RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PSMB2P49721 201 aa6.53□□□□□ -1.36
SMARCE1-214ENST00000578112 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
SMARCE1-214ENST00000578112 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
SMARCE1-214ENST00000578112 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
SMARCE1-214ENST00000578112 NDUFS5O43920 106 aa6.52□□□□□ -1.37
SMARCE1-214ENST00000578112 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
SMARCE1-214ENST00000578112 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-214ENST00000578112 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 COX17Q14061 63 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 SLC25A20O43772 301 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
SMARCE1-214ENST00000578112 M0R378 163 aa6.5□□□□□ -1.37
SMARCE1-214ENST00000578112 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-214ENST00000578112 RPL37AP8A6NKH3 93 aa6.49□□□□□ -1.37
SMARCE1-214ENST00000578112 TIMM17BO60830 172 aa6.48□□□□□ -1.37
SMARCE1-214ENST00000578112 URB1-AS1Q96HZ7 61 aa6.47□□□□□ -1.37
SMARCE1-214ENST00000578112 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
SMARCE1-214ENST00000578112 GHRHP01286 108 aa6.46□□□□□ -1.37
SMARCE1-214ENST00000578112 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
SMARCE1-214ENST00000578112 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
SMARCE1-214ENST00000578112 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
SMARCE1-214ENST00000578112 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-214ENST00000578112 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
SMARCE1-214ENST00000578112 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
SMARCE1-214ENST00000578112 PRYO14603 147 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 CCKP06307 115 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 A8MUN3 132 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 RETNLBQ9BQ08 111 aa6.43□□□□□ -1.38
SMARCE1-214ENST00000578112 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 HBDP02042 147 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 PRLHP81277 87 aa6.42□□□□□ -1.38
SMARCE1-214ENST00000578112 LST1O00453 97 aa6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 SPINK1P00995 79 aa6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 LCA10Q71F78 164 aa6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
SMARCE1-214ENST00000578112 Q6ZVQ6 151 aa6.4□□□□□ -1.38
SMARCE1-214ENST00000578112 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
SMARCE1-214ENST00000578112 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.38
SMARCE1-214ENST00000578112 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.39
SMARCE1-214ENST00000578112 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.39
SMARCE1-214ENST00000578112 ZNF22P17026 224 aaPredicted RBP6.39□□□□□ -1.39
SMARCE1-214ENST00000578112 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
SMARCE1-214ENST00000578112 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
SMARCE1-214ENST00000578112 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
SMARCE1-214ENST00000578112 SPRR1AP35321 89 aa6.37□□□□□ -1.39
SMARCE1-214ENST00000578112 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-214ENST00000578112 H7BZZ5 65 aa6.37□□□□□ -1.39
SMARCE1-214ENST00000578112 RBM3P98179 157 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-214ENST00000578112 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
SMARCE1-214ENST00000578112 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
SMARCE1-214ENST00000578112 HIGD2AQ9BW72 106 aa6.36□□□□□ -1.39
SMARCE1-214ENST00000578112 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
SMARCE1-214ENST00000578112 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
SMARCE1-214ENST00000578112 NDUFC1O43677 76 aa6.34□□□□□ -1.39
SMARCE1-214ENST00000578112 MP68P56378 58 aa6.34□□□□□ -1.39
SMARCE1-214ENST00000578112 Q8NBF4 154 aa6.34□□□□□ -1.39
SMARCE1-214ENST00000578112 DAND5Q8N907 189 aa6.33□□□□□ -1.4
SMARCE1-214ENST00000578112 MUC2Q02817 5179 aa6.33□□□□□ -1.4
SMARCE1-214ENST00000578112 LINC00158P58513 81 aa6.32□□□□□ -1.4
SMARCE1-214ENST00000578112 LINC00313P59037 77 aa6.32□□□□□ -1.4
SMARCE1-214ENST00000578112 Q75L30 129 aa6.32□□□□□ -1.4
SMARCE1-214ENST00000578112 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-214ENST00000578112 XP32Q5T750 250 aa6.32□□□□□ -1.4
SMARCE1-214ENST00000578112 A0A096LNJ9 63 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 Q8NDZ9 215 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 SMCR5Q8TEV8 140 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
SMARCE1-214ENST00000578112 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
SMARCE1-214ENST00000578112 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
SMARCE1-214ENST00000578112 Q8N377 158 aa6.3□□□□□ -1.4
SMARCE1-214ENST00000578112 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
SMARCE1-214ENST00000578112 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
SMARCE1-214ENST00000578112 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
SMARCE1-214ENST00000578112 Q1T7F1 81 aa6.29□□□□□ -1.4
SMARCE1-214ENST00000578112 CFC1BP0CG36 223 aa6.27□□□□□ -1.41
SMARCE1-214ENST00000578112 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
SMARCE1-214ENST00000578112 EIF4EBP3O60516 100 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-214ENST00000578112 CXCL6P80162 114 aa6.26□□□□□ -1.41
SMARCE1-214ENST00000578112 C20orf197Q8N268 126 aa6.26□□□□□ -1.41
SMARCE1-214ENST00000578112 Q6JHZ5 121 aa6.26□□□□□ -1.41
SMARCE1-214ENST00000578112 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
SMARCE1-214ENST00000578112 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
SMARCE1-214ENST00000578112 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
SMARCE1-214ENST00000578112 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
SMARCE1-214ENST00000578112 TRBV10-3A0A0K0K1G6 114 aa6.24□□□□□ -1.41
SMARCE1-214ENST00000578112 MOBPQ13875 183 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms