RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 SMR3BP02814 79 aaPredicted RBP6.5□□□□□ -1.37
SEC22B-201ENST00000578049 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
SEC22B-201ENST00000578049 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
SEC22B-201ENST00000578049 Q6ZSA8 131 aa6.49□□□□□ -1.37
SEC22B-201ENST00000578049 H3BS24 57 aa6.49□□□□□ -1.37
SEC22B-201ENST00000578049 NBEAL1Q6ZS30 2694 aa6.49□□□□□ -1.37
SEC22B-201ENST00000578049 CENPEQ02224 2701 aa6.48□□□□□ -1.37
SEC22B-201ENST00000578049 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
SEC22B-201ENST00000578049 LCE6AA0A183 80 aa6.47□□□□□ -1.37
SEC22B-201ENST00000578049 A0A0A0MQY5 61 aa6.46□□□□□ -1.37
SEC22B-201ENST00000578049 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
SEC22B-201ENST00000578049 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
SEC22B-201ENST00000578049 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.38
SEC22B-201ENST00000578049 CFAP46Q8IYW2 2715 aa6.45□□□□□ -1.38
SEC22B-201ENST00000578049 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
SEC22B-201ENST00000578049 NOTCH1P46531 2555 aa6.43□□□□□ -1.38
SEC22B-201ENST00000578049 ROMO1P60602 79 aa6.42□□□□□ -1.38
SEC22B-201ENST00000578049 S4R3F8 94 aa6.42□□□□□ -1.38
SEC22B-201ENST00000578049 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
SEC22B-201ENST00000578049 GCN1Q92616 2671 aaKnown RBP6.4□□□□□ -1.38
SEC22B-201ENST00000578049 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
SEC22B-201ENST00000578049 A0A087X002 238 aa6.37□□□□□ -1.39
SEC22B-201ENST00000578049 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
SEC22B-201ENST00000578049 DMBT1Q9UGM3 2413 aaPredicted RBP6.36□□□□□ -1.39
SEC22B-201ENST00000578049 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
SEC22B-201ENST00000578049 A6NN06 94 aa6.35□□□□□ -1.39
SEC22B-201ENST00000578049 R4GN34 69 aa6.33□□□□□ -1.4
SEC22B-201ENST00000578049 TEX15Q9BXT5 2789 aa6.3□□□□□ -1.4
SEC22B-201ENST00000578049 ZNF292O60281 2723 aa6.3□□□□□ -1.4
SEC22B-201ENST00000578049 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
SEC22B-201ENST00000578049 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
SEC22B-201ENST00000578049 SEC61BP60468 96 aaKnown RBP6.27□□□□□ -1.4
SEC22B-201ENST00000578049 DNAH12Q6ZR08 3092 aa6.25□□□□□ -1.41
SEC22B-201ENST00000578049 CHD7Q9P2D1 2997 aa6.24□□□□□ -1.41
SEC22B-201ENST00000578049 PANO1I0J062 215 aa6.24□□□□□ -1.41
SEC22B-201ENST00000578049 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
SEC22B-201ENST00000578049 STAB2Q8WWQ8 2551 aa6.22□□□□□ -1.41
SEC22B-201ENST00000578049 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
SEC22B-201ENST00000578049 NSD1Q96L73 2696 aaPredicted RBP6.2□□□□□ -1.42
SEC22B-201ENST00000578049 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
SEC22B-201ENST00000578049 SETXQ7Z333 2677 aaKnown RBP6.19□□□□□ -1.42
SEC22B-201ENST00000578049 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
SEC22B-201ENST00000578049 M0QZ58 72 aa6.18□□□□□ -1.42
SEC22B-201ENST00000578049 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
SEC22B-201ENST00000578049 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
SEC22B-201ENST00000578049 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
SEC22B-201ENST00000578049 UBR5O95071 2799 aaPredicted RBP6.16□□□□□ -1.42
SEC22B-201ENST00000578049 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.43
SEC22B-201ENST00000578049 MAP1AP78559 2803 aaPredicted RBP6.15□□□□□ -1.43
SEC22B-201ENST00000578049 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
SEC22B-201ENST00000578049 KRTAP10-2P60368 255 aa6.14□□□□□ -1.43
SEC22B-201ENST00000578049 TRANK1O15050 2925 aa6.13□□□□□ -1.43
SEC22B-201ENST00000578049 Q6ZRN7 208 aaPredicted RBP6.12□□□□□ -1.43
SEC22B-201ENST00000578049 M0R2T5 61 aa6.12□□□□□ -1.43
SEC22B-201ENST00000578049 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
SEC22B-201ENST00000578049 GOLGB1Q14789 3259 aaKnown RBP6.09□□□□□ -1.43
SEC22B-201ENST00000578049 MGAQ8IWI9 3026 aa6.09□□□□□ -1.43
SEC22B-201ENST00000578049 Q5VSD8 79 aa6.09□□□□□ -1.44
SEC22B-201ENST00000578049 KRTAP11-1Q8IUC1 163 aa6.09□□□□□ -1.44
SEC22B-201ENST00000578049 IGSF10Q6WRI0 2623 aa6.05□□□□□ -1.44
SEC22B-201ENST00000578049 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
SEC22B-201ENST00000578049 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
SEC22B-201ENST00000578049 A0A0C4DFX4 3053 aa6.03□□□□□ -1.44
SEC22B-201ENST00000578049 CFAP54Q96N23 3096 aa6.02□□□□□ -1.45
SEC22B-201ENST00000578049 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
SEC22B-201ENST00000578049 A8MU10 97 aa6□□□□□ -1.45
SEC22B-201ENST00000578049 PLAC4Q8WY50 150 aa6□□□□□ -1.45
SEC22B-201ENST00000578049 KMT2BQ9UMN6 2715 aaPredicted RBP5.99□□□□□ -1.45
SEC22B-201ENST00000578049 A8MUU9 505 aa5.98□□□□□ -1.45
SEC22B-201ENST00000578049 ITPR2Q14571 2701 aa5.97□□□□□ -1.45
SEC22B-201ENST00000578049 ITPR1Q14643 2758 aa5.97□□□□□ -1.45
SEC22B-201ENST00000578049 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
SEC22B-201ENST00000578049 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
SEC22B-201ENST00000578049 DSPP15924 2871 aaKnown RBP5.94□□□□□ -1.46
SEC22B-201ENST00000578049 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
SEC22B-201ENST00000578049 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
SEC22B-201ENST00000578049 HTTP42858 3142 aa5.89□□□□□ -1.47
SEC22B-201ENST00000578049 FLNCQ14315 2725 aa5.89□□□□□ -1.47
SEC22B-201ENST00000578049 APCP25054 2843 aa5.87□□□□□ -1.47
SEC22B-201ENST00000578049 FRYQ5TBA9 3013 aa5.86□□□□□ -1.47
SEC22B-201ENST00000578049 RANBP2P49792 3224 aaKnown RBP5.85□□□□□ -1.47
SEC22B-201ENST00000578049 HIVEP1P15822 2718 aa5.84□□□□□ -1.47
SEC22B-201ENST00000578049 TNP1P09430 55 aa5.84□□□□□ -1.47
SEC22B-201ENST00000578049 PCNTO95613 3336 aa5.84□□□□□ -1.48
SEC22B-201ENST00000578049 WDFY4Q6ZS81 3184 aa5.81□□□□□ -1.48
SEC22B-201ENST00000578049 UTP20O75691 2785 aaKnown RBP5.81□□□□□ -1.48
SEC22B-201ENST00000578049 H0YAA0 97 aa5.75□□□□□ -1.49
SEC22B-201ENST00000578049 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
SEC22B-201ENST00000578049 LAMA2P24043 3122 aaKnown RBP5.73□□□□□ -1.49
SEC22B-201ENST00000578049 P0C880 135 aa5.73□□□□□ -1.49
SEC22B-201ENST00000578049 KALRNO60229 2985 aa5.73□□□□□ -1.49
SEC22B-201ENST00000578049 TACC2O95359 2948 aa5.69□□□□□ -1.5
SEC22B-201ENST00000578049 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
SEC22B-201ENST00000578049 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
SEC22B-201ENST00000578049 TENM4Q6N022 2769 aa5.67□□□□□ -1.5
SEC22B-201ENST00000578049 NBEAQ8NFP9 2946 aa5.67□□□□□ -1.5
SEC22B-201ENST00000578049 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
SEC22B-201ENST00000578049 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
SEC22B-201ENST00000578049 TRIOO75962 3097 aa5.66□□□□□ -1.5
SEC22B-201ENST00000578049 UTRNP46939 3433 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms