RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 BAHCC1Q9P281 2608 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 ABCA2Q9BZC7 2435 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 A0A0D9SG42 100 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 H3BUX3 64 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 DEFB119Q8N690 84 aa0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 NOP10Q9NPE3 64 aaKnown RBP0.82□□□□□ -2.28
NEDD4L-212ENST00000585594 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 SPRR5A0A1B0GTR4 108 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 KRTAP13-4Q3LI77 160 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 ROS1P08922 2347 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 ACACAQ13085 2346 aa0.81□□□□□ -2.28
NEDD4L-212ENST00000585594 EP300Q09472 2414 aaPredicted RBP0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 NAV2Q8IVL1 2488 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 TRANK1O15050 2925 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 CSPG4Q6UVK1 2322 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 A0A0C4DFX4 3053 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 A0A1B0GVY2 172 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 LCE1EQ5T753 118 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 Q5VSD8 79 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 CEP290O15078 2479 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 PKD1L2Q7Z442 2459 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 HMCN1Q96RW7 5635 aa0.8□□□□□ -2.28
NEDD4L-212ENST00000585594 C2CD3Q4AC94 2353 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 RIF1Q5UIP0 2472 aaKnown RBP0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 CHD6Q8TD26 2715 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 KRTAP1-4P0C5Y4 121 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 CD52P31358 61 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 KRTAP10-11P60412 298 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 DEFB136Q30KP8 78 aa0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 MAP1BP46821 2468 aaKnown RBP0.79□□□□□ -2.28
NEDD4L-212ENST00000585594 DEFB103AP81534 67 aa0.78□□□□□ -2.28
NEDD4L-212ENST00000585594 KRTAP2-2Q9BYT5 123 aa0.78□□□□□ -2.28
NEDD4L-212ENST00000585594 REV3LO60673 3130 aa0.78□□□□□ -2.28
NEDD4L-212ENST00000585594 SPTBN4Q9H254 2564 aa0.78□□□□□ -2.28
NEDD4L-212ENST00000585594 BDP1A6H8Y1 2624 aa0.78□□□□□ -2.29
NEDD4L-212ENST00000585594 SRRM2Q9UQ35 2752 aaKnown RBP0.78□□□□□ -2.29
NEDD4L-212ENST00000585594 F8P00451 2351 aa0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 MUC6Q6W4X9 2439 aa0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 A0A096LNI7 61 aa0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 KRTAP12-1P59990 96 aa0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 NBASA2RRP1 2371 aa0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 UBR5O95071 2799 aaPredicted RBP0.77□□□□□ -2.29
NEDD4L-212ENST00000585594 M0QZ58 72 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 KRTAP10-1P60331 282 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 Q9Y3F1 56 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 MGAQ8IWI9 3026 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 NCOR2Q9Y618 2525 aa0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
NEDD4L-212ENST00000585594 CHD7Q9P2D1 2997 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 SETD2Q9BYW2 2564 aaPredicted RBP0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 A0A096LPF7 62 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 KRTAP10-3P60369 221 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 CRYBG3Q68DQ2 2970 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 AKAP13Q12802 2813 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 ZNF292O60281 2723 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 ANKHD1Q8IWZ3 2542 aaKnown RBP0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
NEDD4L-212ENST00000585594 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 APC2O95996 2303 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 MT3P25713 68 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 ATRQ13535 2644 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 USP9YO00507 2555 aaPredicted RBP0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
NEDD4L-212ENST00000585594 ASH1LQ9NR48 2969 aaKnown RBP0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 POLQO75417 2590 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 TTC28Q96AY4 2481 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 KRTAP5-8O75690 187 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 DEFB133Q30KQ1 61 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 LCE1AQ5T7P2 110 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 NOTCH3Q9UM47 2321 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 RP1L1Q8IWN7 2480 aaPredicted RBP0.73□□□□□ -2.29
NEDD4L-212ENST00000585594 HELZ2Q9BYK8 2649 aaKnown RBP0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 MAP1AP78559 2803 aaPredicted RBP0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 CACNA1AO00555 2505 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 LRRK2Q5S007 2527 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 UTP20O75691 2785 aaKnown RBP0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 ITPR1Q14643 2758 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 KRTAP10-10P60014 251 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 FBN1P35555 2871 aaKnown RBP0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 PRRC2CQ9Y520 2896 aaKnown RBP0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 VWFP04275 2813 aa0.72□□□□□ -2.29
NEDD4L-212ENST00000585594 PTPN13Q12923 2485 aa0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 SPART-AS1P0CW21 52 aa0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 KRTAP13-1Q8IUC0 172 aa0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 ZFYVE26Q68DK2 2539 aa0.71□□□□□ -2.3
NEDD4L-212ENST00000585594 HIVEP3Q5T1R4 2406 aa0.7□□□□□ -2.3
NEDD4L-212ENST00000585594 LINC01556Q5JQF7 62 aa0.7□□□□□ -2.3
NEDD4L-212ENST00000585594 LCE1FQ5T754 118 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms