RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 VAMP3Q15836 100 aa7.27□□□□□ -1.25
CNOT1-220ENST00000569916 C2orf91Q6ZV80 131 aa7.27□□□□□ -1.25
CNOT1-220ENST00000569916 LIMD2Q9BT23 127 aa7.27□□□□□ -1.25
CNOT1-220ENST00000569916 PRO1933Q9H354 126 aa7.27□□□□□ -1.25
CNOT1-220ENST00000569916 HIGD1BQ9P298 99 aa7.27□□□□□ -1.25
CNOT1-220ENST00000569916 CD164Q04900 197 aa7.26□□□□□ -1.25
CNOT1-220ENST00000569916 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
CNOT1-220ENST00000569916 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
CNOT1-220ENST00000569916 CFC1P0CG37 223 aa7.24□□□□□ -1.25
CNOT1-220ENST00000569916 Q6ZQY7 126 aa7.24□□□□□ -1.25
CNOT1-220ENST00000569916 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
CNOT1-220ENST00000569916 H7C2G1 150 aa7.23□□□□□ -1.25
CNOT1-220ENST00000569916 BVES-AS1Q5T3Y7 98 aa7.23□□□□□ -1.25
CNOT1-220ENST00000569916 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
CNOT1-220ENST00000569916 A0A0B4J2C4 111 aa7.21□□□□□ -1.26
CNOT1-220ENST00000569916 Q5XG85 94 aa7.21□□□□□ -1.26
CNOT1-220ENST00000569916 A0A0U1RQV1 116 aa7.2□□□□□ -1.26
CNOT1-220ENST00000569916 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
CNOT1-220ENST00000569916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-220ENST00000569916 RAB37Q96AX2 223 aa7.2□□□□□ -1.26
CNOT1-220ENST00000569916 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
CNOT1-220ENST00000569916 F8WEM9 126 aa7.19□□□□□ -1.26
CNOT1-220ENST00000569916 CEND1Q8N111 149 aa7.19□□□□□ -1.26
CNOT1-220ENST00000569916 XP32Q5T750 250 aa7.18□□□□□ -1.26
CNOT1-220ENST00000569916 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
CNOT1-220ENST00000569916 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
CNOT1-220ENST00000569916 FXYD2P54710 66 aa7.16□□□□□ -1.26
CNOT1-220ENST00000569916 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
CNOT1-220ENST00000569916 PPDPFLQ8WWR9 84 aa7.16□□□□□ -1.26
CNOT1-220ENST00000569916 C1orf195Q5TG92 126 aa7.15□□□□□ -1.26
CNOT1-220ENST00000569916 Q6JHZ5 121 aa7.15□□□□□ -1.26
CNOT1-220ENST00000569916 IGFL1Q6UW32 110 aa7.15□□□□□ -1.26
CNOT1-220ENST00000569916 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.26
CNOT1-220ENST00000569916 H0YGX0 51 aa7.14□□□□□ -1.27
CNOT1-220ENST00000569916 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
CNOT1-220ENST00000569916 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
CNOT1-220ENST00000569916 C9orf92A6NGG3 77 aa7.13□□□□□ -1.27
CNOT1-220ENST00000569916 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
CNOT1-220ENST00000569916 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
CNOT1-220ENST00000569916 HSD52Q0P140 79 aa7.12□□□□□ -1.27
CNOT1-220ENST00000569916 TSTD3H0UI37 97 aa7.11□□□□□ -1.27
CNOT1-220ENST00000569916 TCL1BO95988 128 aa7.11□□□□□ -1.27
CNOT1-220ENST00000569916 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
CNOT1-220ENST00000569916 TRBV7-7A0A0K0K1E9 115 aa7.1□□□□□ -1.27
CNOT1-220ENST00000569916 H3BUT2 72 aa7.1□□□□□ -1.27
CNOT1-220ENST00000569916 TRIAP1O43715 76 aa7.1□□□□□ -1.27
CNOT1-220ENST00000569916 A0A1B0GX51 115 aa7.09□□□□□ -1.27
CNOT1-220ENST00000569916 SNCGO76070 127 aa7.09□□□□□ -1.27
CNOT1-220ENST00000569916 K7ERJ3 54 aa7.08□□□□□ -1.28
CNOT1-220ENST00000569916 UQCR10Q9UDW1 63 aa7.08□□□□□ -1.28
CNOT1-220ENST00000569916 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
CNOT1-220ENST00000569916 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
CNOT1-220ENST00000569916 Q6Q795 121 aa7.03□□□□□ -1.28
CNOT1-220ENST00000569916 FABP2P12104 132 aa7.02□□□□□ -1.29
CNOT1-220ENST00000569916 PSMB2P49721 201 aa7.02□□□□□ -1.29
CNOT1-220ENST00000569916 H3BMG7 143 aa7.01□□□□□ -1.29
CNOT1-220ENST00000569916 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
CNOT1-220ENST00000569916 TEN1Q86WV5 123 aa7□□□□□ -1.29
CNOT1-220ENST00000569916 LST1O00453 97 aa6.99□□□□□ -1.29
CNOT1-220ENST00000569916 DNAL4O96015 105 aa6.99□□□□□ -1.29
CNOT1-220ENST00000569916 COX6CP09669 75 aa6.99□□□□□ -1.29
CNOT1-220ENST00000569916 ORMDL1Q9P0S3 153 aa6.99□□□□□ -1.29
CNOT1-220ENST00000569916 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
CNOT1-220ENST00000569916 A0A087WSZ3 146 aa6.97□□□□□ -1.29
CNOT1-220ENST00000569916 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
CNOT1-220ENST00000569916 H3BQ85 93 aa6.95□□□□□ -1.3
CNOT1-220ENST00000569916 A0A1B0GV72 72 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 M0R143 59 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 OBSCN-AS1Q96MR7 158 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 Q96NJ1 140 aa6.94□□□□□ -1.3
CNOT1-220ENST00000569916 TRACP01848 142 aa6.93□□□□□ -1.3
CNOT1-220ENST00000569916 ANKRD29Q8N6D5 301 aa6.92□□□□□ -1.3
CNOT1-220ENST00000569916 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
CNOT1-220ENST00000569916 UBE2V1Q13404 147 aa6.91□□□□□ -1.3
CNOT1-220ENST00000569916 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
CNOT1-220ENST00000569916 Q75L30 129 aa6.89□□□□□ -1.31
CNOT1-220ENST00000569916 A0A1B0GV90 55 aa6.87□□□□□ -1.31
CNOT1-220ENST00000569916 CCKP06307 115 aa6.87□□□□□ -1.31
CNOT1-220ENST00000569916 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
CNOT1-220ENST00000569916 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
CNOT1-220ENST00000569916 SIGMAR1Q99720 223 aa6.85□□□□□ -1.31
CNOT1-220ENST00000569916 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.31
CNOT1-220ENST00000569916 C20orf166-AS1Q96NR2 134 aa6.84□□□□□ -1.31
CNOT1-220ENST00000569916 A8MUU9 505 aa6.83□□□□□ -1.32
CNOT1-220ENST00000569916 BAALC-AS2P0C853 105 aa6.83□□□□□ -1.32
CNOT1-220ENST00000569916 DSCR10P59022 87 aa6.83□□□□□ -1.32
CNOT1-220ENST00000569916 MT1HP80294 61 aa6.83□□□□□ -1.32
CNOT1-220ENST00000569916 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
CNOT1-220ENST00000569916 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
CNOT1-220ENST00000569916 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
CNOT1-220ENST00000569916 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
CNOT1-220ENST00000569916 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
CNOT1-220ENST00000569916 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
CNOT1-220ENST00000569916 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
CNOT1-220ENST00000569916 SVIPQ8NHG7 77 aa6.8□□□□□ -1.32
CNOT1-220ENST00000569916 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
CNOT1-220ENST00000569916 KRTAP16-1A8MUX0 517 aa6.78□□□□□ -1.32
CNOT1-220ENST00000569916 C9JAW5 83 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms