ENST00000588516 H7BZZ5 65 aa8.97□□□□□ -0.97
NEDD4L-223ENST00000588516 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
NEDD4L-223ENST00000588516 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
NEDD4L-223ENST00000588516 H0Y9J4 135 aa8.94□□□□□ -0.98
NEDD4L-223ENST00000588516 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
NEDD4L-223ENST00000588516 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
NEDD4L-223ENST00000588516 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
NEDD4L-223ENST00000588516 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
NEDD4L-223ENST00000588516 OCR1Q9BZK8 76 aa8.92□□□□□ -0.98
NEDD4L-223ENST00000588516 EPM2AB3EWF7 344 aa8.89□□□□□ -0.99
NEDD4L-223ENST00000588516 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
NEDD4L-223ENST00000588516 APLNQ9ULZ1 77 aa8.89□□□□□ -0.99
NEDD4L-223ENST00000588516 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
NEDD4L-223ENST00000588516 A0A096LNI7 61 aa8.88□□□□□ -0.99
NEDD4L-223ENST00000588516 HECTD4Q9Y4D8 3996 aa8.88□□□□□ -0.99
NEDD4L-223ENST00000588516 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
NEDD4L-223ENST00000588516 SMIM29Q86T20 159 aa8.87□□□□□ -0.99
NEDD4L-223ENST00000588516 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
NEDD4L-223ENST00000588516 SMIM26A0A096LP01 95 aa8.86□□□□□ -0.99
NEDD4L-223ENST00000588516 SPRR1BP22528 89 aa8.86□□□□□ -0.99
NEDD4L-223ENST00000588516 UBE2AP49459 152 aa8.86□□□□□ -0.99
NEDD4L-223ENST00000588516 Q8N9L7 120 aa8.86□□□□□ -0.99
NEDD4L-223ENST00000588516 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
NEDD4L-223ENST00000588516 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
NEDD4L-223ENST00000588516 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
NEDD4L-223ENST00000588516 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
NEDD4L-223ENST00000588516 IGFL1Q6UW32 110 aa8.83□□□□□ -1
NEDD4L-223ENST00000588516 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
NEDD4L-223ENST00000588516 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
NEDD4L-223ENST00000588516 A0A1W2PNN7 141 aa8.82□□□□□ -1
NEDD4L-223ENST00000588516 HCG22E2RYF7 251 aa8.82□□□□□ -1
NEDD4L-223ENST00000588516 HIGD2AQ9BW72 106 aa8.82□□□□□ -1
NEDD4L-223ENST00000588516 DSCR10P59022 87 aa8.81□□□□□ -1
NEDD4L-223ENST00000588516 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
NEDD4L-223ENST00000588516 NBDYA0A0U1RRE5 68 aa8.8□□□□□ -1
NEDD4L-223ENST00000588516 PRLHP81277 87 aa8.8□□□□□ -1
NEDD4L-223ENST00000588516 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
NEDD4L-223ENST00000588516 NDUFB1O75438 58 aa8.79□□□□□ -1
NEDD4L-223ENST00000588516 OXTP01178 125 aa8.79□□□□□ -1
NEDD4L-223ENST00000588516 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
NEDD4L-223ENST00000588516 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
NEDD4L-223ENST00000588516 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
NEDD4L-223ENST00000588516 H3BPC8 53 aa8.77□□□□□ -1.01
NEDD4L-223ENST00000588516 K7EQZ3 153 aa8.76□□□□□ -1.01
NEDD4L-223ENST00000588516 MP68P56378 58 aa8.76□□□□□ -1.01
NEDD4L-223ENST00000588516 Q5XG85 94 aa8.76□□□□□ -1.01
NEDD4L-223ENST00000588516 A0A087WSZ3 146 aa8.75□□□□□ -1.01
NEDD4L-223ENST00000588516 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
NEDD4L-223ENST00000588516 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
NEDD4L-223ENST00000588516 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
NEDD4L-223ENST00000588516 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
NEDD4L-223ENST00000588516 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
NEDD4L-223ENST00000588516 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
NEDD4L-223ENST00000588516 A8MWP4 228 aa8.7□□□□□ -1.02
NEDD4L-223ENST00000588516 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
NEDD4L-223ENST00000588516 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
NEDD4L-223ENST00000588516 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
NEDD4L-223ENST00000588516 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
NEDD4L-223ENST00000588516 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
NEDD4L-223ENST00000588516 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
NEDD4L-223ENST00000588516 HRCT1Q6UXD1 115 aa8.67□□□□□ -1.02
NEDD4L-223ENST00000588516 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
NEDD4L-223ENST00000588516 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
NEDD4L-223ENST00000588516 VPS13DQ5THJ4 4388 aa8.67□□□□□ -1.02
NEDD4L-223ENST00000588516 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
NEDD4L-223ENST00000588516 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
NEDD4L-223ENST00000588516 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
NEDD4L-223ENST00000588516 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
NEDD4L-223ENST00000588516 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
NEDD4L-223ENST00000588516 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
NEDD4L-223ENST00000588516 PKHD1P08F94 4074 aa8.65□□□□□ -1.03
NEDD4L-223ENST00000588516 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
NEDD4L-223ENST00000588516 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
NEDD4L-223ENST00000588516 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
NEDD4L-223ENST00000588516 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
NEDD4L-223ENST00000588516 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
NEDD4L-223ENST00000588516 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
NEDD4L-223ENST00000588516 HERC1Q15751 4861 aa8.61□□□□□ -1.03
NEDD4L-223ENST00000588516 A0A087WTM6 91 aa8.6□□□□□ -1.03
NEDD4L-223ENST00000588516 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
NEDD4L-223ENST00000588516 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
NEDD4L-223ENST00000588516 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
NEDD4L-223ENST00000588516 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 H0Y9P7 68 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 J3QL48 77 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 MOBPQ13875 183 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 V9GYY9 64 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
NEDD4L-223ENST00000588516 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
NEDD4L-223ENST00000588516 CDK2AP2O75956 126 aa8.57□□□□□ -1.04
NEDD4L-223ENST00000588516 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms