RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.66
CDH8-214ENST00000585315 HIVEP1P15822 2718 aa4.65□□□□□ -1.67
CDH8-214ENST00000585315 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
CDH8-214ENST00000585315 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
CDH8-214ENST00000585315 NIPBLQ6KC79 2804 aaeCLIP4.64□□□□□ -1.67
CDH8-214ENST00000585315 KRTAP10-11P60412 298 aa4.64□□□□□ -1.67
CDH8-214ENST00000585315 CHD7Q9P2D1 2997 aa4.64□□□□□ -1.67
CDH8-214ENST00000585315 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
CDH8-214ENST00000585315 SPRR1AP35321 89 aa4.64□□□□□ -1.67
CDH8-214ENST00000585315 A0A1B0GU33 70 aa4.63□□□□□ -1.67
CDH8-214ENST00000585315 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
CDH8-214ENST00000585315 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
CDH8-214ENST00000585315 APCP25054 2843 aa4.62□□□□□ -1.67
CDH8-214ENST00000585315 FREM2Q5SZK8 3169 aa4.62□□□□□ -1.67
CDH8-214ENST00000585315 CHD9Q3L8U1 2897 aa4.62□□□□□ -1.67
CDH8-214ENST00000585315 SPRR1BP22528 89 aa4.61□□□□□ -1.67
CDH8-214ENST00000585315 Q5XG85 94 aa4.61□□□□□ -1.67
CDH8-214ENST00000585315 FRYQ5TBA9 3013 aa4.61□□□□□ -1.67
CDH8-214ENST00000585315 FP248Q71RG6 208 aaPredicted RBP4.61□□□□□ -1.67
CDH8-214ENST00000585315 HRES1P13985 223 aa4.6□□□□□ -1.67
CDH8-214ENST00000585315 J3QL48 77 aa4.6□□□□□ -1.67
CDH8-214ENST00000585315 Q8N1X5 172 aa4.6□□□□□ -1.67
CDH8-214ENST00000585315 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
CDH8-214ENST00000585315 ANAPC11Q9NYG5 84 aa4.58□□□□□ -1.68
CDH8-214ENST00000585315 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
CDH8-214ENST00000585315 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
CDH8-214ENST00000585315 TNP2Q05952 138 aa4.58□□□□□ -1.68
CDH8-214ENST00000585315 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
CDH8-214ENST00000585315 TENM3Q9P273 2699 aa4.57□□□□□ -1.68
CDH8-214ENST00000585315 LINC00472Q9H8W2 130 aa4.57□□□□□ -1.68
CDH8-214ENST00000585315 CASC10Q5T4H9 136 aa4.57□□□□□ -1.68
CDH8-214ENST00000585315 FRYLO94915 3013 aa4.56□□□□□ -1.68
CDH8-214ENST00000585315 A0A0D9SG42 100 aa4.56□□□□□ -1.68
CDH8-214ENST00000585315 KRTAP10-3P60369 221 aa4.56□□□□□ -1.68
CDH8-214ENST00000585315 Q5VV11 94 aa4.55□□□□□ -1.68
CDH8-214ENST00000585315 NBEAQ8NFP9 2946 aa4.55□□□□□ -1.68
CDH8-214ENST00000585315 RANBP2P49792 3224 aaKnown RBP4.54□□□□□ -1.68
CDH8-214ENST00000585315 LINC00483Q53H64 154 aa4.54□□□□□ -1.68
CDH8-214ENST00000585315 KRTAP1-3Q8IUG1 177 aa4.54□□□□□ -1.68
CDH8-214ENST00000585315 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
CDH8-214ENST00000585315 ZCCHC13Q8WW36 166 aaKnown RBP4.53□□□□□ -1.68
CDH8-214ENST00000585315 PLAC8Q9NZF1 115 aa4.53□□□□□ -1.68
CDH8-214ENST00000585315 WDFY4Q6ZS81 3184 aa4.53□□□□□ -1.68
CDH8-214ENST00000585315 PRUNE2Q8WUY3 3088 aa4.53□□□□□ -1.68
CDH8-214ENST00000585315 ASH1LQ9NR48 2969 aaKnown RBP4.52□□□□□ -1.69
CDH8-214ENST00000585315 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
CDH8-214ENST00000585315 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
CDH8-214ENST00000585315 LRBAP50851 2863 aa4.52□□□□□ -1.69
CDH8-214ENST00000585315 Q6ZSA8 131 aa4.51□□□□□ -1.69
CDH8-214ENST00000585315 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CDH8-214ENST00000585315 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
CDH8-214ENST00000585315 KALRNO60229 2985 aa4.51□□□□□ -1.69
CDH8-214ENST00000585315 XIRP2A4UGR9 3374 aa4.49□□□□□ -1.69
CDH8-214ENST00000585315 Q5W150 140 aa4.49□□□□□ -1.69
CDH8-214ENST00000585315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
CDH8-214ENST00000585315 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
CDH8-214ENST00000585315 Q8NDZ9 215 aa4.48□□□□□ -1.69
CDH8-214ENST00000585315 UNC80Q8N2C7 3258 aa4.47□□□□□ -1.69
CDH8-214ENST00000585315 Q6ZR54 194 aa4.47□□□□□ -1.69
CDH8-214ENST00000585315 CELSR2Q9HCU4 2923 aa4.47□□□□□ -1.69
CDH8-214ENST00000585315 DMXL2Q8TDJ6 3036 aa4.47□□□□□ -1.69
CDH8-214ENST00000585315 MKI67P46013 3256 aaKnown RBP4.46□□□□□ -1.69
CDH8-214ENST00000585315 RPL37P61927 97 aaKnown RBP4.46□□□□□ -1.7
CDH8-214ENST00000585315 NF1P21359 2839 aa4.46□□□□□ -1.7
CDH8-214ENST00000585315 TACC2O95359 2948 aa4.45□□□□□ -1.7
CDH8-214ENST00000585315 SPINK7P58062 85 aa4.45□□□□□ -1.7
CDH8-214ENST00000585315 H3BS24 57 aa4.45□□□□□ -1.7
CDH8-214ENST00000585315 TENM4Q6N022 2769 aa4.45□□□□□ -1.7
CDH8-214ENST00000585315 LAMA3Q16787 3333 aa4.45□□□□□ -1.7
CDH8-214ENST00000585315 OXTP01178 125 aa4.43□□□□□ -1.7
CDH8-214ENST00000585315 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
CDH8-214ENST00000585315 KRTAP4-16G5E9R7 235 aaPredicted RBP4.42□□□□□ -1.7
CDH8-214ENST00000585315 R4GN34 69 aa4.42□□□□□ -1.7
CDH8-214ENST00000585315 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
CDH8-214ENST00000585315 S4R3F8 94 aa4.42□□□□□ -1.7
CDH8-214ENST00000585315 KRTAP26-1Q6PEX3 210 aa4.42□□□□□ -1.7
CDH8-214ENST00000585315 ROMO1P60602 79 aa4.41□□□□□ -1.7
CDH8-214ENST00000585315 CELSR3Q9NYQ7 3312 aa4.41□□□□□ -1.7
CDH8-214ENST00000585315 BRCA2P51587 3418 aa4.4□□□□□ -1.7
CDH8-214ENST00000585315 HTTP42858 3142 aa4.4□□□□□ -1.71
CDH8-214ENST00000585315 COL12A1Q99715 3063 aa4.39□□□□□ -1.71
CDH8-214ENST00000585315 ZZEF1O43149 2961 aa4.39□□□□□ -1.71
CDH8-214ENST00000585315 REV3LO60673 3130 aa4.38□□□□□ -1.71
CDH8-214ENST00000585315 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
CDH8-214ENST00000585315 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
CDH8-214ENST00000585315 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
CDH8-214ENST00000585315 LAMA1P25391 3075 aa4.37□□□□□ -1.71
CDH8-214ENST00000585315 LCE6AA0A183 80 aa4.37□□□□□ -1.71
CDH8-214ENST00000585315 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
CDH8-214ENST00000585315 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
CDH8-214ENST00000585315 ZANQ9Y493 2812 aa4.36□□□□□ -1.71
CDH8-214ENST00000585315 A0A087X002 238 aa4.36□□□□□ -1.71
CDH8-214ENST00000585315 KRTAP1-5Q9BYS1 174 aa4.34□□□□□ -1.71
CDH8-214ENST00000585315 CRYBG3Q68DQ2 2970 aa4.33□□□□□ -1.72
CDH8-214ENST00000585315 PANO1I0J062 215 aa4.33□□□□□ -1.72
CDH8-214ENST00000585315 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
CDH8-214ENST00000585315 BOD1L1Q8NFC6 3051 aa4.31□□□□□ -1.72
CDH8-214ENST00000585315 ADGRG4Q8IZF6 3080 aa4.31□□□□□ -1.72
CDH8-214ENST00000585315 M0R2T5 61 aa4.31□□□□□ -1.72
CDH8-214ENST00000585315 ATMQ13315 3056 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms