RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 RPL37AP61513 92 aaKnown RBP13.32□□□□□ -0.28
LINC01960-201ENST00000563759 RBM3P98179 157 aaKnown RBP13.32□□□□□ -0.28
LINC01960-201ENST00000563759 J3QR89 54 aa13.31□□□□□ -0.28
LINC01960-201ENST00000563759 SPRR4Q96PI1 79 aa13.31□□□□□ -0.28
LINC01960-201ENST00000563759 F8WEM9 126 aa13.29□□□□□ -0.28
LINC01960-201ENST00000563759 SPRR1BP22528 89 aa13.29□□□□□ -0.28
LINC01960-201ENST00000563759 SMIM29Q86T20 159 aa13.28□□□□□ -0.28
LINC01960-201ENST00000563759 DSCR8Q96T75 97 aa13.28□□□□□ -0.28
LINC01960-201ENST00000563759 CDK2AP2O75956 126 aa13.25□□□□□ -0.29
LINC01960-201ENST00000563759 LINC00483Q53H64 154 aa13.23□□□□□ -0.29
LINC01960-201ENST00000563759 EPPK1P58107 5090 aaKnown RBP13.22□□□□□ -0.29
LINC01960-201ENST00000563759 LOC110117498A0A087WWA1 95 aa13.21□□□□□ -0.29
LINC01960-201ENST00000563759 TRBV7-4A0A0J9YYF1 115 aa13.21□□□□□ -0.3
LINC01960-201ENST00000563759 PDE6GP18545 87 aa13.19□□□□□ -0.3
LINC01960-201ENST00000563759 Q6ZQT0 140 aa13.19□□□□□ -0.3
LINC01960-201ENST00000563759 ANAPC11Q9NYG5 84 aa13.18□□□□□ -0.3
LINC01960-201ENST00000563759 CCKP06307 115 aa13.17□□□□□ -0.3
LINC01960-201ENST00000563759 IGLV9-49A0A0B4J1Y8 123 aa13.16□□□□□ -0.3
LINC01960-201ENST00000563759 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
LINC01960-201ENST00000563759 FAT1Q14517 4588 aa13.15□□□□□ -0.3
LINC01960-201ENST00000563759 C9orf153Q5TBE3 101 aa13.14□□□□□ -0.31
LINC01960-201ENST00000563759 IGLV8-61A0A075B6I0 122 aa13.14□□□□□ -0.31
LINC01960-201ENST00000563759 FAM229AH3BQW9 127 aa13.14□□□□□ -0.31
LINC01960-201ENST00000563759 FAM240AA0A1B0GVK7 77 aa13.13□□□□□ -0.31
LINC01960-201ENST00000563759 HSPG2P98160 4391 aa13.13□□□□□ -0.31
LINC01960-201ENST00000563759 PLA2G1BP04054 148 aaKnown RBP13.12□□□□□ -0.31
LINC01960-201ENST00000563759 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
LINC01960-201ENST00000563759 SIGMAR1Q99720 223 aa13.12□□□□□ -0.31
LINC01960-201ENST00000563759 RYR1P21817 5038 aa13.11□□□□□ -0.31
LINC01960-201ENST00000563759 IGFL1Q6UW32 110 aa13.1□□□□□ -0.31
LINC01960-201ENST00000563759 ACYP1P07311 99 aa13.1□□□□□ -0.31
LINC01960-201ENST00000563759 Q6JHZ5 121 aa13.1□□□□□ -0.31
LINC01960-201ENST00000563759 MOBPQ13875 183 aa13.09□□□□□ -0.31
LINC01960-201ENST00000563759 A0A0G2JQZ4 141 aa13.08□□□□□ -0.32
LINC01960-201ENST00000563759 Q8NBF4 154 aa13.08□□□□□ -0.32
LINC01960-201ENST00000563759 Q5VSD8 79 aa13.07□□□□□ -0.32
LINC01960-201ENST00000563759 KIAA1109Q2LD37 5005 aa13.06□□□□□ -0.32
LINC01960-201ENST00000563759 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
LINC01960-201ENST00000563759 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
LINC01960-201ENST00000563759 A0A1W2PNM2 257 aa13.04□□□□□ -0.32
LINC01960-201ENST00000563759 A0A087X002 238 aa13.02□□□□□ -0.32
LINC01960-201ENST00000563759 LINC00846Q9NV44 126 aa13.02□□□□□ -0.33
LINC01960-201ENST00000563759 CRYGAP11844 174 aa13.01□□□□□ -0.33
LINC01960-201ENST00000563759 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
LINC01960-201ENST00000563759 KRTAP13-2Q52LG2 175 aa12.96□□□□□ -0.33
LINC01960-201ENST00000563759 A0A1B0GW54 56 aa12.95□□□□□ -0.34
LINC01960-201ENST00000563759 UBL5Q9BZL1 73 aa12.95□□□□□ -0.34
LINC01960-201ENST00000563759 PKHD1L1Q86WI1 4243 aa12.94□□□□□ -0.34
LINC01960-201ENST00000563759 Q8N1X5 172 aa12.94□□□□□ -0.34
LINC01960-201ENST00000563759 Q6Q795 121 aa12.93□□□□□ -0.34
LINC01960-201ENST00000563759 SSBP3-AS1Q7Z2R9 100 aa12.93□□□□□ -0.34
LINC01960-201ENST00000563759 HRCT1Q6UXD1 115 aa12.92□□□□□ -0.34
LINC01960-201ENST00000563759 A0A087WSZ3 146 aa12.91□□□□□ -0.34
LINC01960-201ENST00000563759 KRTAP17-1Q9BYP8 105 aa12.89□□□□□ -0.35
LINC01960-201ENST00000563759 Q6ZVQ6 151 aa12.89□□□□□ -0.35
LINC01960-201ENST00000563759 TYMSOSQ8TAI1 123 aa12.89□□□□□ -0.35
LINC01960-201ENST00000563759 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
LINC01960-201ENST00000563759 TRBV7-7A0A0K0K1E9 115 aa12.87□□□□□ -0.35
LINC01960-201ENST00000563759 NREPQ16612 68 aa12.87□□□□□ -0.35
LINC01960-201ENST00000563759 LINC00643Q86TS7 51 aa12.86□□□□□ -0.35
LINC01960-201ENST00000563759 CD164Q04900 197 aa12.82□□□□□ -0.36
LINC01960-201ENST00000563759 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
LINC01960-201ENST00000563759 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
LINC01960-201ENST00000563759 ATP5EP2Q5VTU8 51 aa12.77□□□□□ -0.37
LINC01960-201ENST00000563759 IGKV3D-7A0A0C4DH55 119 aa12.76□□□□□ -0.37
LINC01960-201ENST00000563759 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
LINC01960-201ENST00000563759 BIRC6Q9NR09 4857 aa12.76□□□□□ -0.37
LINC01960-201ENST00000563759 FLG2Q5D862 2391 aaPredicted RBP12.75□□□□□ -0.37
LINC01960-201ENST00000563759 LINC00304Q8N9R0 145 aa12.74□□□□□ -0.37
LINC01960-201ENST00000563759 BPY2O14599 106 aa12.73□□□□□ -0.37
LINC01960-201ENST00000563759 CXCL6P80162 114 aa12.71□□□□□ -0.37
LINC01960-201ENST00000563759 DEFB116Q30KQ4 102 aa12.69□□□□□ -0.38
LINC01960-201ENST00000563759 SPINK1P00995 79 aa12.68□□□□□ -0.38
LINC01960-201ENST00000563759 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
LINC01960-201ENST00000563759 SPAG11AQ6PDA7 123 aa12.67□□□□□ -0.38
LINC01960-201ENST00000563759 LRP1Q07954 4544 aaKnown RBP12.66□□□□□ -0.38
LINC01960-201ENST00000563759 LINC00472Q9H8W2 130 aa12.66□□□□□ -0.38
LINC01960-201ENST00000563759 HIST1H4AP62805 103 aaKnown RBP12.64□□□□□ -0.39
LINC01960-201ENST00000563759 Q96NJ1 140 aa12.63□□□□□ -0.39
LINC01960-201ENST00000563759 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
LINC01960-201ENST00000563759 Q5XG85 94 aa12.63□□□□□ -0.39
LINC01960-201ENST00000563759 IMUPQ9GZP8 106 aa12.62□□□□□ -0.39
LINC01960-201ENST00000563759 ANAPC13Q9BS18 74 aa12.61□□□□□ -0.39
LINC01960-201ENST00000563759 Q8N9L7 120 aa12.61□□□□□ -0.39
LINC01960-201ENST00000563759 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
LINC01960-201ENST00000563759 J3KT08 172 aa12.6□□□□□ -0.39
LINC01960-201ENST00000563759 IGKV4-1P06312 121 aa12.6□□□□□ -0.39
LINC01960-201ENST00000563759 RPS29P62273 56 aaKnown RBP12.6□□□□□ -0.39
LINC01960-201ENST00000563759 ASB16-AS1Q495Z4 193 aa12.6□□□□□ -0.39
LINC01960-201ENST00000563759 MYCBP2O75592 4640 aa12.6□□□□□ -0.39
LINC01960-201ENST00000563759 DSCR10P59022 87 aa12.59□□□□□ -0.39
LINC01960-201ENST00000563759 KRTAP10-8P60410 259 aa12.59□□□□□ -0.39
LINC01960-201ENST00000563759 TNXBP22105 4242 aa12.59□□□□□ -0.39
LINC01960-201ENST00000563759 A0A087WVE0 104 aa12.55□□□□□ -0.4
LINC01960-201ENST00000563759 K7EQZ3 153 aa12.55□□□□□ -0.4
LINC01960-201ENST00000563759 HERC2O95714 4834 aa12.55□□□□□ -0.4
LINC01960-201ENST00000563759 A8MWP4 228 aa12.53□□□□□ -0.4
LINC01960-201ENST00000563759 C1orf195Q5TG92 126 aa12.52□□□□□ -0.41
LINC01960-201ENST00000563759 NDUFB1O75438 58 aa12.51□□□□□ -0.41
LINC01960-201ENST00000563759 OXTP01178 125 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 993.8 ms