RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 VAMP3Q15836 100 aa13.12□□□□□ -0.31
THRA-208ENST00000578218 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
THRA-208ENST00000578218 Q6JHZ5 121 aa13.1□□□□□ -0.31
THRA-208ENST00000578218 Q6ZQY7 126 aa13.1□□□□□ -0.31
THRA-208ENST00000578218 CLEC2BQ92478 149 aa13.1□□□□□ -0.31
THRA-208ENST00000578218 TRBV7-7A0A0K0K1E9 115 aa13.08□□□□□ -0.32
THRA-208ENST00000578218 Q6Q795 121 aa13.08□□□□□ -0.32
THRA-208ENST00000578218 LINC00575Q6W349 94 aa13.08□□□□□ -0.32
THRA-208ENST00000578218 IGFL1Q6UW32 110 aa13.06□□□□□ -0.32
THRA-208ENST00000578218 OBSCN-AS1Q96MR7 158 aa13.06□□□□□ -0.32
THRA-208ENST00000578218 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
THRA-208ENST00000578218 ATP11AUNQ6ZP68 121 aa13.05□□□□□ -0.32
THRA-208ENST00000578218 Q75L30 129 aa13.02□□□□□ -0.33
THRA-208ENST00000578218 SNRPEP62304 92 aaKnown RBP13□□□□□ -0.33
THRA-208ENST00000578218 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
THRA-208ENST00000578218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
THRA-208ENST00000578218 LST1O00453 97 aa12.94□□□□□ -0.34
THRA-208ENST00000578218 PPDPFLQ8WWR9 84 aa12.92□□□□□ -0.34
THRA-208ENST00000578218 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
THRA-208ENST00000578218 Q96NJ1 140 aa12.91□□□□□ -0.34
THRA-208ENST00000578218 SNHG12Q9BXW3 62 aa12.91□□□□□ -0.34
THRA-208ENST00000578218 H3BUT2 72 aa12.9□□□□□ -0.34
THRA-208ENST00000578218 BVES-AS1Q5T3Y7 98 aa12.9□□□□□ -0.34
THRA-208ENST00000578218 C12orf57Q99622 126 aa12.9□□□□□ -0.34
THRA-208ENST00000578218 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
THRA-208ENST00000578218 SS18L2Q9UHA2 77 aa12.87□□□□□ -0.35
THRA-208ENST00000578218 CFC1P0CG37 223 aa12.81□□□□□ -0.36
THRA-208ENST00000578218 S100A2P29034 98 aa12.81□□□□□ -0.36
THRA-208ENST00000578218 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
THRA-208ENST00000578218 C20orf166-AS1Q96NR2 134 aa12.8□□□□□ -0.36
THRA-208ENST00000578218 TRBV20-1A0A075B6N2 111 aa12.79□□□□□ -0.36
THRA-208ENST00000578218 HIST3H2BBQ8N257 126 aa12.78□□□□□ -0.36
THRA-208ENST00000578218 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
THRA-208ENST00000578218 A8MUU9 505 aa12.76□□□□□ -0.37
THRA-208ENST00000578218 SNCGO76070 127 aa12.74□□□□□ -0.37
THRA-208ENST00000578218 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
THRA-208ENST00000578218 A0A087WSZ3 146 aa12.73□□□□□ -0.37
THRA-208ENST00000578218 KRTAP9-8Q9BYQ0 159 aa12.71□□□□□ -0.37
THRA-208ENST00000578218 NDUFV3P56181 108 aaKnown RBP12.69□□□□□ -0.38
THRA-208ENST00000578218 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
THRA-208ENST00000578218 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.68□□□□□ -0.38
THRA-208ENST00000578218 DSCR10P59022 87 aa12.68□□□□□ -0.38
THRA-208ENST00000578218 SIGMAR1Q99720 223 aa12.68□□□□□ -0.38
THRA-208ENST00000578218 KRTAP9-7A8MTY7 169 aa12.65□□□□□ -0.38
THRA-208ENST00000578218 COX8AP10176 69 aa12.65□□□□□ -0.38
THRA-208ENST00000578218 FAM236DA0A1B0GTK5 79 aa12.64□□□□□ -0.39
THRA-208ENST00000578218 H0YGX0 51 aa12.64□□□□□ -0.39
THRA-208ENST00000578218 FAM236CP0DP71 79 aa12.64□□□□□ -0.39
THRA-208ENST00000578218 FAM218AQ96MZ4 157 aa12.64□□□□□ -0.39
THRA-208ENST00000578218 USH2AO75445 5202 aa12.63□□□□□ -0.39
THRA-208ENST00000578218 H3BMG7 143 aa12.62□□□□□ -0.39
THRA-208ENST00000578218 S100A6P06703 90 aa12.61□□□□□ -0.39
THRA-208ENST00000578218 A0A0B4J2C4 111 aa12.59□□□□□ -0.39
THRA-208ENST00000578218 GHRHP01286 108 aa12.59□□□□□ -0.39
THRA-208ENST00000578218 FABP2P12104 132 aa12.59□□□□□ -0.39
THRA-208ENST00000578218 SSPOA2VEC9 5147 aa12.58□□□□□ -0.4
THRA-208ENST00000578218 DLEU1O43261 78 aa12.57□□□□□ -0.4
THRA-208ENST00000578218 LINC00313P59037 77 aa12.54□□□□□ -0.4
THRA-208ENST00000578218 A0A1B0GX51 115 aa12.53□□□□□ -0.4
THRA-208ENST00000578218 A0A1W2PNM2 257 aa12.53□□□□□ -0.4
THRA-208ENST00000578218 MT2AP02795 61 aa12.53□□□□□ -0.4
THRA-208ENST00000578218 IGKV4-1P06312 121 aa12.52□□□□□ -0.41
THRA-208ENST00000578218 C14orf144Q96I85 54 aa12.51□□□□□ -0.41
THRA-208ENST00000578218 RBM12B-AS1Q9P1G2 102 aa12.51□□□□□ -0.41
THRA-208ENST00000578218 HIGD1BQ9P298 99 aa12.5□□□□□ -0.41
THRA-208ENST00000578218 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
THRA-208ENST00000578218 A0A1B0GV72 72 aa12.47□□□□□ -0.41
THRA-208ENST00000578218 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.41
THRA-208ENST00000578218 TMEM238LA0A1B0GVL6 79 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 A6NJY4 79 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 MT1FP04733 61 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 ANKRD29Q8N6D5 301 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 PRO1854Q9UHT4 67 aa12.44□□□□□ -0.42
THRA-208ENST00000578218 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
THRA-208ENST00000578218 HRES1P13985 223 aa12.43□□□□□ -0.42
THRA-208ENST00000578218 DNAL4O96015 105 aa12.42□□□□□ -0.42
THRA-208ENST00000578218 C2orf91Q6ZV80 131 aa12.42□□□□□ -0.42
THRA-208ENST00000578218 CEND1Q8N111 149 aa12.42□□□□□ -0.42
THRA-208ENST00000578218 TRIAP1O43715 76 aa12.41□□□□□ -0.42
THRA-208ENST00000578218 MPLKIPQ8TAP9 179 aa12.41□□□□□ -0.42
THRA-208ENST00000578218 NOTCH2NLQ7Z3S9 236 aa12.4□□□□□ -0.42
THRA-208ENST00000578218 KRTAP10-10P60014 251 aa12.39□□□□□ -0.43
THRA-208ENST00000578218 DEFB116Q30KQ4 102 aa12.39□□□□□ -0.43
THRA-208ENST00000578218 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
THRA-208ENST00000578218 IGHV6-1A0A0B4J1U7 121 aa12.38□□□□□ -0.43
THRA-208ENST00000578218 VAMP8Q9BV40 100 aa12.38□□□□□ -0.43
THRA-208ENST00000578218 FCGBPQ9Y6R7 5405 aaPredicted RBP12.37□□□□□ -0.43
THRA-208ENST00000578218 LCE2BO14633 110 aa12.37□□□□□ -0.43
THRA-208ENST00000578218 KRTAP19-1Q8IUB9 90 aa12.37□□□□□ -0.43
THRA-208ENST00000578218 TRACP01848 142 aa12.36□□□□□ -0.43
THRA-208ENST00000578218 S100A1P23297 94 aa12.36□□□□□ -0.43
THRA-208ENST00000578218 FXYD2P54710 66 aa12.35□□□□□ -0.43
THRA-208ENST00000578218 H3BQ85 93 aa12.33□□□□□ -0.44
THRA-208ENST00000578218 CCKP06307 115 aa12.33□□□□□ -0.44
THRA-208ENST00000578218 LINC00472Q9H8W2 130 aa12.33□□□□□ -0.44
THRA-208ENST00000578218 KRTAP9-3Q9BYQ3 159 aa12.32□□□□□ -0.44
THRA-208ENST00000578218 PSMB2P49721 201 aa12.3□□□□□ -0.44
THRA-208ENST00000578218 MTURNQ8N3F0 131 aa12.3□□□□□ -0.44
THRA-208ENST00000578218 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms