RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 PRR4Q16378 134 aa3.54□□□□□ -1.84
UBE3A-205ENST00000566215 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
UBE3A-205ENST00000566215 C9orf129Q5T035 196 aaKnown RBP3.54□□□□□ -1.84
UBE3A-205ENST00000566215 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
UBE3A-205ENST00000566215 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 DNAL4O96015 105 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
UBE3A-205ENST00000566215 PFN2P35080 140 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 HIST1H4AP62805 103 aaKnown RBP3.53□□□□□ -1.84
UBE3A-205ENST00000566215 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 HIGD2BQ4VC39 106 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 C6orf226Q5I0X4 101 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
UBE3A-205ENST00000566215 CAMK2N2Q96S95 79 aa3.53□□□□□ -1.84
UBE3A-205ENST00000566215 A0A1B0GX51 115 aa3.53□□□□□ -1.85
UBE3A-205ENST00000566215 NDUFC2O95298 119 aa3.53□□□□□ -1.85
UBE3A-205ENST00000566215 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.85
UBE3A-205ENST00000566215 CLPSL2Q6UWE3 100 aa3.53□□□□□ -1.85
UBE3A-205ENST00000566215 XCL1P47992 114 aa3.52□□□□□ -1.85
UBE3A-205ENST00000566215 SEC61GP60059 68 aa3.52□□□□□ -1.85
UBE3A-205ENST00000566215 COX17Q14061 63 aa3.52□□□□□ -1.85
UBE3A-205ENST00000566215 GAGE2AQ6NT46 116 aa3.52□□□□□ -1.85
UBE3A-205ENST00000566215 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 Q6JHZ5 121 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 LINC00304Q8N9R0 145 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 UQCRQO14949 82 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 TMEM126AQ9H061 195 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 LINC00846Q9NV44 126 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
UBE3A-205ENST00000566215 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 C3orf22Q8N5N4 141 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 C6orf48Q9UBA6 75 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 NCR3O14931 201 aa3.5□□□□□ -1.85
UBE3A-205ENST00000566215 CCKP06307 115 aa3.49□□□□□ -1.85
UBE3A-205ENST00000566215 JMJD7-PLA2G4BH0Y9G9 81 aa3.49□□□□□ -1.85
UBE3A-205ENST00000566215 Q8NDZ9 215 aa3.49□□□□□ -1.85
UBE3A-205ENST00000566215 ATOX1O00244 68 aa3.49□□□□□ -1.85
UBE3A-205ENST00000566215 COX7CP15954 63 aa3.49□□□□□ -1.85
UBE3A-205ENST00000566215 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
UBE3A-205ENST00000566215 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-205ENST00000566215 TMEM256-PLSCR3K7ERE1 68 aa3.48□□□□□ -1.85
UBE3A-205ENST00000566215 MT1HP80294 61 aa3.48□□□□□ -1.85
UBE3A-205ENST00000566215 A0A087X002 238 aa3.48□□□□□ -1.85
UBE3A-205ENST00000566215 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 SPINK1P00995 79 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
UBE3A-205ENST00000566215 LINC00483Q53H64 154 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 LINC00575Q6W349 94 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 IGKV3D-7A0A0C4DH55 119 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
UBE3A-205ENST00000566215 IGLV6-57P01721 117 aa3.46□□□□□ -1.86
UBE3A-205ENST00000566215 S100A7L2Q5SY68 101 aa3.46□□□□□ -1.86
UBE3A-205ENST00000566215 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
UBE3A-205ENST00000566215 UNQ6190/PRO20217Q6UXQ8 127 aa3.46□□□□□ -1.86
UBE3A-205ENST00000566215 ZNF706Q9Y5V0 76 aaPredicted RBP3.46□□□□□ -1.86
UBE3A-205ENST00000566215 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
UBE3A-205ENST00000566215 SERP2Q8N6R1 65 aa3.45□□□□□ -1.86
UBE3A-205ENST00000566215 A0A087WVE0 104 aa3.45□□□□□ -1.86
UBE3A-205ENST00000566215 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
UBE3A-205ENST00000566215 TRBV10-3A0A0K0K1G6 114 aa3.45□□□□□ -1.86
UBE3A-205ENST00000566215 FAM19A5Q7Z5A7 132 aaPredicted RBP3.45□□□□□ -1.86
UBE3A-205ENST00000566215 Q6ZQT0 140 aa3.45□□□□□ -1.86
UBE3A-205ENST00000566215 hADV29S1A0JD25 119 aa3.44□□□□□ -1.86
UBE3A-205ENST00000566215 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
UBE3A-205ENST00000566215 H3BQ85 93 aa3.44□□□□□ -1.86
UBE3A-205ENST00000566215 UBE2BP63146 152 aa3.43□□□□□ -1.86
UBE3A-205ENST00000566215 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
UBE3A-205ENST00000566215 RBM3P98179 157 aaKnown RBP3.43□□□□□ -1.86
UBE3A-205ENST00000566215 TRBV7-6A0A0J9YX20 115 aa3.43□□□□□ -1.86
UBE3A-205ENST00000566215 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
UBE3A-205ENST00000566215 PDE6GP18545 87 aa3.42□□□□□ -1.86
UBE3A-205ENST00000566215 RPS28P62857 69 aaKnown RBP3.42□□□□□ -1.86
UBE3A-205ENST00000566215 SSBP3-AS1Q7Z2R9 100 aa3.42□□□□□ -1.86
UBE3A-205ENST00000566215 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
UBE3A-205ENST00000566215 V9GYY9 64 aa3.42□□□□□ -1.86
UBE3A-205ENST00000566215 Q6ZQY7 126 aa3.42□□□□□ -1.86
UBE3A-205ENST00000566215 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
UBE3A-205ENST00000566215 TRAV23DV6A0A075B6W5 121 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 TMEM258P61165 79 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 Q5XG85 94 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 FAM19A1Q7Z5A9 133 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 TRBV7-4A0A0J9YYF1 115 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 VPREB1P12018 145 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 ELOF1P60002 83 aaKnown RBP3.41□□□□□ -1.86
UBE3A-205ENST00000566215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
UBE3A-205ENST00000566215 Q8N377 158 aa3.41□□□□□ -1.86
UBE3A-205ENST00000566215 J3KT08 172 aa3.4□□□□□ -1.86
UBE3A-205ENST00000566215 ZNF73O43830 326 aaPredicted RBP3.4□□□□□ -1.86
UBE3A-205ENST00000566215 SPRR1AP35321 89 aa3.4□□□□□ -1.86
UBE3A-205ENST00000566215 XAGE1AQ9HD64 81 aa3.4□□□□□ -1.86
UBE3A-205ENST00000566215 LAMTOR3Q9UHA4 124 aa3.4□□□□□ -1.86
UBE3A-205ENST00000566215 GHRHP01286 108 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms