RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DNAH5Q8TE73 4624 aa17.47■□□□□ 0.39
CTDNEP1-210ENST00000574322 UBL5Q9BZL1 73 aa17.46■□□□□ 0.39
CTDNEP1-210ENST00000574322 PSORS1C2Q9UIG4 136 aa17.46■□□□□ 0.39
CTDNEP1-210ENST00000574322 Q6ZSA8 131 aa17.45■□□□□ 0.38
CTDNEP1-210ENST00000574322 IGLV8-61A0A075B6I0 122 aa17.43■□□□□ 0.38
CTDNEP1-210ENST00000574322 DNAH8Q96JB1 4490 aa17.42■□□□□ 0.38
CTDNEP1-210ENST00000574322 A0A1B0GW54 56 aa17.42■□□□□ 0.38
CTDNEP1-210ENST00000574322 FAM30AQ9NZY2 134 aa17.42■□□□□ 0.38
CTDNEP1-210ENST00000574322 C1orf137Q5JT78 98 aa17.41■□□□□ 0.38
CTDNEP1-210ENST00000574322 EPPK1P58107 5090 aaKnown RBP17.41■□□□□ 0.38
CTDNEP1-210ENST00000574322 PKHD1P08F94 4074 aa17.41■□□□□ 0.38
CTDNEP1-210ENST00000574322 F8WEM9 126 aa17.4■□□□□ 0.38
CTDNEP1-210ENST00000574322 ATP5EP2Q5VTU8 51 aa17.39■□□□□ 0.37
CTDNEP1-210ENST00000574322 KRTAP10-1P60331 282 aa17.38■□□□□ 0.37
CTDNEP1-210ENST00000574322 CIRBP-AS1Q8TBR5 109 aa17.38■□□□□ 0.37
CTDNEP1-210ENST00000574322 Q6ZVQ6 151 aa17.35■□□□□ 0.37
CTDNEP1-210ENST00000574322 A0A1W2PNM2 257 aa17.35■□□□□ 0.37
CTDNEP1-210ENST00000574322 Q8NBF4 154 aa17.34■□□□□ 0.37
CTDNEP1-210ENST00000574322 ZNF861PO60384 105 aa17.33■□□□□ 0.37
CTDNEP1-210ENST00000574322 SPRR4Q96PI1 79 aa17.32■□□□□ 0.36
CTDNEP1-210ENST00000574322 IGKV3D-7A0A0C4DH55 119 aa17.31■□□□□ 0.36
CTDNEP1-210ENST00000574322 SCXQ7RTU7 201 aa17.31■□□□□ 0.36
CTDNEP1-210ENST00000574322 DYNC1H1Q14204 4646 aaKnown RBP17.29■□□□□ 0.36
CTDNEP1-210ENST00000574322 LINC00483Q53H64 154 aa17.29■□□□□ 0.36
CTDNEP1-210ENST00000574322 IGFL1Q6UW32 110 aa17.28■□□□□ 0.36
CTDNEP1-210ENST00000574322 ZNF706Q9Y5V0 76 aaPredicted RBP17.28■□□□□ 0.36
CTDNEP1-210ENST00000574322 SRRM2Q9UQ35 2752 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-210ENST00000574322 LRP1BQ9NZR2 4599 aa17.27■□□□□ 0.36
CTDNEP1-210ENST00000574322 IGLV7-43P04211 117 aa17.25■□□□□ 0.35
CTDNEP1-210ENST00000574322 CRYGAP11844 174 aa17.24■□□□□ 0.35
CTDNEP1-210ENST00000574322 CXCL6P80162 114 aa17.23■□□□□ 0.35
CTDNEP1-210ENST00000574322 HAMPP81172 84 aa17.19■□□□□ 0.34
CTDNEP1-210ENST00000574322 NREPQ16612 68 aa17.19■□□□□ 0.34
CTDNEP1-210ENST00000574322 HIST1H4AP62805 103 aaKnown RBP17.14■□□□□ 0.33
CTDNEP1-210ENST00000574322 FAM236AA0A1B0GUQ0 79 aa17.13■□□□□ 0.33
CTDNEP1-210ENST00000574322 FAM236BA0A1B0GV22 79 aa17.13■□□□□ 0.33
CTDNEP1-210ENST00000574322 RPL37AP61513 92 aaKnown RBP17.13■□□□□ 0.33
CTDNEP1-210ENST00000574322 A0A0G2JQZ4 141 aa17.13■□□□□ 0.33
CTDNEP1-210ENST00000574322 A0A087WVE0 104 aa17.07■□□□□ 0.32
CTDNEP1-210ENST00000574322 BIRC6Q9NR09 4857 aa17.07■□□□□ 0.32
CTDNEP1-210ENST00000574322 ANAPC13Q9BS18 74 aa17.07■□□□□ 0.32
CTDNEP1-210ENST00000574322 APOBP04114 4563 aaKnown RBP17.06■□□□□ 0.32
CTDNEP1-210ENST00000574322 CDK2AP2O75956 126 aa17.04■□□□□ 0.32
CTDNEP1-210ENST00000574322 BPY2O14599 106 aa17.03■□□□□ 0.32
CTDNEP1-210ENST00000574322 IGLV9-49A0A0B4J1Y8 123 aa17.01■□□□□ 0.31
CTDNEP1-210ENST00000574322 A0A087WSZ3 146 aa17■□□□□ 0.31
CTDNEP1-210ENST00000574322 C9orf153Q5TBE3 101 aa17■□□□□ 0.31
CTDNEP1-210ENST00000574322 KIAA1109Q2LD37 5005 aa16.97■□□□□ 0.31
CTDNEP1-210ENST00000574322 ANAPC11Q9NYG5 84 aa16.96■□□□□ 0.31
CTDNEP1-210ENST00000574322 ATOX1O00244 68 aa16.95■□□□□ 0.3
CTDNEP1-210ENST00000574322 RYR1P21817 5038 aa16.93■□□□□ 0.3
CTDNEP1-210ENST00000574322 MOBPQ13875 183 aa16.93■□□□□ 0.3
CTDNEP1-210ENST00000574322 IGKV4-1P06312 121 aa16.91■□□□□ 0.3
CTDNEP1-210ENST00000574322 SMR3BP02814 79 aaPredicted RBP16.89■□□□□ 0.29
CTDNEP1-210ENST00000574322 DSCR10P59022 87 aa16.87■□□□□ 0.29
CTDNEP1-210ENST00000574322 HSPG2P98160 4391 aa16.87■□□□□ 0.29
CTDNEP1-210ENST00000574322 Q8N9L7 120 aa16.85■□□□□ 0.29
CTDNEP1-210ENST00000574322 FAM229BQ4G0N7 80 aa16.84■□□□□ 0.29
CTDNEP1-210ENST00000574322 LINC00472Q9H8W2 130 aa16.84■□□□□ 0.29
CTDNEP1-210ENST00000574322 SSBP3-AS1Q7Z2R9 100 aa16.83■□□□□ 0.28
CTDNEP1-210ENST00000574322 VPS13BQ7Z7G8 4022 aa16.82■□□□□ 0.28
CTDNEP1-210ENST00000574322 KRTAP1-4P0C5Y4 121 aa16.77■□□□□ 0.28
CTDNEP1-210ENST00000574322 CD164Q04900 197 aa16.77■□□□□ 0.28
CTDNEP1-210ENST00000574322 SS18L2Q9UHA2 77 aa16.77■□□□□ 0.28
CTDNEP1-210ENST00000574322 FAT1Q14517 4588 aa16.75■□□□□ 0.27
CTDNEP1-210ENST00000574322 SERP2Q8N6R1 65 aa16.74■□□□□ 0.27
CTDNEP1-210ENST00000574322 FAM229AH3BQW9 127 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 K7EQZ3 153 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 SPINK6Q6UWN8 80 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 COX7CP15954 63 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 DEFB116Q30KQ4 102 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 Q8N1X5 172 aa16.73■□□□□ 0.27
CTDNEP1-210ENST00000574322 A0A087X002 238 aa16.72■□□□□ 0.27
CTDNEP1-210ENST00000574322 HRCT1Q6UXD1 115 aa16.72■□□□□ 0.27
CTDNEP1-210ENST00000574322 CCDC179H3BU77 68 aa16.71■□□□□ 0.27
CTDNEP1-210ENST00000574322 J3KT08 172 aa16.71■□□□□ 0.27
CTDNEP1-210ENST00000574322 UQCRQO14949 82 aa16.7■□□□□ 0.26
CTDNEP1-210ENST00000574322 KRTAP13-2Q52LG2 175 aa16.7■□□□□ 0.26
CTDNEP1-210ENST00000574322 SMIM20Q8N5G0 67 aa16.7■□□□□ 0.26
CTDNEP1-210ENST00000574322 Q96NJ1 140 aa16.7■□□□□ 0.26
CTDNEP1-210ENST00000574322 KRTAP17-1Q9BYP8 105 aa16.7■□□□□ 0.26
CTDNEP1-210ENST00000574322 Q5VSD8 79 aa16.69■□□□□ 0.26
CTDNEP1-210ENST00000574322 HERC2O95714 4834 aa16.67■□□□□ 0.26
CTDNEP1-210ENST00000574322 A8MWP4 228 aa16.65■□□□□ 0.26
CTDNEP1-210ENST00000574322 PLA2G1BP04054 148 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-210ENST00000574322 TRAV7A0A075B6U4 112 aa16.63■□□□□ 0.25
CTDNEP1-210ENST00000574322 KRTAP10-4P60372 401 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-210ENST00000574322 PRR15Q8IV56 129 aa16.62■□□□□ 0.25
CTDNEP1-210ENST00000574322 HCG22E2RYF7 251 aa16.58■□□□□ 0.24
CTDNEP1-210ENST00000574322 ASB16-AS1Q495Z4 193 aa16.57■□□□□ 0.24
CTDNEP1-210ENST00000574322 Q5XG85 94 aa16.54■□□□□ 0.24
CTDNEP1-210ENST00000574322 OCR1Q9BZK8 76 aa16.53■□□□□ 0.24
CTDNEP1-210ENST00000574322 NDUFB1O75438 58 aa16.52■□□□□ 0.24
CTDNEP1-210ENST00000574322 KRTAP4-5Q9BYR2 181 aa16.5■□□□□ 0.23
CTDNEP1-210ENST00000574322 KRTAP29-1A8MX34 341 aaPredicted RBP16.49■□□□□ 0.23
CTDNEP1-210ENST00000574322 TYMSOSQ8TAI1 123 aa16.46■□□□□ 0.23
CTDNEP1-210ENST00000574322 WFDC13Q8IUB5 93 aa16.41■□□□□ 0.22
CTDNEP1-210ENST00000574322 MMP24-AS1A0A0U1RRL7 71 aa16.4■□□□□ 0.22
CTDNEP1-210ENST00000574322 A0A1B0GVX0 72 aa16.4■□□□□ 0.22
CTDNEP1-210ENST00000574322 CASC2Q6XLA1 102 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms