RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
SMG1-211ENST00000565324 CHD7Q9P2D1 2997 aa3.25□□□□□ -1.89
SMG1-211ENST00000565324 BAHCC1Q9P281 2608 aa3.25□□□□□ -1.89
SMG1-211ENST00000565324 SPINK7P58062 85 aa3.24□□□□□ -1.89
SMG1-211ENST00000565324 FAM229BQ4G0N7 80 aa3.24□□□□□ -1.89
SMG1-211ENST00000565324 KRTAP16-1A8MUX0 517 aa3.24□□□□□ -1.89
SMG1-211ENST00000565324 ROMO1P60602 79 aa3.24□□□□□ -1.89
SMG1-211ENST00000565324 DMDP11532 3685 aa3.24□□□□□ -1.89
SMG1-211ENST00000565324 SPEGQ15772 3267 aa3.23□□□□□ -1.89
SMG1-211ENST00000565324 REV3LO60673 3130 aa3.22□□□□□ -1.89
SMG1-211ENST00000565324 Q6ZSA8 131 aa3.22□□□□□ -1.89
SMG1-211ENST00000565324 S4R3F8 94 aa3.22□□□□□ -1.89
SMG1-211ENST00000565324 A0A1W2PNN7 141 aa3.22□□□□□ -1.89
SMG1-211ENST00000565324 C19orf73Q9NVV2 129 aa3.22□□□□□ -1.89
SMG1-211ENST00000565324 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
SMG1-211ENST00000565324 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.9
SMG1-211ENST00000565324 R4GN34 69 aa3.21□□□□□ -1.9
SMG1-211ENST00000565324 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
SMG1-211ENST00000565324 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
SMG1-211ENST00000565324 A0A0G2JQZ4 141 aa3.21□□□□□ -1.9
SMG1-211ENST00000565324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.21□□□□□ -1.9
SMG1-211ENST00000565324 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
SMG1-211ENST00000565324 KRTAP24-1Q3LI83 254 aa3.2□□□□□ -1.9
SMG1-211ENST00000565324 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
SMG1-211ENST00000565324 VPS13AQ96RL7 3174 aa3.2□□□□□ -1.9
SMG1-211ENST00000565324 APCP25054 2843 aa3.19□□□□□ -1.9
SMG1-211ENST00000565324 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
SMG1-211ENST00000565324 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
SMG1-211ENST00000565324 UBR5O95071 2799 aaPredicted RBP3.19□□□□□ -1.9
SMG1-211ENST00000565324 ITPR2Q14571 2701 aa3.18□□□□□ -1.9
SMG1-211ENST00000565324 Q5W150 140 aa3.17□□□□□ -1.9
SMG1-211ENST00000565324 ASPMQ8IZT6 3477 aa3.17□□□□□ -1.9
SMG1-211ENST00000565324 CHD6Q8TD26 2715 aa3.17□□□□□ -1.9
SMG1-211ENST00000565324 FLNAP21333 2647 aaKnown RBP3.16□□□□□ -1.9
SMG1-211ENST00000565324 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 K7EIL1 84 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 HECTD1Q9ULT8 2610 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 KRTAP10-11P60412 298 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 LAMA1P25391 3075 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 CELSR3Q9NYQ7 3312 aa3.16□□□□□ -1.9
SMG1-211ENST00000565324 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.9
SMG1-211ENST00000565324 SMR3BP02814 79 aaPredicted RBP3.15□□□□□ -1.9
SMG1-211ENST00000565324 FREM2Q5SZK8 3169 aa3.15□□□□□ -1.91
SMG1-211ENST00000565324 M0R2T5 61 aa3.14□□□□□ -1.91
SMG1-211ENST00000565324 SPRR1BP22528 89 aa3.14□□□□□ -1.91
SMG1-211ENST00000565324 CFAP46Q8IYW2 2715 aa3.14□□□□□ -1.91
SMG1-211ENST00000565324 A0A096LNT2 108 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 ZNF292O60281 2723 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 SPRR1AP35321 89 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 PLAC8Q9NZF1 115 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 ATRQ13535 2644 aa3.13□□□□□ -1.91
SMG1-211ENST00000565324 DSPP15924 2871 aaKnown RBP3.12□□□□□ -1.91
SMG1-211ENST00000565324 TRIOO75962 3097 aa3.12□□□□□ -1.91
SMG1-211ENST00000565324 HELZ2Q9BYK8 2649 aaKnown RBP3.12□□□□□ -1.91
SMG1-211ENST00000565324 CFAP54Q96N23 3096 aa3.12□□□□□ -1.91
SMG1-211ENST00000565324 CHD9Q3L8U1 2897 aa3.12□□□□□ -1.91
SMG1-211ENST00000565324 A0A087X002 238 aa3.12□□□□□ -1.91
SMG1-211ENST00000565324 Q6ZR54 194 aa3.11□□□□□ -1.91
SMG1-211ENST00000565324 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
SMG1-211ENST00000565324 M0QZ58 72 aa3.1□□□□□ -1.91
SMG1-211ENST00000565324 SEC61BP60468 96 aaKnown RBP3.1□□□□□ -1.91
SMG1-211ENST00000565324 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
SMG1-211ENST00000565324 SETXQ7Z333 2677 aaKnown RBP3.1□□□□□ -1.91
SMG1-211ENST00000565324 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
SMG1-211ENST00000565324 MAST4O15021 2626 aa3.1□□□□□ -1.91
SMG1-211ENST00000565324 STAB1Q9NY15 2570 aa3.09□□□□□ -1.91
SMG1-211ENST00000565324 ITPR3Q14573 2671 aa3.09□□□□□ -1.91
SMG1-211ENST00000565324 DCHS1Q96JQ0 3298 aa3.09□□□□□ -1.92
SMG1-211ENST00000565324 A6NN06 94 aa3.08□□□□□ -1.92
SMG1-211ENST00000565324 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
SMG1-211ENST00000565324 ZFHX4Q86UP3 3567 aa3.08□□□□□ -1.92
SMG1-211ENST00000565324 TEP1Q99973 2627 aaKnown RBP3.07□□□□□ -1.92
SMG1-211ENST00000565324 LAMA5O15230 3695 aa3.07□□□□□ -1.92
SMG1-211ENST00000565324 OXTP01178 125 aa3.07□□□□□ -1.92
SMG1-211ENST00000565324 TEX15Q9BXT5 2789 aa3.07□□□□□ -1.92
SMG1-211ENST00000565324 NOTCH1P46531 2555 aa3.07□□□□□ -1.92
SMG1-211ENST00000565324 PANO1I0J062 215 aa3.06□□□□□ -1.92
SMG1-211ENST00000565324 KRTAP26-1Q6PEX3 210 aa3.06□□□□□ -1.92
SMG1-211ENST00000565324 Q8NDZ9 215 aa3.06□□□□□ -1.92
SMG1-211ENST00000565324 UNC79Q9P2D8 2635 aa3.06□□□□□ -1.92
SMG1-211ENST00000565324 FRYLO94915 3013 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 MGAQ8IWI9 3026 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 KRTAP10-3P60369 221 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 COL6A5A8TX70 2615 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 TACC2O95359 2948 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 ITPR1Q14643 2758 aa3.05□□□□□ -1.92
SMG1-211ENST00000565324 KRTAP29-1A8MX34 341 aaPredicted RBP3.04□□□□□ -1.92
SMG1-211ENST00000565324 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
SMG1-211ENST00000565324 CFAP47Q6ZTR5 3102 aa3.03□□□□□ -1.92
SMG1-211ENST00000565324 STAB2Q8WWQ8 2551 aa3.03□□□□□ -1.92
SMG1-211ENST00000565324 LOC400499M0QZD8 3231 aa3.03□□□□□ -1.93
SMG1-211ENST00000565324 DMXL1Q9Y485 3027 aa3.02□□□□□ -1.93
SMG1-211ENST00000565324 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
SMG1-211ENST00000565324 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
SMG1-211ENST00000565324 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
SMG1-211ENST00000565324 LCE6AA0A183 80 aa3□□□□□ -1.93
SMG1-211ENST00000565324 NSD1Q96L73 2696 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms