RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
TCF4-218ENST00000563686 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
TCF4-218ENST00000563686 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
TCF4-218ENST00000563686 FRYLO94915 3013 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 DCHS1Q96JQ0 3298 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 DMXL1Q9Y485 3027 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 HIVEP3Q5T1R4 2406 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 DMAC1Q96GE9 116 aa3.38□□□□□ -1.87
TCF4-218ENST00000563686 Q8N1X5 172 aa3.37□□□□□ -1.87
TCF4-218ENST00000563686 SPG11Q96JI7 2443 aa3.36□□□□□ -1.87
TCF4-218ENST00000563686 PKD1L2Q7Z442 2459 aa3.36□□□□□ -1.87
TCF4-218ENST00000563686 PRR26Q8N8Z3 221 aa3.36□□□□□ -1.87
TCF4-218ENST00000563686 FRYQ5TBA9 3013 aa3.36□□□□□ -1.87
TCF4-218ENST00000563686 ANKRD11Q6UB99 2663 aaPredicted RBP3.35□□□□□ -1.87
TCF4-218ENST00000563686 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
TCF4-218ENST00000563686 SPINK7P58062 85 aa3.35□□□□□ -1.87
TCF4-218ENST00000563686 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
TCF4-218ENST00000563686 KRTAP10-2P60368 255 aa3.35□□□□□ -1.87
TCF4-218ENST00000563686 ANKRD17O75179 2603 aaKnown RBP3.35□□□□□ -1.87
TCF4-218ENST00000563686 SMR3BP02814 79 aaPredicted RBP3.35□□□□□ -1.87
TCF4-218ENST00000563686 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
TCF4-218ENST00000563686 ZNF292O60281 2723 aa3.34□□□□□ -1.87
TCF4-218ENST00000563686 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
TCF4-218ENST00000563686 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
TCF4-218ENST00000563686 CSMD1Q96PZ7 3565 aa3.33□□□□□ -1.88
TCF4-218ENST00000563686 HRNRQ86YZ3 2850 aaPredicted RBP3.33□□□□□ -1.88
TCF4-218ENST00000563686 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
TCF4-218ENST00000563686 VPS13CQ709C8 3753 aa3.33□□□□□ -1.88
TCF4-218ENST00000563686 RBM12B-AS1Q9P1G2 102 aa3.32□□□□□ -1.88
TCF4-218ENST00000563686 USP24Q9UPU5 2620 aa3.32□□□□□ -1.88
TCF4-218ENST00000563686 LAMA5O15230 3695 aa3.32□□□□□ -1.88
TCF4-218ENST00000563686 FASNP49327 2511 aaKnown RBP3.31□□□□□ -1.88
TCF4-218ENST00000563686 DOPEY1Q5JWR5 2465 aa3.31□□□□□ -1.88
TCF4-218ENST00000563686 NAV2Q8IVL1 2488 aa3.31□□□□□ -1.88
TCF4-218ENST00000563686 CEP295Q9C0D2 2601 aa3.31□□□□□ -1.88
TCF4-218ENST00000563686 SORL1Q92673 2214 aa3.31□□□□□ -1.88
TCF4-218ENST00000563686 LRBAP50851 2863 aa3.31□□□□□ -1.88
TCF4-218ENST00000563686 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
TCF4-218ENST00000563686 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
TCF4-218ENST00000563686 SONP18583 2426 aaKnown RBP3.3□□□□□ -1.88
TCF4-218ENST00000563686 MYO18BQ8IUG5 2567 aa3.3□□□□□ -1.88
TCF4-218ENST00000563686 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
TCF4-218ENST00000563686 CCDC168Q8NDH2 2452 aa3.29□□□□□ -1.88
TCF4-218ENST00000563686 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
TCF4-218ENST00000563686 WNK1Q9H4A3 2382 aa3.29□□□□□ -1.88
TCF4-218ENST00000563686 ANK2Q01484 3957 aa3.28□□□□□ -1.88
TCF4-218ENST00000563686 MGAQ8IWI9 3026 aa3.28□□□□□ -1.88
TCF4-218ENST00000563686 CSPG4Q6UVK1 2322 aa3.28□□□□□ -1.88
TCF4-218ENST00000563686 A6NN06 94 aa3.28□□□□□ -1.88
TCF4-218ENST00000563686 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
TCF4-218ENST00000563686 TLN1Q9Y490 2541 aaKnown RBP3.27□□□□□ -1.89
TCF4-218ENST00000563686 KRTAP13-2Q52LG2 175 aa3.27□□□□□ -1.89
TCF4-218ENST00000563686 A0A1B0GU33 70 aa3.27□□□□□ -1.89
TCF4-218ENST00000563686 C2CD3Q4AC94 2353 aa3.26□□□□□ -1.89
TCF4-218ENST00000563686 DMXL2Q8TDJ6 3036 aa3.26□□□□□ -1.89
TCF4-218ENST00000563686 S4R3F8 94 aa3.26□□□□□ -1.89
TCF4-218ENST00000563686 ALMS1Q8TCU4 4167 aa3.26□□□□□ -1.89
TCF4-218ENST00000563686 LRRK2Q5S007 2527 aa3.26□□□□□ -1.89
TCF4-218ENST00000563686 M0R2T5 61 aa3.25□□□□□ -1.89
TCF4-218ENST00000563686 NBPF19A0A087WUL8 3843 aa3.25□□□□□ -1.89
TCF4-218ENST00000563686 LOC400499M0QZD8 3231 aa3.25□□□□□ -1.89
TCF4-218ENST00000563686 H3BS24 57 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 KRTAP21-3Q3LHN1 58 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 SVEP1Q4LDE5 3571 aa3.24□□□□□ -1.89
TCF4-218ENST00000563686 NOTCH3Q9UM47 2321 aa3.23□□□□□ -1.89
TCF4-218ENST00000563686 EPG5Q9HCE0 2579 aa3.23□□□□□ -1.89
TCF4-218ENST00000563686 IGSF10Q6WRI0 2623 aa3.23□□□□□ -1.89
TCF4-218ENST00000563686 DSPP15924 2871 aaKnown RBP3.23□□□□□ -1.89
TCF4-218ENST00000563686 KALRNO60229 2985 aa3.23□□□□□ -1.89
TCF4-218ENST00000563686 KMT2BQ9UMN6 2715 aaPredicted RBP3.23□□□□□ -1.89
TCF4-218ENST00000563686 CFAP47Q6ZTR5 3102 aa3.22□□□□□ -1.89
TCF4-218ENST00000563686 A0A0D9SG42 100 aa3.22□□□□□ -1.89
TCF4-218ENST00000563686 BOD1L1Q8NFC6 3051 aa3.21□□□□□ -1.9
TCF4-218ENST00000563686 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
TCF4-218ENST00000563686 ATMQ13315 3056 aa3.2□□□□□ -1.9
TCF4-218ENST00000563686 ABCA12Q86UK0 2595 aa3.2□□□□□ -1.9
TCF4-218ENST00000563686 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
TCF4-218ENST00000563686 JMJD1CQ15652 2540 aa3.2□□□□□ -1.9
TCF4-218ENST00000563686 A8MU10 97 aa3.2□□□□□ -1.9
TCF4-218ENST00000563686 DYNC2H1Q8NCM8 4307 aaKnown RBP3.19□□□□□ -1.9
TCF4-218ENST00000563686 Q5VSD8 79 aa3.19□□□□□ -1.9
TCF4-218ENST00000563686 ZFYVE26Q68DK2 2539 aa3.19□□□□□ -1.9
TCF4-218ENST00000563686 Q6ZSA8 131 aa3.19□□□□□ -1.9
TCF4-218ENST00000563686 HECTD1Q9ULT8 2610 aa3.18□□□□□ -1.9
TCF4-218ENST00000563686 SEC61BP60468 96 aaKnown RBP3.18□□□□□ -1.9
TCF4-218ENST00000563686 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
TCF4-218ENST00000563686 RELNP78509 3460 aa3.18□□□□□ -1.9
TCF4-218ENST00000563686 FLNBO75369 2602 aaKnown RBP3.18□□□□□ -1.9
TCF4-218ENST00000563686 F8P00451 2351 aa3.17□□□□□ -1.9
TCF4-218ENST00000563686 KRTAP1-4P0C5Y4 121 aa3.17□□□□□ -1.9
TCF4-218ENST00000563686 ROMO1P60602 79 aa3.16□□□□□ -1.9
TCF4-218ENST00000563686 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
TCF4-218ENST00000563686 CUBNO60494 3623 aa3.16□□□□□ -1.9
TCF4-218ENST00000563686 ADGRG4Q8IZF6 3080 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms