RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
CUEDC1-206ENST00000577830 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
CUEDC1-206ENST00000577830 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
CUEDC1-206ENST00000577830 IGLV5-48A0A075B6I7 105 aa9.41□□□□□ -0.9
CUEDC1-206ENST00000577830 COL7A1Q02388 2944 aa9.4□□□□□ -0.91
CUEDC1-206ENST00000577830 UBE2AP49459 152 aa9.39□□□□□ -0.91
CUEDC1-206ENST00000577830 DSCR10P59022 87 aa9.37□□□□□ -0.91
CUEDC1-206ENST00000577830 PSPHP1O15172 72 aa9.37□□□□□ -0.91
CUEDC1-206ENST00000577830 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
CUEDC1-206ENST00000577830 K7EIL1 84 aa9.35□□□□□ -0.91
CUEDC1-206ENST00000577830 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
CUEDC1-206ENST00000577830 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
CUEDC1-206ENST00000577830 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
CUEDC1-206ENST00000577830 HCG22E2RYF7 251 aa9.33□□□□□ -0.92
CUEDC1-206ENST00000577830 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
CUEDC1-206ENST00000577830 LINC00208Q96KT6 92 aa9.32□□□□□ -0.92
CUEDC1-206ENST00000577830 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
CUEDC1-206ENST00000577830 H0Y9J4 135 aa9.31□□□□□ -0.92
CUEDC1-206ENST00000577830 SPRR1AP35321 89 aa9.3□□□□□ -0.92
CUEDC1-206ENST00000577830 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
CUEDC1-206ENST00000577830 TNP2Q05952 138 aa9.3□□□□□ -0.92
CUEDC1-206ENST00000577830 CMYA5Q8N3K9 4069 aa9.29□□□□□ -0.92
CUEDC1-206ENST00000577830 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
CUEDC1-206ENST00000577830 IGLV9-49A0A0B4J1Y8 123 aa9.27□□□□□ -0.93
CUEDC1-206ENST00000577830 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
CUEDC1-206ENST00000577830 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
CUEDC1-206ENST00000577830 MP68P56378 58 aa9.26□□□□□ -0.93
CUEDC1-206ENST00000577830 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
CUEDC1-206ENST00000577830 A0A0A0MQY5 61 aa9.25□□□□□ -0.93
CUEDC1-206ENST00000577830 SPRR4Q96PI1 79 aa9.25□□□□□ -0.93
CUEDC1-206ENST00000577830 DNAH10Q8IVF4 4471 aa9.24□□□□□ -0.93
CUEDC1-206ENST00000577830 IGLV5-37A0A075B6J1 123 aa9.24□□□□□ -0.93
CUEDC1-206ENST00000577830 C16orf90A8MZG2 172 aa9.23□□□□□ -0.93
CUEDC1-206ENST00000577830 CASC2Q6XLA1 102 aa9.22□□□□□ -0.93
CUEDC1-206ENST00000577830 LYSTQ99698 3801 aa9.21□□□□□ -0.94
CUEDC1-206ENST00000577830 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CUEDC1-206ENST00000577830 H0Y9P7 68 aa9.19□□□□□ -0.94
CUEDC1-206ENST00000577830 PCOTHQ58A44 107 aa9.18□□□□□ -0.94
CUEDC1-206ENST00000577830 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
CUEDC1-206ENST00000577830 ANAPC11Q9NYG5 84 aa9.17□□□□□ -0.94
CUEDC1-206ENST00000577830 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
CUEDC1-206ENST00000577830 HUWE1Q7Z6Z7 4374 aaKnown RBP9.16□□□□□ -0.94
CUEDC1-206ENST00000577830 PANO1I0J062 215 aa9.16□□□□□ -0.94
CUEDC1-206ENST00000577830 A0A1B0GW54 56 aa9.15□□□□□ -0.94
CUEDC1-206ENST00000577830 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
CUEDC1-206ENST00000577830 A8MUN3 132 aa9.12□□□□□ -0.95
CUEDC1-206ENST00000577830 SPINK6Q6UWN8 80 aa9.11□□□□□ -0.95
CUEDC1-206ENST00000577830 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
CUEDC1-206ENST00000577830 CNBPP62633 177 aaKnown RBP9.1□□□□□ -0.95
CUEDC1-206ENST00000577830 NDUFB1O75438 58 aa9.1□□□□□ -0.95
CUEDC1-206ENST00000577830 PRR15Q8IV56 129 aa9.1□□□□□ -0.95
CUEDC1-206ENST00000577830 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
CUEDC1-206ENST00000577830 KTN1-AS1Q86SY8 53 aa9.09□□□□□ -0.95
CUEDC1-206ENST00000577830 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.96
CUEDC1-206ENST00000577830 A8MU10 97 aa9.09□□□□□ -0.96
CUEDC1-206ENST00000577830 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.96
CUEDC1-206ENST00000577830 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
CUEDC1-206ENST00000577830 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
CUEDC1-206ENST00000577830 TGP01266 2768 aa9.07□□□□□ -0.96
CUEDC1-206ENST00000577830 DNHD1Q96M86 4753 aa9.07□□□□□ -0.96
CUEDC1-206ENST00000577830 A8MWP4 228 aa9.06□□□□□ -0.96
CUEDC1-206ENST00000577830 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
CUEDC1-206ENST00000577830 A6NED7 52 aa9.06□□□□□ -0.96
CUEDC1-206ENST00000577830 CDK2AP2O75956 126 aa9.05□□□□□ -0.96
CUEDC1-206ENST00000577830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
CUEDC1-206ENST00000577830 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
CUEDC1-206ENST00000577830 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
CUEDC1-206ENST00000577830 MOBPQ13875 183 aa9.04□□□□□ -0.96
CUEDC1-206ENST00000577830 LCE6AA0A183 80 aa9.03□□□□□ -0.96
CUEDC1-206ENST00000577830 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.97
CUEDC1-206ENST00000577830 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
CUEDC1-206ENST00000577830 KRTAP29-1A8MX34 341 aaPredicted RBP9□□□□□ -0.97
CUEDC1-206ENST00000577830 DNAH9Q9NYC9 4486 aa8.99□□□□□ -0.97
CUEDC1-206ENST00000577830 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
CUEDC1-206ENST00000577830 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
CUEDC1-206ENST00000577830 MMP24-AS1A0A0U1RRL7 71 aa8.96□□□□□ -0.97
CUEDC1-206ENST00000577830 Q1T7F1 81 aa8.95□□□□□ -0.98
CUEDC1-206ENST00000577830 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CUEDC1-206ENST00000577830 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
CUEDC1-206ENST00000577830 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
CUEDC1-206ENST00000577830 COA5Q86WW8 74 aa8.93□□□□□ -0.98
CUEDC1-206ENST00000577830 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
CUEDC1-206ENST00000577830 A0A087X002 238 aa8.92□□□□□ -0.98
CUEDC1-206ENST00000577830 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
CUEDC1-206ENST00000577830 MEGF8Q7Z7M0 2845 aa8.91□□□□□ -0.98
CUEDC1-206ENST00000577830 C8orf17Q9NRJ1 99 aa8.91□□□□□ -0.98
CUEDC1-206ENST00000577830 SPRR1BP22528 89 aa8.9□□□□□ -0.98
CUEDC1-206ENST00000577830 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.98
CUEDC1-206ENST00000577830 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
CUEDC1-206ENST00000577830 RTL8CO15255 209 aa8.89□□□□□ -0.99
CUEDC1-206ENST00000577830 PRAC1Q96KF2 57 aa8.88□□□□□ -0.99
CUEDC1-206ENST00000577830 PLECQ15149 4684 aaKnown RBP8.88□□□□□ -0.99
CUEDC1-206ENST00000577830 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
CUEDC1-206ENST00000577830 Q5VV11 94 aa8.87□□□□□ -0.99
CUEDC1-206ENST00000577830 A0A087WTM6 91 aa8.87□□□□□ -0.99
CUEDC1-206ENST00000577830 FBN3Q75N90 2809 aa8.86□□□□□ -0.99
CUEDC1-206ENST00000577830 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
CUEDC1-206ENST00000577830 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
CUEDC1-206ENST00000577830 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
CUEDC1-206ENST00000577830 IGLV5-52A0A0A0MRZ9 124 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms