RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 FAT1Q14517 4588 aa6.25□□□□□ -1.41
APOC1-201ENST00000586638 J3QL48 77 aa6.25□□□□□ -1.41
APOC1-201ENST00000586638 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
APOC1-201ENST00000586638 Q8N377 158 aa6.25□□□□□ -1.41
APOC1-201ENST00000586638 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
APOC1-201ENST00000586638 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
APOC1-201ENST00000586638 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
APOC1-201ENST00000586638 H0Y9J4 135 aa6.24□□□□□ -1.41
APOC1-201ENST00000586638 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
APOC1-201ENST00000586638 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
APOC1-201ENST00000586638 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
APOC1-201ENST00000586638 GHRHP01286 108 aa6.23□□□□□ -1.41
APOC1-201ENST00000586638 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
APOC1-201ENST00000586638 VPS25Q9BRG1 176 aa6.23□□□□□ -1.41
APOC1-201ENST00000586638 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.42
APOC1-201ENST00000586638 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
APOC1-201ENST00000586638 Q6ZQT0 140 aa6.2□□□□□ -1.42
APOC1-201ENST00000586638 LOC110117498A0A087WWA1 95 aa6.19□□□□□ -1.42
APOC1-201ENST00000586638 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
APOC1-201ENST00000586638 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
APOC1-201ENST00000586638 SMIM29Q86T20 159 aa6.19□□□□□ -1.42
APOC1-201ENST00000586638 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
APOC1-201ENST00000586638 IGLV7-43P04211 117 aa6.18□□□□□ -1.42
APOC1-201ENST00000586638 CCKP06307 115 aa6.18□□□□□ -1.42
APOC1-201ENST00000586638 DSCR8Q96T75 97 aa6.18□□□□□ -1.42
APOC1-201ENST00000586638 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
APOC1-201ENST00000586638 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
APOC1-201ENST00000586638 ZNF861PO60384 105 aa6.17□□□□□ -1.42
APOC1-201ENST00000586638 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
APOC1-201ENST00000586638 F8WEM9 126 aa6.16□□□□□ -1.42
APOC1-201ENST00000586638 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
APOC1-201ENST00000586638 SPRR1BP22528 89 aa6.16□□□□□ -1.42
APOC1-201ENST00000586638 ACYP1P07311 99 aa6.15□□□□□ -1.42
APOC1-201ENST00000586638 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
APOC1-201ENST00000586638 LINC00846Q9NV44 126 aa6.14□□□□□ -1.43
APOC1-201ENST00000586638 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
APOC1-201ENST00000586638 MT-ATP8P03928 68 aa6.13□□□□□ -1.43
APOC1-201ENST00000586638 PDE6GP18545 87 aa6.13□□□□□ -1.43
APOC1-201ENST00000586638 LINC00483Q53H64 154 aa6.12□□□□□ -1.43
APOC1-201ENST00000586638 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
APOC1-201ENST00000586638 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
APOC1-201ENST00000586638 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
APOC1-201ENST00000586638 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
APOC1-201ENST00000586638 RPL37AP61513 92 aaKnown RBP6.11□□□□□ -1.43
APOC1-201ENST00000586638 IGLV9-49A0A0B4J1Y8 123 aa6.1□□□□□ -1.43
APOC1-201ENST00000586638 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
APOC1-201ENST00000586638 Q8NBF4 154 aa6.1□□□□□ -1.43
APOC1-201ENST00000586638 C21orf62-AS1Q17RA5 79 aa6.09□□□□□ -1.43
APOC1-201ENST00000586638 OXTP01178 125 aa6.08□□□□□ -1.44
APOC1-201ENST00000586638 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
APOC1-201ENST00000586638 MOBPQ13875 183 aa6.07□□□□□ -1.44
APOC1-201ENST00000586638 Q6JHZ5 121 aa6.07□□□□□ -1.44
APOC1-201ENST00000586638 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
APOC1-201ENST00000586638 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
APOC1-201ENST00000586638 Q6ZVQ6 151 aa6.06□□□□□ -1.44
APOC1-201ENST00000586638 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
APOC1-201ENST00000586638 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
APOC1-201ENST00000586638 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
APOC1-201ENST00000586638 A0A087WSZ3 146 aa6.02□□□□□ -1.45
APOC1-201ENST00000586638 A0A087X002 238 aa6.02□□□□□ -1.45
APOC1-201ENST00000586638 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
APOC1-201ENST00000586638 CRYGAP11844 174 aa6.02□□□□□ -1.45
APOC1-201ENST00000586638 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
APOC1-201ENST00000586638 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
APOC1-201ENST00000586638 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
APOC1-201ENST00000586638 Q6Q795 121 aa6.01□□□□□ -1.45
APOC1-201ENST00000586638 HRCT1Q6UXD1 115 aa6.01□□□□□ -1.45
APOC1-201ENST00000586638 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
APOC1-201ENST00000586638 NREPQ16612 68 aa6□□□□□ -1.45
APOC1-201ENST00000586638 KRTAP13-2Q52LG2 175 aa6□□□□□ -1.45
APOC1-201ENST00000586638 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
APOC1-201ENST00000586638 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
APOC1-201ENST00000586638 A0A1B0GW54 56 aa5.99□□□□□ -1.45
APOC1-201ENST00000586638 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
APOC1-201ENST00000586638 A0A087WVE0 104 aa5.97□□□□□ -1.45
APOC1-201ENST00000586638 BPY2O14599 106 aa5.95□□□□□ -1.46
APOC1-201ENST00000586638 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
APOC1-201ENST00000586638 CXCL6P80162 114 aa5.95□□□□□ -1.46
APOC1-201ENST00000586638 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
APOC1-201ENST00000586638 Q8N9L7 120 aa5.95□□□□□ -1.46
APOC1-201ENST00000586638 LRP2P98164 4655 aa5.95□□□□□ -1.46
APOC1-201ENST00000586638 SCGB1A1P11684 91 aa5.94□□□□□ -1.46
APOC1-201ENST00000586638 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
APOC1-201ENST00000586638 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
APOC1-201ENST00000586638 FAM236AA0A1B0GUQ0 79 aa5.93□□□□□ -1.46
APOC1-201ENST00000586638 FAM236BA0A1B0GV22 79 aa5.93□□□□□ -1.46
APOC1-201ENST00000586638 IGKV4-1P06312 121 aa5.93□□□□□ -1.46
APOC1-201ENST00000586638 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
APOC1-201ENST00000586638 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
APOC1-201ENST00000586638 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
APOC1-201ENST00000586638 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
APOC1-201ENST00000586638 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
APOC1-201ENST00000586638 DSCR10P59022 87 aa5.91□□□□□ -1.46
APOC1-201ENST00000586638 CD164Q04900 197 aa5.91□□□□□ -1.46
APOC1-201ENST00000586638 Q96NJ1 140 aa5.91□□□□□ -1.46
APOC1-201ENST00000586638 SS18L2Q9UHA2 77 aa5.91□□□□□ -1.46
APOC1-201ENST00000586638 LINC00472Q9H8W2 130 aa5.9□□□□□ -1.46
APOC1-201ENST00000586638 K7EQZ3 153 aa5.89□□□□□ -1.47
APOC1-201ENST00000586638 PCP4P48539 62 aa5.86□□□□□ -1.47
APOC1-201ENST00000586638 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms