RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
NME3-205ENST00000563854 TCL1BO95988 128 aa9.56□□□□□ -0.88
NME3-205ENST00000563854 COX8AP10176 69 aa9.51□□□□□ -0.89
NME3-205ENST00000563854 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
NME3-205ENST00000563854 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
NME3-205ENST00000563854 LCE2CQ5TA81 110 aa9.5□□□□□ -0.89
NME3-205ENST00000563854 Q6JHZ5 121 aa9.5□□□□□ -0.89
NME3-205ENST00000563854 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
NME3-205ENST00000563854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.5□□□□□ -0.89
NME3-205ENST00000563854 RPL37P61927 97 aaKnown RBP9.48□□□□□ -0.89
NME3-205ENST00000563854 OCIAD2Q56VL3 154 aa9.48□□□□□ -0.89
NME3-205ENST00000563854 TRBV7-7A0A0K0K1E9 115 aa9.47□□□□□ -0.89
NME3-205ENST00000563854 C14orf144Q96I85 54 aa9.47□□□□□ -0.89
NME3-205ENST00000563854 SNHG12Q9BXW3 62 aa9.47□□□□□ -0.89
NME3-205ENST00000563854 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
NME3-205ENST00000563854 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
NME3-205ENST00000563854 H3BUT2 72 aa9.45□□□□□ -0.9
NME3-205ENST00000563854 TMA7Q9Y2S6 64 aaKnown RBP9.45□□□□□ -0.9
NME3-205ENST00000563854 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
NME3-205ENST00000563854 DLEU1O43261 78 aa9.44□□□□□ -0.9
NME3-205ENST00000563854 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
NME3-205ENST00000563854 CFC1P0CG37 223 aa9.43□□□□□ -0.9
NME3-205ENST00000563854 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
NME3-205ENST00000563854 PPDPFLQ8WWR9 84 aa9.43□□□□□ -0.9
NME3-205ENST00000563854 MT1HP80294 61 aa9.42□□□□□ -0.9
NME3-205ENST00000563854 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
NME3-205ENST00000563854 VAMP8Q9BV40 100 aa9.4□□□□□ -0.9
NME3-205ENST00000563854 SNCGO76070 127 aa9.39□□□□□ -0.91
NME3-205ENST00000563854 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
NME3-205ENST00000563854 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
NME3-205ENST00000563854 HIGD1BQ9P298 99 aa9.38□□□□□ -0.91
NME3-205ENST00000563854 LST1O00453 97 aa9.37□□□□□ -0.91
NME3-205ENST00000563854 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
NME3-205ENST00000563854 C2orf91Q6ZV80 131 aa9.37□□□□□ -0.91
NME3-205ENST00000563854 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
NME3-205ENST00000563854 H0YGX0 51 aa9.36□□□□□ -0.91
NME3-205ENST00000563854 NDUFV3P56181 108 aaKnown RBP9.33□□□□□ -0.92
NME3-205ENST00000563854 CEND1Q8N111 149 aa9.33□□□□□ -0.92
NME3-205ENST00000563854 M0R2T5 61 aa9.32□□□□□ -0.92
NME3-205ENST00000563854 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
NME3-205ENST00000563854 TMEM238LA0A1B0GVL6 79 aa9.31□□□□□ -0.92
NME3-205ENST00000563854 A6NJY4 79 aa9.31□□□□□ -0.92
NME3-205ENST00000563854 FABP2P12104 132 aa9.31□□□□□ -0.92
NME3-205ENST00000563854 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
NME3-205ENST00000563854 CRCT1Q9UGL9 99 aa9.3□□□□□ -0.92
NME3-205ENST00000563854 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
NME3-205ENST00000563854 FXYD2P54710 66 aa9.29□□□□□ -0.92
NME3-205ENST00000563854 TEN1Q86WV5 123 aa9.29□□□□□ -0.92
NME3-205ENST00000563854 Q96NJ1 140 aa9.29□□□□□ -0.92
NME3-205ENST00000563854 A0A087WSZ3 146 aa9.28□□□□□ -0.92
NME3-205ENST00000563854 H3BMG7 143 aa9.28□□□□□ -0.92
NME3-205ENST00000563854 Q6Q795 121 aa9.28□□□□□ -0.92
NME3-205ENST00000563854 Q75L30 129 aa9.28□□□□□ -0.92
NME3-205ENST00000563854 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
NME3-205ENST00000563854 TRIAP1O43715 76 aa9.26□□□□□ -0.93
NME3-205ENST00000563854 A0A1B0GX51 115 aa9.25□□□□□ -0.93
NME3-205ENST00000563854 GHRHP01286 108 aa9.25□□□□□ -0.93
NME3-205ENST00000563854 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
NME3-205ENST00000563854 A0A1B0GV72 72 aa9.24□□□□□ -0.93
NME3-205ENST00000563854 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
NME3-205ENST00000563854 PSMB2P49721 201 aa9.22□□□□□ -0.93
NME3-205ENST00000563854 K7ERJ3 54 aa9.21□□□□□ -0.94
NME3-205ENST00000563854 DNAL4O96015 105 aa9.21□□□□□ -0.94
NME3-205ENST00000563854 SIGMAR1Q99720 223 aa9.21□□□□□ -0.94
NME3-205ENST00000563854 A0A1W2PNM2 257 aa9.19□□□□□ -0.94
NME3-205ENST00000563854 DSCR10P59022 87 aa9.19□□□□□ -0.94
NME3-205ENST00000563854 HSD52Q0P140 79 aa9.19□□□□□ -0.94
NME3-205ENST00000563854 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
NME3-205ENST00000563854 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
NME3-205ENST00000563854 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
NME3-205ENST00000563854 ANKRD29Q8N6D5 301 aa9.16□□□□□ -0.94
NME3-205ENST00000563854 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.94
NME3-205ENST00000563854 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.94
NME3-205ENST00000563854 A8MUU9 505 aa9.14□□□□□ -0.95
NME3-205ENST00000563854 COX6CP09669 75 aa9.13□□□□□ -0.95
NME3-205ENST00000563854 IGKV4-1P06312 121 aa9.12□□□□□ -0.95
NME3-205ENST00000563854 TRBV7-4A0A0J9YYF1 115 aa9.1□□□□□ -0.95
NME3-205ENST00000563854 H3BQ85 93 aa9.1□□□□□ -0.95
NME3-205ENST00000563854 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
NME3-205ENST00000563854 DEFB116Q30KQ4 102 aa9.09□□□□□ -0.95
NME3-205ENST00000563854 TRBV20-1A0A075B6N2 111 aa9.08□□□□□ -0.96
NME3-205ENST00000563854 TRACP01848 142 aa9.08□□□□□ -0.96
NME3-205ENST00000563854 CCKP06307 115 aa9.08□□□□□ -0.96
NME3-205ENST00000563854 LINC00313P59037 77 aa9.08□□□□□ -0.96
NME3-205ENST00000563854 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
NME3-205ENST00000563854 SMIM6P0DI80 62 aa9.07□□□□□ -0.96
NME3-205ENST00000563854 VPS25Q9BRG1 176 aa9.06□□□□□ -0.96
NME3-205ENST00000563854 SCGB1C2P0DMR2 95 aa9.05□□□□□ -0.96
NME3-205ENST00000563854 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
NME3-205ENST00000563854 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
NME3-205ENST00000563854 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
NME3-205ENST00000563854 KRTAP16-1A8MUX0 517 aa9.01□□□□□ -0.97
NME3-205ENST00000563854 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
NME3-205ENST00000563854 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
NME3-205ENST00000563854 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
NME3-205ENST00000563854 RBM3P98179 157 aaKnown RBP8.97□□□□□ -0.97
NME3-205ENST00000563854 DSCR8Q96T75 97 aa8.97□□□□□ -0.97
NME3-205ENST00000563854 BAALC-AS2P0C853 105 aa8.93□□□□□ -0.98
NME3-205ENST00000563854 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
NME3-205ENST00000563854 C9JAW5 83 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms