RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SPRR1AP35321 89 aa8.8□□□□□ -1
SREBF1-217ENST00000577897 UBE2BP63146 152 aa8.8□□□□□ -1
SREBF1-217ENST00000577897 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
SREBF1-217ENST00000577897 Q6ZRX8 168 aa8.8□□□□□ -1
SREBF1-217ENST00000577897 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
SREBF1-217ENST00000577897 DSCR8Q96T75 97 aa8.79□□□□□ -1
SREBF1-217ENST00000577897 B5MCH6 92 aa8.78□□□□□ -1
SREBF1-217ENST00000577897 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
SREBF1-217ENST00000577897 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
SREBF1-217ENST00000577897 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
SREBF1-217ENST00000577897 C14orf132Q9NPU4 83 aa8.77□□□□□ -1.01
SREBF1-217ENST00000577897 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
SREBF1-217ENST00000577897 CCKP06307 115 aa8.75□□□□□ -1.01
SREBF1-217ENST00000577897 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
SREBF1-217ENST00000577897 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
SREBF1-217ENST00000577897 NDUFV3P56181 108 aaKnown RBP8.74□□□□□ -1.01
SREBF1-217ENST00000577897 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
SREBF1-217ENST00000577897 SCGB1A1P11684 91 aa8.73□□□□□ -1.01
SREBF1-217ENST00000577897 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
SREBF1-217ENST00000577897 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
SREBF1-217ENST00000577897 H0Y9J4 135 aa8.72□□□□□ -1.01
SREBF1-217ENST00000577897 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
SREBF1-217ENST00000577897 CHTF8P0CG12 524 aa8.71□□□□□ -1.02
SREBF1-217ENST00000577897 LINC00643Q86TS7 51 aa8.71□□□□□ -1.02
SREBF1-217ENST00000577897 UBE2AP49459 152 aa8.69□□□□□ -1.02
SREBF1-217ENST00000577897 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
SREBF1-217ENST00000577897 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
SREBF1-217ENST00000577897 F8WEM9 126 aa8.68□□□□□ -1.02
SREBF1-217ENST00000577897 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
SREBF1-217ENST00000577897 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
SREBF1-217ENST00000577897 A0A1B0GV72 72 aa8.67□□□□□ -1.02
SREBF1-217ENST00000577897 Q9BRP9 147 aa8.67□□□□□ -1.02
SREBF1-217ENST00000577897 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
SREBF1-217ENST00000577897 A0A1B0GW54 56 aa8.66□□□□□ -1.02
SREBF1-217ENST00000577897 BCE1O60756 84 aa8.66□□□□□ -1.02
SREBF1-217ENST00000577897 Q6ZQT0 140 aa8.66□□□□□ -1.02
SREBF1-217ENST00000577897 Q6Q795 121 aa8.65□□□□□ -1.02
SREBF1-217ENST00000577897 IMUPQ9GZP8 106 aa8.65□□□□□ -1.02
SREBF1-217ENST00000577897 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 Q8N377 158 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
SREBF1-217ENST00000577897 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
SREBF1-217ENST00000577897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
SREBF1-217ENST00000577897 PRLHP81277 87 aa8.62□□□□□ -1.03
SREBF1-217ENST00000577897 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
SREBF1-217ENST00000577897 Q6JHZ5 121 aa8.6□□□□□ -1.03
SREBF1-217ENST00000577897 TRBV7-7A0A0K0K1E9 115 aa8.59□□□□□ -1.03
SREBF1-217ENST00000577897 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
SREBF1-217ENST00000577897 LINC00846Q9NV44 126 aa8.59□□□□□ -1.03
SREBF1-217ENST00000577897 PCP4P48539 62 aa8.58□□□□□ -1.04
SREBF1-217ENST00000577897 ST20-AS1Q8NBB2 130 aa8.58□□□□□ -1.04
SREBF1-217ENST00000577897 PANO1I0J062 215 aa8.57□□□□□ -1.04
SREBF1-217ENST00000577897 ERC2-IT1O76042 136 aa8.57□□□□□ -1.04
SREBF1-217ENST00000577897 SPRR1BP22528 89 aa8.56□□□□□ -1.04
SREBF1-217ENST00000577897 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
SREBF1-217ENST00000577897 MUC2Q02817 5179 aa8.55□□□□□ -1.04
SREBF1-217ENST00000577897 LPAP08519 4548 aa8.53□□□□□ -1.04
SREBF1-217ENST00000577897 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
SREBF1-217ENST00000577897 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 ZNF861PO60384 105 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 NREPQ16612 68 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
SREBF1-217ENST00000577897 CXCL6P80162 114 aa8.5□□□□□ -1.05
SREBF1-217ENST00000577897 Q6ZVQ6 151 aa8.5□□□□□ -1.05
SREBF1-217ENST00000577897 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
SREBF1-217ENST00000577897 Q8NBF4 154 aa8.5□□□□□ -1.05
SREBF1-217ENST00000577897 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
SREBF1-217ENST00000577897 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
SREBF1-217ENST00000577897 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
SREBF1-217ENST00000577897 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
SREBF1-217ENST00000577897 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
SREBF1-217ENST00000577897 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
SREBF1-217ENST00000577897 CRYGAP11844 174 aa8.45□□□□□ -1.06
SREBF1-217ENST00000577897 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
SREBF1-217ENST00000577897 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
SREBF1-217ENST00000577897 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SREBF1-217ENST00000577897 BPY2O14599 106 aa8.43□□□□□ -1.06
SREBF1-217ENST00000577897 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
SREBF1-217ENST00000577897 IGFL1Q6UW32 110 aa8.43□□□□□ -1.06
SREBF1-217ENST00000577897 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
SREBF1-217ENST00000577897 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
SREBF1-217ENST00000577897 ATOX1O00244 68 aa8.41□□□□□ -1.06
SREBF1-217ENST00000577897 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
SREBF1-217ENST00000577897 SPINK6Q6UWN8 80 aa8.37□□□□□ -1.07
SREBF1-217ENST00000577897 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
SREBF1-217ENST00000577897 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
SREBF1-217ENST00000577897 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
SREBF1-217ENST00000577897 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
SREBF1-217ENST00000577897 A0A087WSZ3 146 aa8.34□□□□□ -1.07
SREBF1-217ENST00000577897 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
SREBF1-217ENST00000577897 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
SREBF1-217ENST00000577897 J3KT08 172 aa8.31□□□□□ -1.08
SREBF1-217ENST00000577897 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
SREBF1-217ENST00000577897 A0A087WVE0 104 aa8.3□□□□□ -1.08
SREBF1-217ENST00000577897 MOBPQ13875 183 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms