RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 F8WEM9 126 aa12.55□□□□□ -0.4
VAPA-205ENST00000578314 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
VAPA-205ENST00000578314 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.54□□□□□ -0.4
VAPA-205ENST00000578314 PAM16Q9Y3D7 125 aa12.54□□□□□ -0.4
VAPA-205ENST00000578314 CFC1BP0CG36 223 aa12.53□□□□□ -0.4
VAPA-205ENST00000578314 CFC1P0CG37 223 aa12.53□□□□□ -0.4
VAPA-205ENST00000578314 SPATA45Q537H7 98 aa12.53□□□□□ -0.4
VAPA-205ENST00000578314 IGLV8-61A0A075B6I0 122 aa12.52□□□□□ -0.41
VAPA-205ENST00000578314 C9orf92A6NGG3 77 aa12.51□□□□□ -0.41
VAPA-205ENST00000578314 Q6JHZ5 121 aa12.5□□□□□ -0.41
VAPA-205ENST00000578314 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
VAPA-205ENST00000578314 VAMP8Q9BV40 100 aa12.5□□□□□ -0.41
VAPA-205ENST00000578314 TCL1BO95988 128 aa12.49□□□□□ -0.41
VAPA-205ENST00000578314 OCIAD2Q56VL3 154 aa12.49□□□□□ -0.41
VAPA-205ENST00000578314 C2orf91Q6ZV80 131 aa12.49□□□□□ -0.41
VAPA-205ENST00000578314 A0A0B4J2C4 111 aa12.47□□□□□ -0.41
VAPA-205ENST00000578314 RAB37Q96AX2 223 aa12.47□□□□□ -0.41
VAPA-205ENST00000578314 IGFL1Q6UW32 110 aa12.45□□□□□ -0.42
VAPA-205ENST00000578314 CLEC2BQ92478 149 aa12.45□□□□□ -0.42
VAPA-205ENST00000578314 TMA7Q9Y2S6 64 aaKnown RBP12.44□□□□□ -0.42
VAPA-205ENST00000578314 SNHG12Q9BXW3 62 aa12.43□□□□□ -0.42
VAPA-205ENST00000578314 H0YGX0 51 aa12.42□□□□□ -0.42
VAPA-205ENST00000578314 PCOTHQ58A44 107 aa12.42□□□□□ -0.42
VAPA-205ENST00000578314 TRBV7-7A0A0K0K1E9 115 aa12.41□□□□□ -0.42
VAPA-205ENST00000578314 CEND1Q8N111 149 aa12.41□□□□□ -0.42
VAPA-205ENST00000578314 SNCGO76070 127 aa12.39□□□□□ -0.43
VAPA-205ENST00000578314 FAM218AQ96MZ4 157 aa12.37□□□□□ -0.43
VAPA-205ENST00000578314 TMEM238LA0A1B0GVL6 79 aa12.36□□□□□ -0.43
VAPA-205ENST00000578314 A6NJY4 79 aa12.36□□□□□ -0.43
VAPA-205ENST00000578314 PRO1854Q9UHT4 67 aa12.36□□□□□ -0.43
VAPA-205ENST00000578314 H3BUT2 72 aa12.34□□□□□ -0.43
VAPA-205ENST00000578314 FXYD2P54710 66 aa12.33□□□□□ -0.44
VAPA-205ENST00000578314 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
VAPA-205ENST00000578314 A0A1B0GX51 115 aa12.32□□□□□ -0.44
VAPA-205ENST00000578314 RPL37P61927 97 aaKnown RBP12.32□□□□□ -0.44
VAPA-205ENST00000578314 LCE2CQ5TA81 110 aa12.3□□□□□ -0.44
VAPA-205ENST00000578314 KRTAP9-6A0A140TA67 174 aa12.29□□□□□ -0.44
VAPA-205ENST00000578314 NDUFV3P56181 108 aaKnown RBP12.29□□□□□ -0.44
VAPA-205ENST00000578314 Q6Q795 121 aa12.29□□□□□ -0.44
VAPA-205ENST00000578314 KRTAP19-2Q3LHN2 52 aa12.28□□□□□ -0.44
VAPA-205ENST00000578314 GHRHP01286 108 aa12.27□□□□□ -0.45
VAPA-205ENST00000578314 LST1O00453 97 aa12.25□□□□□ -0.45
VAPA-205ENST00000578314 TRIAP1O43715 76 aa12.25□□□□□ -0.45
VAPA-205ENST00000578314 HSD52Q0P140 79 aa12.25□□□□□ -0.45
VAPA-205ENST00000578314 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
VAPA-205ENST00000578314 H3BMG7 143 aa12.21□□□□□ -0.45
VAPA-205ENST00000578314 FABP2P12104 132 aa12.21□□□□□ -0.45
VAPA-205ENST00000578314 SS18L2Q9UHA2 77 aa12.21□□□□□ -0.45
VAPA-205ENST00000578314 OBSCN-AS1Q96MR7 158 aa12.17□□□□□ -0.46
VAPA-205ENST00000578314 K7ERJ3 54 aa12.16□□□□□ -0.46
VAPA-205ENST00000578314 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
VAPA-205ENST00000578314 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
VAPA-205ENST00000578314 A0A087WSZ3 146 aa12.14□□□□□ -0.47
VAPA-205ENST00000578314 PSMB2P49721 201 aa12.14□□□□□ -0.47
VAPA-205ENST00000578314 H3BQ85 93 aa12.13□□□□□ -0.47
VAPA-205ENST00000578314 Q75L30 129 aa12.13□□□□□ -0.47
VAPA-205ENST00000578314 DNAL4O96015 105 aa12.12□□□□□ -0.47
VAPA-205ENST00000578314 COX6CP09669 75 aa12.12□□□□□ -0.47
VAPA-205ENST00000578314 MT1HP80294 61 aa12.12□□□□□ -0.47
VAPA-205ENST00000578314 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
VAPA-205ENST00000578314 A0A1W2PNM2 257 aa12.11□□□□□ -0.47
VAPA-205ENST00000578314 Q96NJ1 140 aa12.09□□□□□ -0.47
VAPA-205ENST00000578314 TMEM256-PLSCR3K7ERE1 68 aa12.07□□□□□ -0.48
VAPA-205ENST00000578314 ATP11AUNQ6ZP68 121 aa12.07□□□□□ -0.48
VAPA-205ENST00000578314 ANKRD29Q8N6D5 301 aa12.06□□□□□ -0.48
VAPA-205ENST00000578314 TRBV7-4A0A0J9YYF1 115 aa12.03□□□□□ -0.48
VAPA-205ENST00000578314 FSIP2Q5CZC0 6907 aa12.02□□□□□ -0.49
VAPA-205ENST00000578314 C20orf166-AS1Q96NR2 134 aa12.01□□□□□ -0.49
VAPA-205ENST00000578314 TRACP01848 142 aa12□□□□□ -0.49
VAPA-205ENST00000578314 UBE2V1Q13404 147 aa12□□□□□ -0.49
VAPA-205ENST00000578314 SMIM6P0DI80 62 aa11.99□□□□□ -0.49
VAPA-205ENST00000578314 A0A1B0GV72 72 aa11.98□□□□□ -0.49
VAPA-205ENST00000578314 A8MUU9 505 aa11.98□□□□□ -0.49
VAPA-205ENST00000578314 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
VAPA-205ENST00000578314 COX6B2Q6YFQ2 88 aa11.96□□□□□ -0.49
VAPA-205ENST00000578314 CCKP06307 115 aa11.94□□□□□ -0.5
VAPA-205ENST00000578314 DSCR10P59022 87 aa11.93□□□□□ -0.5
VAPA-205ENST00000578314 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
VAPA-205ENST00000578314 CRCT1Q9UGL9 99 aa11.92□□□□□ -0.5
VAPA-205ENST00000578314 FLGP20930 4061 aaPredicted RBP11.91□□□□□ -0.5
VAPA-205ENST00000578314 IGKV4-1P06312 121 aa11.91□□□□□ -0.5
VAPA-205ENST00000578314 LINC00472Q9H8W2 130 aa11.91□□□□□ -0.5
VAPA-205ENST00000578314 LORP23490 312 aaPredicted RBP11.9□□□□□ -0.5
VAPA-205ENST00000578314 LINC00313P59037 77 aa11.89□□□□□ -0.51
VAPA-205ENST00000578314 KRTAP10-6P60371 365 aaPredicted RBP11.89□□□□□ -0.51
VAPA-205ENST00000578314 M0R143 59 aa11.88□□□□□ -0.51
VAPA-205ENST00000578314 RBM3P98179 157 aaKnown RBP11.88□□□□□ -0.51
VAPA-205ENST00000578314 M0R2T5 61 aa11.86□□□□□ -0.51
VAPA-205ENST00000578314 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
VAPA-205ENST00000578314 KRTAP16-1A8MUX0 517 aa11.84□□□□□ -0.51
VAPA-205ENST00000578314 DEFB116Q30KQ4 102 aa11.84□□□□□ -0.51
VAPA-205ENST00000578314 TSTD3H0UI37 97 aa11.83□□□□□ -0.52
VAPA-205ENST00000578314 DSCR8Q96T75 97 aa11.83□□□□□ -0.52
VAPA-205ENST00000578314 NOTCH2NLQ7Z3S9 236 aa11.81□□□□□ -0.52
VAPA-205ENST00000578314 VPS25Q9BRG1 176 aa11.8□□□□□ -0.52
VAPA-205ENST00000578314 LOC105371267A0A1B0GV96 52 aa11.79□□□□□ -0.52
VAPA-205ENST00000578314 C9JAW5 83 aa11.77□□□□□ -0.53
VAPA-205ENST00000578314 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
VAPA-205ENST00000578314 IGHV6-1A0A0B4J1U7 121 aa11.76□□□□□ -0.53
VAPA-205ENST00000578314 C21orf62-AS1Q17RA5 79 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms