RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 Q6ZQT0 140 aa3.67□□□□□ -1.82
RNU4ATAC-201ENST00000580972 VPS25Q9BRG1 176 aa3.67□□□□□ -1.82
RNU4ATAC-201ENST00000580972 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 MOBPQ13875 183 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 IGFL1Q6UW32 110 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 CDIP1Q9H305 208 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 FAT1Q14517 4588 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 RYR1P21817 5038 aa3.66□□□□□ -1.82
RNU4ATAC-201ENST00000580972 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 A0A087X002 238 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 CCKP06307 115 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 KRTAP13-2Q52LG2 175 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
RNU4ATAC-201ENST00000580972 HSPG2P98160 4391 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 F8WEM9 126 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 H3BQ85 93 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 K7ERU9 68 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 CDK2AP2O75956 126 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 Q5VSD8 79 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 DSCR8Q96T75 97 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 LINC00846Q9NV44 126 aa3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
RNU4ATAC-201ENST00000580972 PRR26Q8N8Z3 221 aa3.62□□□□□ -1.83
RNU4ATAC-201ENST00000580972 Q8NBF4 154 aa3.62□□□□□ -1.83
RNU4ATAC-201ENST00000580972 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
RNU4ATAC-201ENST00000580972 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
RNU4ATAC-201ENST00000580972 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
RNU4ATAC-201ENST00000580972 J3QR89 54 aa3.61□□□□□ -1.83
RNU4ATAC-201ENST00000580972 GHRHP01286 108 aa3.61□□□□□ -1.83
RNU4ATAC-201ENST00000580972 MT-ATP8P03928 68 aa3.61□□□□□ -1.83
RNU4ATAC-201ENST00000580972 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
RNU4ATAC-201ENST00000580972 A0A087WSZ3 146 aa3.6□□□□□ -1.83
RNU4ATAC-201ENST00000580972 IGKV3D-7A0A0C4DH55 119 aa3.6□□□□□ -1.83
RNU4ATAC-201ENST00000580972 FAM240AA0A1B0GVK7 77 aa3.6□□□□□ -1.83
RNU4ATAC-201ENST00000580972 FAM229AH3BQW9 127 aa3.6□□□□□ -1.83
RNU4ATAC-201ENST00000580972 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
RNU4ATAC-201ENST00000580972 PLA2G1BP04054 148 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC-201ENST00000580972 Q6JHZ5 121 aa3.59□□□□□ -1.83
RNU4ATAC-201ENST00000580972 Q6ZVQ6 151 aa3.59□□□□□ -1.83
RNU4ATAC-201ENST00000580972 CRYGAP11844 174 aa3.58□□□□□ -1.84
RNU4ATAC-201ENST00000580972 PDE6GP18545 87 aa3.58□□□□□ -1.84
RNU4ATAC-201ENST00000580972 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
RNU4ATAC-201ENST00000580972 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
RNU4ATAC-201ENST00000580972 Q8N1X5 172 aa3.58□□□□□ -1.84
RNU4ATAC-201ENST00000580972 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
RNU4ATAC-201ENST00000580972 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
RNU4ATAC-201ENST00000580972 ACYP1P07311 99 aa3.57□□□□□ -1.84
RNU4ATAC-201ENST00000580972 Q8N9L7 120 aa3.57□□□□□ -1.84
RNU4ATAC-201ENST00000580972 PKHD1L1Q86WI1 4243 aa3.56□□□□□ -1.84
RNU4ATAC-201ENST00000580972 TYMSOSQ8TAI1 123 aa3.56□□□□□ -1.84
RNU4ATAC-201ENST00000580972 BPY2O14599 106 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 NREPQ16612 68 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 Q6Q795 121 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 SSBP3-AS1Q7Z2R9 100 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 UBL5Q9BZL1 73 aa3.55□□□□□ -1.84
RNU4ATAC-201ENST00000580972 A0A087WVE0 104 aa3.54□□□□□ -1.84
RNU4ATAC-201ENST00000580972 Q96NJ1 140 aa3.54□□□□□ -1.84
RNU4ATAC-201ENST00000580972 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
RNU4ATAC-201ENST00000580972 HERC2O95714 4834 aa3.54□□□□□ -1.84
RNU4ATAC-201ENST00000580972 DSCR10P59022 87 aa3.53□□□□□ -1.84
RNU4ATAC-201ENST00000580972 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
RNU4ATAC-201ENST00000580972 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
RNU4ATAC-201ENST00000580972 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
RNU4ATAC-201ENST00000580972 K7EQZ3 153 aa3.51□□□□□ -1.85
RNU4ATAC-201ENST00000580972 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
RNU4ATAC-201ENST00000580972 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
RNU4ATAC-201ENST00000580972 CD164Q04900 197 aa3.51□□□□□ -1.85
RNU4ATAC-201ENST00000580972 HIST1H4AP62805 103 aaKnown RBP3.5□□□□□ -1.85
RNU4ATAC-201ENST00000580972 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
RNU4ATAC-201ENST00000580972 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
RNU4ATAC-201ENST00000580972 LRP1Q07954 4544 aaKnown RBP3.5□□□□□ -1.85
RNU4ATAC-201ENST00000580972 A0A1B0GW54 56 aa3.49□□□□□ -1.85
RNU4ATAC-201ENST00000580972 C21orf62-AS1Q17RA5 79 aa3.49□□□□□ -1.85
RNU4ATAC-201ENST00000580972 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
RNU4ATAC-201ENST00000580972 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
RNU4ATAC-201ENST00000580972 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
RNU4ATAC-201ENST00000580972 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
RNU4ATAC-201ENST00000580972 CXCL6P80162 114 aa3.48□□□□□ -1.85
RNU4ATAC-201ENST00000580972 C4orf48Q5BLP8 95 aa3.48□□□□□ -1.85
RNU4ATAC-201ENST00000580972 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 FAM236AA0A1B0GUQ0 79 aa3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 FAM236BA0A1B0GV22 79 aa3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 SPINK1P00995 79 aa3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 SS18L2Q9UHA2 77 aa3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 TNXBP22105 4242 aa3.47□□□□□ -1.85
RNU4ATAC-201ENST00000580972 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
RNU4ATAC-201ENST00000580972 A8MWP4 228 aa3.46□□□□□ -1.86
RNU4ATAC-201ENST00000580972 Q5XG85 94 aa3.46□□□□□ -1.86
RNU4ATAC-201ENST00000580972 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
RNU4ATAC-201ENST00000580972 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
RNU4ATAC-201ENST00000580972 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
RNU4ATAC-201ENST00000580972 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
RNU4ATAC-201ENST00000580972 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
RNU4ATAC-201ENST00000580972 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms