RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 COX6CP09669 75 aa13.15□□□□□ -0.3
NDEL1-207ENST00000580012 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
NDEL1-207ENST00000580012 C9orf153Q5TBE3 101 aa13.12□□□□□ -0.31
NDEL1-207ENST00000580012 CLEC2BQ92478 149 aa13.12□□□□□ -0.31
NDEL1-207ENST00000580012 OCIAD2Q56VL3 154 aa13.11□□□□□ -0.31
NDEL1-207ENST00000580012 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
NDEL1-207ENST00000580012 SPINK1P00995 79 aa13.07□□□□□ -0.32
NDEL1-207ENST00000580012 SCGB1C2P0DMR2 95 aa13.06□□□□□ -0.32
NDEL1-207ENST00000580012 BATFQ16520 125 aa13.06□□□□□ -0.32
NDEL1-207ENST00000580012 IGLV8-61A0A075B6I0 122 aa13.04□□□□□ -0.32
NDEL1-207ENST00000580012 RPS29P62273 56 aaKnown RBP13.03□□□□□ -0.32
NDEL1-207ENST00000580012 LST1O00453 97 aa13.02□□□□□ -0.33
NDEL1-207ENST00000580012 GHRHP01286 108 aa13.02□□□□□ -0.33
NDEL1-207ENST00000580012 TRACP01848 142 aa13.02□□□□□ -0.33
NDEL1-207ENST00000580012 SNHG12Q9BXW3 62 aa13.02□□□□□ -0.33
NDEL1-207ENST00000580012 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
NDEL1-207ENST00000580012 F8WEM9 126 aa12.99□□□□□ -0.33
NDEL1-207ENST00000580012 CD164Q04900 197 aa12.99□□□□□ -0.33
NDEL1-207ENST00000580012 DNAL4O96015 105 aa12.98□□□□□ -0.33
NDEL1-207ENST00000580012 H3BQ85 93 aa12.97□□□□□ -0.33
NDEL1-207ENST00000580012 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
NDEL1-207ENST00000580012 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
NDEL1-207ENST00000580012 NDUFV3P56181 108 aaKnown RBP12.96□□□□□ -0.33
NDEL1-207ENST00000580012 Q6JHZ5 121 aa12.96□□□□□ -0.33
NDEL1-207ENST00000580012 A0A0G2JQZ4 141 aa12.95□□□□□ -0.34
NDEL1-207ENST00000580012 C9orf118A6NHY6 69 aa12.95□□□□□ -0.34
NDEL1-207ENST00000580012 H3BUT2 72 aa12.93□□□□□ -0.34
NDEL1-207ENST00000580012 TCL1BO95988 128 aa12.93□□□□□ -0.34
NDEL1-207ENST00000580012 FABP2P12104 132 aa12.93□□□□□ -0.34
NDEL1-207ENST00000580012 TMEM256-PLSCR3K7ERE1 68 aa12.92□□□□□ -0.34
NDEL1-207ENST00000580012 LRP2P98164 4655 aa12.92□□□□□ -0.34
NDEL1-207ENST00000580012 IGFL1Q6UW32 110 aa12.91□□□□□ -0.34
NDEL1-207ENST00000580012 ATXN8Q156A1 80 aa12.9□□□□□ -0.34
NDEL1-207ENST00000580012 HRCT1Q6UXD1 115 aa12.9□□□□□ -0.34
NDEL1-207ENST00000580012 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
NDEL1-207ENST00000580012 PRR4Q16378 134 aa12.89□□□□□ -0.35
NDEL1-207ENST00000580012 LYRM7Q5U5X0 104 aa12.89□□□□□ -0.35
NDEL1-207ENST00000580012 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
NDEL1-207ENST00000580012 UBE2V1Q13404 147 aa12.88□□□□□ -0.35
NDEL1-207ENST00000580012 Q5XG85 94 aa12.88□□□□□ -0.35
NDEL1-207ENST00000580012 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
NDEL1-207ENST00000580012 H3BMG7 143 aa12.87□□□□□ -0.35
NDEL1-207ENST00000580012 PCP4L1A6NKN8 68 aa12.86□□□□□ -0.35
NDEL1-207ENST00000580012 A0A1W2PPM0 123 aa12.85□□□□□ -0.35
NDEL1-207ENST00000580012 BAALC-AS2P0C853 105 aa12.85□□□□□ -0.35
NDEL1-207ENST00000580012 COL5A1-AS1Q5SY13 56 aa12.85□□□□□ -0.35
NDEL1-207ENST00000580012 LIMD2Q9BT23 127 aa12.84□□□□□ -0.35
NDEL1-207ENST00000580012 FP248Q71RG6 208 aaPredicted RBP12.83□□□□□ -0.36
NDEL1-207ENST00000580012 Q6Q795 121 aa12.8□□□□□ -0.36
NDEL1-207ENST00000580012 IGLV7-46A0A075B6I9 117 aa12.79□□□□□ -0.36
NDEL1-207ENST00000580012 TRBV7-7A0A0K0K1E9 115 aa12.79□□□□□ -0.36
NDEL1-207ENST00000580012 ANKRD29Q8N6D5 301 aa12.77□□□□□ -0.37
NDEL1-207ENST00000580012 LPAP08519 4548 aa12.77□□□□□ -0.37
NDEL1-207ENST00000580012 TEN1Q86WV5 123 aa12.75□□□□□ -0.37
NDEL1-207ENST00000580012 A0A1W2PNM2 257 aa12.73□□□□□ -0.37
NDEL1-207ENST00000580012 ASB16-AS1Q495Z4 193 aa12.73□□□□□ -0.37
NDEL1-207ENST00000580012 C9JAW5 83 aa12.72□□□□□ -0.37
NDEL1-207ENST00000580012 TPRXLQ17RH7 258 aa12.72□□□□□ -0.37
NDEL1-207ENST00000580012 C1orf195Q5TG92 126 aa12.72□□□□□ -0.37
NDEL1-207ENST00000580012 TRBV7-4A0A0J9YYF1 115 aa12.7□□□□□ -0.38
NDEL1-207ENST00000580012 RBM3P98179 157 aaKnown RBP12.7□□□□□ -0.38
NDEL1-207ENST00000580012 A0A1B0GV72 72 aa12.69□□□□□ -0.38
NDEL1-207ENST00000580012 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
NDEL1-207ENST00000580012 KRTAP13-3Q3SY46 172 aa12.66□□□□□ -0.38
NDEL1-207ENST00000580012 JMJD7-PLA2G4BH0Y9G9 81 aa12.65□□□□□ -0.38
NDEL1-207ENST00000580012 OBSCN-AS1Q96MR7 158 aa12.65□□□□□ -0.38
NDEL1-207ENST00000580012 H3BT86 120 aa12.64□□□□□ -0.39
NDEL1-207ENST00000580012 DSCR8Q96T75 97 aa12.63□□□□□ -0.39
NDEL1-207ENST00000580012 A0A087WSZ3 146 aa12.62□□□□□ -0.39
NDEL1-207ENST00000580012 CCKP06307 115 aa12.61□□□□□ -0.39
NDEL1-207ENST00000580012 SS18L2Q9UHA2 77 aa12.61□□□□□ -0.39
NDEL1-207ENST00000580012 K7EP34 96 aa12.6□□□□□ -0.39
NDEL1-207ENST00000580012 LOC110117498A0A087WWA1 95 aa12.58□□□□□ -0.4
NDEL1-207ENST00000580012 MTURNQ8N3F0 131 aa12.58□□□□□ -0.4
NDEL1-207ENST00000580012 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
NDEL1-207ENST00000580012 PDE6GP18545 87 aa12.55□□□□□ -0.4
NDEL1-207ENST00000580012 SMCPP49901 116 aaPredicted RBP12.55□□□□□ -0.4
NDEL1-207ENST00000580012 Q6ZQT0 140 aa12.55□□□□□ -0.4
NDEL1-207ENST00000580012 PRO0461Q9UI25 63 aa12.55□□□□□ -0.4
NDEL1-207ENST00000580012 Q96NJ1 140 aa12.52□□□□□ -0.41
NDEL1-207ENST00000580012 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
NDEL1-207ENST00000580012 A0A1B0GW54 56 aa12.49□□□□□ -0.41
NDEL1-207ENST00000580012 GTF2H5Q6ZYL4 71 aa12.49□□□□□ -0.41
NDEL1-207ENST00000580012 VPS25Q9BRG1 176 aa12.49□□□□□ -0.41
NDEL1-207ENST00000580012 C21orf62-AS1Q17RA5 79 aa12.48□□□□□ -0.41
NDEL1-207ENST00000580012 LINC00472Q9H8W2 130 aa12.47□□□□□ -0.41
NDEL1-207ENST00000580012 XP32Q5T750 250 aa12.44□□□□□ -0.42
NDEL1-207ENST00000580012 C9orf92A6NGG3 77 aa12.42□□□□□ -0.42
NDEL1-207ENST00000580012 MUC17Q685J3 4493 aa12.41□□□□□ -0.42
NDEL1-207ENST00000580012 F8W1H4 67 aa12.39□□□□□ -0.43
NDEL1-207ENST00000580012 IGKV4-1P06312 121 aa12.35□□□□□ -0.43
NDEL1-207ENST00000580012 DEFB116Q30KQ4 102 aa12.33□□□□□ -0.44
NDEL1-207ENST00000580012 MUC2Q02817 5179 aa12.32□□□□□ -0.44
NDEL1-207ENST00000580012 SIGMAR1Q99720 223 aa12.3□□□□□ -0.44
NDEL1-207ENST00000580012 J3KT08 172 aa12.28□□□□□ -0.44
NDEL1-207ENST00000580012 SEC61BP60468 96 aaKnown RBP12.28□□□□□ -0.44
NDEL1-207ENST00000580012 NREPQ16612 68 aa12.25□□□□□ -0.45
NDEL1-207ENST00000580012 ETDBQ3ZM63 59 aa12.25□□□□□ -0.45
NDEL1-207ENST00000580012 RPL37P61927 97 aaKnown RBP12.23□□□□□ -0.45
NDEL1-207ENST00000580012 A0A1B0GV90 55 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms