RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 H0Y8G0 127 aa6.29□□□□□ -1.4
CSNK1D-213ENST00000580446 LINC00614P0C842 121 aa6.29□□□□□ -1.4
CSNK1D-213ENST00000580446 S100A1P23297 94 aa6.29□□□□□ -1.4
CSNK1D-213ENST00000580446 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
CSNK1D-213ENST00000580446 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
CSNK1D-213ENST00000580446 IFITM2Q01629 132 aa6.27□□□□□ -1.41
CSNK1D-213ENST00000580446 Q6JHZ5 121 aa6.27□□□□□ -1.41
CSNK1D-213ENST00000580446 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
CSNK1D-213ENST00000580446 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
CSNK1D-213ENST00000580446 A0A0J9YXY3 114 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 SPINK7P58062 85 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
CSNK1D-213ENST00000580446 COLCA2A8K830 154 aa6.25□□□□□ -1.41
CSNK1D-213ENST00000580446 SLC7A5P1Q8MH63 180 aa6.25□□□□□ -1.41
CSNK1D-213ENST00000580446 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
CSNK1D-213ENST00000580446 H3BUT2 72 aa6.24□□□□□ -1.41
CSNK1D-213ENST00000580446 LINC00313P59037 77 aa6.23□□□□□ -1.41
CSNK1D-213ENST00000580446 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 OCIAD2Q56VL3 154 aa6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
CSNK1D-213ENST00000580446 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
CSNK1D-213ENST00000580446 NMUP48645 174 aa6.2□□□□□ -1.42
CSNK1D-213ENST00000580446 FAM218AQ96MZ4 157 aa6.2□□□□□ -1.42
CSNK1D-213ENST00000580446 LITAFQ99732 161 aa6.2□□□□□ -1.42
CSNK1D-213ENST00000580446 TRAV13-2A0A0B4J235 113 aa6.18□□□□□ -1.42
CSNK1D-213ENST00000580446 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
CSNK1D-213ENST00000580446 SERF1AO75920 110 aa6.17□□□□□ -1.42
CSNK1D-213ENST00000580446 FAM236AA0A1B0GUQ0 79 aa6.16□□□□□ -1.42
CSNK1D-213ENST00000580446 FAM236BA0A1B0GV22 79 aa6.16□□□□□ -1.42
CSNK1D-213ENST00000580446 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
CSNK1D-213ENST00000580446 A0A087WSZ3 146 aa6.15□□□□□ -1.42
CSNK1D-213ENST00000580446 Q6ZQY7 126 aa6.15□□□□□ -1.42
CSNK1D-213ENST00000580446 A6NDN8 102 aa6.13□□□□□ -1.43
CSNK1D-213ENST00000580446 HERVK_113P61574 105 aa6.13□□□□□ -1.43
CSNK1D-213ENST00000580446 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
CSNK1D-213ENST00000580446 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
CSNK1D-213ENST00000580446 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
CSNK1D-213ENST00000580446 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
CSNK1D-213ENST00000580446 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
CSNK1D-213ENST00000580446 S100PP25815 95 aa6.09□□□□□ -1.43
CSNK1D-213ENST00000580446 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
CSNK1D-213ENST00000580446 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 A4D1N5 150 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 SMIM11BQ8TCY0 68 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
CSNK1D-213ENST00000580446 PLNP26678 52 aa6.07□□□□□ -1.44
CSNK1D-213ENST00000580446 DPM2O94777 84 aa6.06□□□□□ -1.44
CSNK1D-213ENST00000580446 TMEM218A2RU14 115 aa6.05□□□□□ -1.44
CSNK1D-213ENST00000580446 COX19Q49B96 90 aa6.05□□□□□ -1.44
CSNK1D-213ENST00000580446 LINC00575Q6W349 94 aa6.05□□□□□ -1.44
CSNK1D-213ENST00000580446 SNHG12Q9BXW3 62 aa6.04□□□□□ -1.44
CSNK1D-213ENST00000580446 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
CSNK1D-213ENST00000580446 IGKCP01834 107 aa6.03□□□□□ -1.44
CSNK1D-213ENST00000580446 UQCC3Q6UW78 93 aa6.03□□□□□ -1.44
CSNK1D-213ENST00000580446 TMEM238LA0A1B0GVL6 79 aa6.02□□□□□ -1.45
CSNK1D-213ENST00000580446 hADV29S1A0JD25 119 aa6.02□□□□□ -1.45
CSNK1D-213ENST00000580446 TIMM17BO60830 172 aa6.02□□□□□ -1.45
CSNK1D-213ENST00000580446 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
CSNK1D-213ENST00000580446 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
CSNK1D-213ENST00000580446 E9PLD3 99 aa6.01□□□□□ -1.45
CSNK1D-213ENST00000580446 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
CSNK1D-213ENST00000580446 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
CSNK1D-213ENST00000580446 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
CSNK1D-213ENST00000580446 C5orf47Q569G3 176 aa5.98□□□□□ -1.45
CSNK1D-213ENST00000580446 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
CSNK1D-213ENST00000580446 HSBP1O75506 76 aa5.96□□□□□ -1.46
CSNK1D-213ENST00000580446 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
CSNK1D-213ENST00000580446 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 FABP4P15090 132 aa5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 TMA7Q9Y2S6 64 aaKnown RBP5.94□□□□□ -1.46
CSNK1D-213ENST00000580446 APOC3P02656 99 aa5.93□□□□□ -1.46
CSNK1D-213ENST00000580446 VAMP3Q15836 100 aa5.93□□□□□ -1.46
CSNK1D-213ENST00000580446 SVBPQ8N300 66 aa5.93□□□□□ -1.46
CSNK1D-213ENST00000580446 SNAPINO95295 136 aa5.92□□□□□ -1.46
CSNK1D-213ENST00000580446 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.91□□□□□ -1.46
CSNK1D-213ENST00000580446 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
CSNK1D-213ENST00000580446 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
CSNK1D-213ENST00000580446 MT1XP80297 61 aa5.88□□□□□ -1.47
CSNK1D-213ENST00000580446 LINC00310P59036 64 aa5.87□□□□□ -1.47
CSNK1D-213ENST00000580446 YPEL4Q96NS1 127 aa5.87□□□□□ -1.47
CSNK1D-213ENST00000580446 C3orf79P0CE67 100 aa5.86□□□□□ -1.47
CSNK1D-213ENST00000580446 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
CSNK1D-213ENST00000580446 LOC105371267A0A1B0GV96 52 aa5.85□□□□□ -1.47
CSNK1D-213ENST00000580446 A0A1B0GVX0 72 aa5.85□□□□□ -1.47
CSNK1D-213ENST00000580446 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
CSNK1D-213ENST00000580446 SCGB1D4Q6XE38 83 aa5.85□□□□□ -1.47
CSNK1D-213ENST00000580446 LINC00472Q9H8W2 130 aa5.85□□□□□ -1.47
CSNK1D-213ENST00000580446 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
CSNK1D-213ENST00000580446 KLKP1Q107X0 134 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms