RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SPRR1BP22528 89 aa2.8□□□□□ -1.96
COPS3-216ENST00000579716 ZDBF2Q9HCK1 2354 aa2.79□□□□□ -1.96
COPS3-216ENST00000579716 NOP10Q9NPE3 64 aaKnown RBP2.79□□□□□ -1.96
COPS3-216ENST00000579716 KLK9Q2XQG4 91 aa2.77□□□□□ -1.97
COPS3-216ENST00000579716 IGF2RP11717 2491 aa2.76□□□□□ -1.97
COPS3-216ENST00000579716 DEFB119Q8N690 84 aa2.75□□□□□ -1.97
COPS3-216ENST00000579716 PCNX1Q96RV3 2341 aa2.73□□□□□ -1.97
COPS3-216ENST00000579716 PTPRZ1P23471 2315 aaPredicted RBP2.73□□□□□ -1.97
COPS3-216ENST00000579716 SPINK1P00995 79 aa2.72□□□□□ -1.97
COPS3-216ENST00000579716 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
COPS3-216ENST00000579716 BAHCC1Q9P281 2608 aa2.7□□□□□ -1.98
COPS3-216ENST00000579716 ZNF462Q96JM2 2506 aa2.68□□□□□ -1.98
COPS3-216ENST00000579716 PKDREJQ9NTG1 2253 aa2.67□□□□□ -1.98
COPS3-216ENST00000579716 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
COPS3-216ENST00000579716 STATHP02808 62 aa2.66□□□□□ -1.98
COPS3-216ENST00000579716 ROS1P08922 2347 aa2.65□□□□□ -1.98
COPS3-216ENST00000579716 APELAP0DMC3 54 aa2.63□□□□□ -1.99
COPS3-216ENST00000579716 H0YGG7 62 aa2.62□□□□□ -1.99
COPS3-216ENST00000579716 A0A0D9SG42 100 aa2.61□□□□□ -1.99
COPS3-216ENST00000579716 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
COPS3-216ENST00000579716 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
COPS3-216ENST00000579716 H3BUX3 64 aa2.58□□□□□ -2
COPS3-216ENST00000579716 COX14Q96I36 57 aa2.58□□□□□ -2
COPS3-216ENST00000579716 KRTAP10-10P60014 251 aa2.57□□□□□ -2
COPS3-216ENST00000579716 WNK1Q9H4A3 2382 aa2.56□□□□□ -2
COPS3-216ENST00000579716 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
COPS3-216ENST00000579716 HIVEP2P31629 2446 aa2.54□□□□□ -2
COPS3-216ENST00000579716 KRTAP12-4P60329 112 aa2.53□□□□□ -2
COPS3-216ENST00000579716 CSPG4Q6UVK1 2322 aa2.53□□□□□ -2
COPS3-216ENST00000579716 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
COPS3-216ENST00000579716 RHPN1-AS1Q9BWJ2 59 aa2.52□□□□□ -2.01
COPS3-216ENST00000579716 C2CD3Q4AC94 2353 aa2.52□□□□□ -2.01
COPS3-216ENST00000579716 AKAP6Q13023 2319 aa2.51□□□□□ -2.01
COPS3-216ENST00000579716 M0QZ58 72 aa2.51□□□□□ -2.01
COPS3-216ENST00000579716 DSPP15924 2871 aaKnown RBP2.5□□□□□ -2.01
COPS3-216ENST00000579716 REV3LO60673 3130 aa2.49□□□□□ -2.01
COPS3-216ENST00000579716 MUC6Q6W4X9 2439 aa2.48□□□□□ -2.01
COPS3-216ENST00000579716 DEFB1P60022 68 aa2.48□□□□□ -2.01
COPS3-216ENST00000579716 A0A0C4DFX4 3053 aa2.47□□□□□ -2.01
COPS3-216ENST00000579716 ABCA2Q9BZC7 2435 aa2.47□□□□□ -2.01
COPS3-216ENST00000579716 J3QKU1 62 aa2.45□□□□□ -2.02
COPS3-216ENST00000579716 HTN1P15515 57 aa2.45□□□□□ -2.02
COPS3-216ENST00000579716 FBN1P35555 2871 aaKnown RBP2.44□□□□□ -2.02
COPS3-216ENST00000579716 SPTBN2O15020 2390 aa2.43□□□□□ -2.02
COPS3-216ENST00000579716 SPTBN1Q01082 2364 aaKnown RBP2.43□□□□□ -2.02
COPS3-216ENST00000579716 F8P00451 2351 aa2.43□□□□□ -2.02
COPS3-216ENST00000579716 SPTA1P02549 2419 aa2.39□□□□□ -2.03
COPS3-216ENST00000579716 CACNA1HO95180 2353 aa2.38□□□□□ -2.03
COPS3-216ENST00000579716 CELSR2Q9HCU4 2923 aa2.38□□□□□ -2.03
COPS3-216ENST00000579716 CACNA1AO00555 2505 aa2.38□□□□□ -2.03
COPS3-216ENST00000579716 PKD1L2Q7Z442 2459 aa2.37□□□□□ -2.03
COPS3-216ENST00000579716 TRANK1O15050 2925 aa2.37□□□□□ -2.03
COPS3-216ENST00000579716 ACACAQ13085 2346 aa2.36□□□□□ -2.03
COPS3-216ENST00000579716 CHD7Q9P2D1 2997 aa2.36□□□□□ -2.03
COPS3-216ENST00000579716 DEFB108BQ8NET1 73 aa2.35□□□□□ -2.03
COPS3-216ENST00000579716 RP1L1Q8IWN7 2480 aaPredicted RBP2.35□□□□□ -2.03
COPS3-216ENST00000579716 MEGF8Q7Z7M0 2845 aa2.33□□□□□ -2.04
COPS3-216ENST00000579716 DEFB110Q30KQ9 67 aa2.33□□□□□ -2.04
COPS3-216ENST00000579716 ABCA12Q86UK0 2595 aa2.33□□□□□ -2.04
COPS3-216ENST00000579716 ASH1LQ9NR48 2969 aaKnown RBP2.32□□□□□ -2.04
COPS3-216ENST00000579716 CEP290O15078 2479 aa2.32□□□□□ -2.04
COPS3-216ENST00000579716 DEFB136Q30KP8 78 aa2.31□□□□□ -2.04
COPS3-216ENST00000579716 GVINP1Q7Z2Y8 2422 aa2.3□□□□□ -2.04
COPS3-216ENST00000579716 TENM2Q9NT68 2774 aa2.29□□□□□ -2.04
COPS3-216ENST00000579716 DEFB135Q30KP9 77 aa2.29□□□□□ -2.04
COPS3-216ENST00000579716 SPINK6Q6UWN8 80 aa2.29□□□□□ -2.04
COPS3-216ENST00000579716 PRRC2CQ9Y520 2896 aaKnown RBP2.28□□□□□ -2.04
COPS3-216ENST00000579716 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
COPS3-216ENST00000579716 SPTBN4Q9H254 2564 aa2.27□□□□□ -2.05
COPS3-216ENST00000579716 TNP1P09430 55 aa2.27□□□□□ -2.05
COPS3-216ENST00000579716 A0A096LNI7 61 aa2.26□□□□□ -2.05
COPS3-216ENST00000579716 MGAQ8IWI9 3026 aa2.25□□□□□ -2.05
COPS3-216ENST00000579716 EP300Q09472 2414 aaPredicted RBP2.25□□□□□ -2.05
COPS3-216ENST00000579716 OTOGQ6ZRI0 2925 aa2.25□□□□□ -2.05
COPS3-216ENST00000579716 KRTAP21-3Q3LHN1 58 aa2.24□□□□□ -2.05
COPS3-216ENST00000579716 DEFB124Q8NES8 71 aa2.24□□□□□ -2.05
COPS3-216ENST00000579716 ZNF292O60281 2723 aa2.23□□□□□ -2.05
COPS3-216ENST00000579716 TTC28Q96AY4 2481 aa2.23□□□□□ -2.05
COPS3-216ENST00000579716 SPART-AS1P0CW21 52 aa2.23□□□□□ -2.05
COPS3-216ENST00000579716 UBR5O95071 2799 aaPredicted RBP2.22□□□□□ -2.05
COPS3-216ENST00000579716 Q9Y3F1 56 aa2.22□□□□□ -2.05
COPS3-216ENST00000579716 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
COPS3-216ENST00000579716 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
COPS3-216ENST00000579716 COL6A5A8TX70 2615 aa2.21□□□□□ -2.06
COPS3-216ENST00000579716 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
COPS3-216ENST00000579716 VWFP04275 2813 aa2.18□□□□□ -2.06
COPS3-216ENST00000579716 M0R2T5 61 aa2.18□□□□□ -2.06
COPS3-216ENST00000579716 HECTD1Q9ULT8 2610 aa2.18□□□□□ -2.06
COPS3-216ENST00000579716 CCDC168Q8NDH2 2452 aa2.17□□□□□ -2.06
COPS3-216ENST00000579716 NCOR1O75376 2440 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 APC2O95996 2303 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 C9orf92A6NGG3 77 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 POLQO75417 2590 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 NAV2Q8IVL1 2488 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 USP24Q9UPU5 2620 aa2.16□□□□□ -2.06
COPS3-216ENST00000579716 AKAP13Q12802 2813 aa2.14□□□□□ -2.07
COPS3-216ENST00000579716 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
COPS3-216ENST00000579716 DMBT1Q9UGM3 2413 aaPredicted RBP2.12□□□□□ -2.07
COPS3-216ENST00000579716 SETD2Q9BYW2 2564 aaPredicted RBP2.1□□□□□ -2.07
COPS3-216ENST00000579716 CEP250Q9BV73 2442 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms