RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 UBE2BP63146 152 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 HSD52Q0P140 79 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 Q5VSD8 79 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 SPRR1AP35321 89 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 BATFQ16520 125 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 CEND1Q8N111 149 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 COPS9Q8WXC6 57 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 KCNQ1DNQ9H478 68 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 TNXBP22105 4242 aa3.17□□□□□ -1.9
HERPUD1-207ENST00000563781 C9JAW5 83 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 BCE1O60756 84 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 CFC1P0CG37 223 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 ANKRD29Q8N6D5 301 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 SNHG12Q9BXW3 62 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 DHRS4-AS1Q9P1J3 65 aa3.16□□□□□ -1.9
HERPUD1-207ENST00000563781 IGLV8-61A0A075B6I0 122 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 TRAV13-2A0A0B4J235 113 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 A0A0B4J2C4 111 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 IGLV7-43P04211 117 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 CXCL6P80162 114 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 S100A7L2Q5SY68 101 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 BVES-AS1Q5T3Y7 98 aa3.15□□□□□ -1.91
HERPUD1-207ENST00000563781 NDUFS5O43920 106 aa3.14□□□□□ -1.91
HERPUD1-207ENST00000563781 SMIM11BQ8TCY0 68 aa3.14□□□□□ -1.91
HERPUD1-207ENST00000563781 ANAPC13Q9BS18 74 aa3.14□□□□□ -1.91
HERPUD1-207ENST00000563781 ETDCA0A1B0GVM5 59 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 K7ERJ3 54 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 ZNF73O43830 326 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 ZNF861PO60384 105 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 HINT1P49773 126 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 PRLHP81277 87 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 C6orf99Q4VX62 202 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 COL5A1-AS1Q5SY13 56 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 LYRM7Q5U5X0 104 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 Q8N377 158 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 DIRC1Q969H9 104 aa3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 NHP2Q9NX24 153 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-207ENST00000563781 H0Y9J4 135 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 ERC2-IT1O76042 136 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 UBE2AP49459 152 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 PSMB2P49721 201 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 SMCR5Q8TEV8 140 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 RAB37Q96AX2 223 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 Q9BRP9 147 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 PRO1854Q9UHT4 67 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
HERPUD1-207ENST00000563781 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 H7C2G1 150 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 J3QR89 54 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 INAFM2P0DMQ5 153 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 COX7BP24311 80 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 SPINK6Q6UWN8 80 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 Q6ZRX8 168 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 NAA38Q9BRA0 125 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
HERPUD1-207ENST00000563781 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
HERPUD1-207ENST00000563781 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
HERPUD1-207ENST00000563781 MT3P25713 68 aa3.1□□□□□ -1.91
HERPUD1-207ENST00000563781 GTF2H5Q6ZYL4 71 aa3.1□□□□□ -1.91
HERPUD1-207ENST00000563781 HIGD2AQ9BW72 106 aa3.1□□□□□ -1.91
HERPUD1-207ENST00000563781 LINC00575Q6W349 94 aa3.09□□□□□ -1.91
HERPUD1-207ENST00000563781 Q1RN00 199 aa3.08□□□□□ -1.92
HERPUD1-207ENST00000563781 ST20-AS1Q8NBB2 130 aa3.08□□□□□ -1.92
HERPUD1-207ENST00000563781 SPRR4Q96PI1 79 aa3.08□□□□□ -1.92
HERPUD1-207ENST00000563781 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
HERPUD1-207ENST00000563781 DMBT1Q9UGM3 2413 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 H0YGX0 51 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 TAX1BP3O14907 124 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 MT1HL1P0DM35 61 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 LINC00483Q53H64 154 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 Q5XG85 94 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 LINC01600Q96MT4 127 aa3.07□□□□□ -1.92
HERPUD1-207ENST00000563781 IGLV5-48A0A075B6I7 105 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 hADV29S1A0JD25 119 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 PSPHP1O15172 72 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 SPRR1BP22528 89 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 MP68P56378 58 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 CLEC2BQ92478 149 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 ZNF706Q9Y5V0 76 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-207ENST00000563781 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
HERPUD1-207ENST00000563781 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
HERPUD1-207ENST00000563781 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
HERPUD1-207ENST00000563781 Q6Q795 121 aa3.05□□□□□ -1.92
HERPUD1-207ENST00000563781 Q6ZQY7 126 aa3.05□□□□□ -1.92
HERPUD1-207ENST00000563781 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms