RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 C4orf48Q5BLP8 95 aa19.16■□□□□ 0.66
CTDNEP1-209ENST00000574205 PPDPFLQ8WWR9 84 aa19.12■□□□□ 0.65
CTDNEP1-209ENST00000574205 OCIAD2Q56VL3 154 aa19.11■□□□□ 0.65
CTDNEP1-209ENST00000574205 CLEC2BQ92478 149 aa19.1■□□□□ 0.65
CTDNEP1-209ENST00000574205 SPINK1P00995 79 aa19.08■□□□□ 0.64
CTDNEP1-209ENST00000574205 HMCN2Q8NDA2 5059 aa19.06■□□□□ 0.64
CTDNEP1-209ENST00000574205 BATFQ16520 125 aa19.05■□□□□ 0.64
CTDNEP1-209ENST00000574205 F8WEM9 126 aa19.04■□□□□ 0.64
CTDNEP1-209ENST00000574205 SCGB1C2P0DMR2 95 aa19.03■□□□□ 0.64
CTDNEP1-209ENST00000574205 GHRHP01286 108 aa19.02■□□□□ 0.64
CTDNEP1-209ENST00000574205 DNAL4O96015 105 aa19■□□□□ 0.63
CTDNEP1-209ENST00000574205 SNHG12Q9BXW3 62 aa19■□□□□ 0.63
CTDNEP1-209ENST00000574205 RPS29P62273 56 aaKnown RBP19■□□□□ 0.63
CTDNEP1-209ENST00000574205 LST1O00453 97 aa18.93■□□□□ 0.62
CTDNEP1-209ENST00000574205 PRR4Q16378 134 aa18.93■□□□□ 0.62
CTDNEP1-209ENST00000574205 IGLV8-61A0A075B6I0 122 aa18.92■□□□□ 0.62
CTDNEP1-209ENST00000574205 NAA38Q9BRA0 125 aaKnown RBP18.92■□□□□ 0.62
CTDNEP1-209ENST00000574205 TRACP01848 142 aa18.91■□□□□ 0.62
CTDNEP1-209ENST00000574205 CD164Q04900 197 aa18.91■□□□□ 0.62
CTDNEP1-209ENST00000574205 RETNLBQ9BQ08 111 aa18.91■□□□□ 0.62
CTDNEP1-209ENST00000574205 ORMDL1Q9P0S3 153 aa18.91■□□□□ 0.62
CTDNEP1-209ENST00000574205 HRCT1Q6UXD1 115 aa18.9■□□□□ 0.62
CTDNEP1-209ENST00000574205 H3BQ85 93 aa18.89■□□□□ 0.61
CTDNEP1-209ENST00000574205 Q6JHZ5 121 aa18.89■□□□□ 0.61
CTDNEP1-209ENST00000574205 FABP2P12104 132 aa18.88■□□□□ 0.61
CTDNEP1-209ENST00000574205 NDUFV3P56181 108 aaKnown RBP18.87■□□□□ 0.61
CTDNEP1-209ENST00000574205 A0A0G2JQZ4 141 aa18.86■□□□□ 0.61
CTDNEP1-209ENST00000574205 LIMD2Q9BT23 127 aa18.83■□□□□ 0.6
CTDNEP1-209ENST00000574205 TMEM256-PLSCR3K7ERE1 68 aa18.82■□□□□ 0.6
CTDNEP1-209ENST00000574205 LYRM7Q5U5X0 104 aa18.82■□□□□ 0.6
CTDNEP1-209ENST00000574205 IGFL1Q6UW32 110 aa18.81■□□□□ 0.6
CTDNEP1-209ENST00000574205 H3BUT2 72 aa18.8■□□□□ 0.6
CTDNEP1-209ENST00000574205 TCL1BO95988 128 aa18.79■□□□□ 0.6
CTDNEP1-209ENST00000574205 TAX1BP3O14907 124 aa18.79■□□□□ 0.6
CTDNEP1-209ENST00000574205 ATXN8Q156A1 80 aa18.79■□□□□ 0.6
CTDNEP1-209ENST00000574205 C9orf118A6NHY6 69 aa18.77■□□□□ 0.6
CTDNEP1-209ENST00000574205 H3BMG7 143 aa18.76■□□□□ 0.59
CTDNEP1-209ENST00000574205 FP248Q71RG6 208 aaPredicted RBP18.74■□□□□ 0.59
CTDNEP1-209ENST00000574205 Q5XG85 94 aa18.72■□□□□ 0.59
CTDNEP1-209ENST00000574205 TRBV20-1A0A075B6N2 111 aa18.71■□□□□ 0.59
CTDNEP1-209ENST00000574205 UBE2V1Q13404 147 aa18.71■□□□□ 0.59
CTDNEP1-209ENST00000574205 IGLV7-46A0A075B6I9 117 aa18.7■□□□□ 0.58
CTDNEP1-209ENST00000574205 PCP4L1A6NKN8 68 aa18.69■□□□□ 0.58
CTDNEP1-209ENST00000574205 LRP2P98164 4655 aa18.69■□□□□ 0.58
CTDNEP1-209ENST00000574205 A0A1W2PPM0 123 aa18.66■□□□□ 0.58
CTDNEP1-209ENST00000574205 COL5A1-AS1Q5SY13 56 aa18.66■□□□□ 0.58
CTDNEP1-209ENST00000574205 BAALC-AS2P0C853 105 aa18.65■□□□□ 0.58
CTDNEP1-209ENST00000574205 LPAP08519 4548 aa18.64■□□□□ 0.57
CTDNEP1-209ENST00000574205 TRBV7-7A0A0K0K1E9 115 aa18.64■□□□□ 0.57
CTDNEP1-209ENST00000574205 Q6Q795 121 aa18.61■□□□□ 0.57
CTDNEP1-209ENST00000574205 TPRXLQ17RH7 258 aa18.6■□□□□ 0.57
CTDNEP1-209ENST00000574205 ANKRD29Q8N6D5 301 aa18.6■□□□□ 0.57
CTDNEP1-209ENST00000574205 A0A1B0GV72 72 aa18.59■□□□□ 0.57
CTDNEP1-209ENST00000574205 TEN1Q86WV5 123 aa18.59■□□□□ 0.57
CTDNEP1-209ENST00000574205 C9JAW5 83 aa18.52■□□□□ 0.56
CTDNEP1-209ENST00000574205 RBM3P98179 157 aaKnown RBP18.51■□□□□ 0.55
CTDNEP1-209ENST00000574205 C1orf195Q5TG92 126 aa18.51■□□□□ 0.55
CTDNEP1-209ENST00000574205 ASB16-AS1Q495Z4 193 aa18.5■□□□□ 0.55
CTDNEP1-209ENST00000574205 A0A1W2PNM2 257 aa18.49■□□□□ 0.55
CTDNEP1-209ENST00000574205 UBR4Q5T4S7 5183 aa18.46■□□□□ 0.55
CTDNEP1-209ENST00000574205 TRBV7-4A0A0J9YYF1 115 aa18.46■□□□□ 0.55
CTDNEP1-209ENST00000574205 KRTAP13-3Q3SY46 172 aa18.46■□□□□ 0.55
CTDNEP1-209ENST00000574205 SPCS1Q9Y6A9 102 aa18.46■□□□□ 0.55
CTDNEP1-209ENST00000574205 DSCR8Q96T75 97 aa18.45■□□□□ 0.54
CTDNEP1-209ENST00000574205 CDIP1Q9H305 208 aa18.45■□□□□ 0.54
CTDNEP1-209ENST00000574205 SS18L2Q9UHA2 77 aa18.45■□□□□ 0.54
CTDNEP1-209ENST00000574205 A0A087WSZ3 146 aa18.43■□□□□ 0.54
CTDNEP1-209ENST00000574205 JMJD7-PLA2G4BH0Y9G9 81 aa18.43■□□□□ 0.54
CTDNEP1-209ENST00000574205 CCKP06307 115 aa18.41■□□□□ 0.54
CTDNEP1-209ENST00000574205 H3BT86 120 aa18.39■□□□□ 0.53
CTDNEP1-209ENST00000574205 MTURNQ8N3F0 131 aa18.34■□□□□ 0.53
CTDNEP1-209ENST00000574205 VPS25Q9BRG1 176 aa18.31■□□□□ 0.52
CTDNEP1-209ENST00000574205 OBSCN-AS1Q96MR7 158 aa18.29■□□□□ 0.52
CTDNEP1-209ENST00000574205 K7EP34 96 aa18.28■□□□□ 0.52
CTDNEP1-209ENST00000574205 LOC110117498A0A087WWA1 95 aa18.27■□□□□ 0.51
CTDNEP1-209ENST00000574205 PDE6GP18545 87 aa18.26■□□□□ 0.51
CTDNEP1-209ENST00000574205 Q6ZQT0 140 aa18.24■□□□□ 0.51
CTDNEP1-209ENST00000574205 C14orf132Q9NPU4 83 aa18.24■□□□□ 0.51
CTDNEP1-209ENST00000574205 C9orf92A6NGG3 77 aa18.2■□□□□ 0.5
CTDNEP1-209ENST00000574205 Q96NJ1 140 aa18.2■□□□□ 0.5
CTDNEP1-209ENST00000574205 C21orf62-AS1Q17RA5 79 aa18.19■□□□□ 0.5
CTDNEP1-209ENST00000574205 GTF2H5Q6ZYL4 71 aa18.18■□□□□ 0.5
CTDNEP1-209ENST00000574205 XP32Q5T750 250 aa18.16■□□□□ 0.5
CTDNEP1-209ENST00000574205 A0A1B0GW54 56 aa18.14■□□□□ 0.49
CTDNEP1-209ENST00000574205 SMCPP49901 116 aaPredicted RBP18.14■□□□□ 0.49
CTDNEP1-209ENST00000574205 PRO0461Q9UI25 63 aa18.13■□□□□ 0.49
CTDNEP1-209ENST00000574205 LINC00472Q9H8W2 130 aa18.08■□□□□ 0.49
CTDNEP1-209ENST00000574205 SIGMAR1Q99720 223 aa18.04■□□□□ 0.48
CTDNEP1-209ENST00000574205 IGKV4-1P06312 121 aa18.03■□□□□ 0.48
CTDNEP1-209ENST00000574205 RNF213Q63HN8 5207 aa18.01■□□□□ 0.47
CTDNEP1-209ENST00000574205 DEFB116Q30KQ4 102 aa18■□□□□ 0.47
CTDNEP1-209ENST00000574205 F8W1H4 67 aa17.98■□□□□ 0.47
CTDNEP1-209ENST00000574205 SEC61BP60468 96 aaKnown RBP17.98■□□□□ 0.47
CTDNEP1-209ENST00000574205 MUC17Q685J3 4493 aa17.94■□□□□ 0.46
CTDNEP1-209ENST00000574205 J3KT08 172 aa17.9■□□□□ 0.46
CTDNEP1-209ENST00000574205 NREPQ16612 68 aa17.86■□□□□ 0.45
CTDNEP1-209ENST00000574205 RPL37P61927 97 aaKnown RBP17.85■□□□□ 0.45
CTDNEP1-209ENST00000574205 MUC2Q02817 5179 aa17.84■□□□□ 0.45
CTDNEP1-209ENST00000574205 DSCR10P59022 87 aa17.81■□□□□ 0.44
CTDNEP1-209ENST00000574205 LINC00313P59037 77 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms