RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 KRTAP19-2Q3LHN2 52 aa9.24□□□□□ -0.93
HDGFL3-203ENST00000563404 SMIM11BQ8TCY0 68 aa9.24□□□□□ -0.93
HDGFL3-203ENST00000563404 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
HDGFL3-203ENST00000563404 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
HDGFL3-203ENST00000563404 VAMP3Q15836 100 aa9.22□□□□□ -0.93
HDGFL3-203ENST00000563404 C6orf99Q4VX62 202 aa9.22□□□□□ -0.93
HDGFL3-203ENST00000563404 NHP2Q9NX24 153 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-203ENST00000563404 CRCT1Q9UGL9 99 aa9.22□□□□□ -0.93
HDGFL3-203ENST00000563404 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-203ENST00000563404 COX7BP24311 80 aa9.19□□□□□ -0.94
HDGFL3-203ENST00000563404 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
HDGFL3-203ENST00000563404 H0YGX0 51 aa9.16□□□□□ -0.94
HDGFL3-203ENST00000563404 MT1HP80294 61 aa9.16□□□□□ -0.94
HDGFL3-203ENST00000563404 H7C2G1 150 aa9.14□□□□□ -0.95
HDGFL3-203ENST00000563404 Q1RN00 199 aa9.14□□□□□ -0.95
HDGFL3-203ENST00000563404 PCOTHQ58A44 107 aa9.14□□□□□ -0.95
HDGFL3-203ENST00000563404 HRCT1Q6UXD1 115 aa9.14□□□□□ -0.95
HDGFL3-203ENST00000563404 K7ERJ3 54 aa9.13□□□□□ -0.95
HDGFL3-203ENST00000563404 SPRR1BP22528 89 aa9.13□□□□□ -0.95
HDGFL3-203ENST00000563404 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
HDGFL3-203ENST00000563404 COX6CP09669 75 aa9.12□□□□□ -0.95
HDGFL3-203ENST00000563404 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
HDGFL3-203ENST00000563404 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
HDGFL3-203ENST00000563404 A0A1B0GX51 115 aa9.11□□□□□ -0.95
HDGFL3-203ENST00000563404 SNCGO76070 127 aa9.11□□□□□ -0.95
HDGFL3-203ENST00000563404 TRIAP1O43715 76 aa9.09□□□□□ -0.95
HDGFL3-203ENST00000563404 PSMB2P49721 201 aa9.08□□□□□ -0.96
HDGFL3-203ENST00000563404 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
HDGFL3-203ENST00000563404 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
HDGFL3-203ENST00000563404 BATFQ16520 125 aa9.07□□□□□ -0.96
HDGFL3-203ENST00000563404 SNHG12Q9BXW3 62 aa9.07□□□□□ -0.96
HDGFL3-203ENST00000563404 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-203ENST00000563404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-203ENST00000563404 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
HDGFL3-203ENST00000563404 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
HDGFL3-203ENST00000563404 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-203ENST00000563404 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
HDGFL3-203ENST00000563404 GHRHP01286 108 aa9.03□□□□□ -0.96
HDGFL3-203ENST00000563404 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
HDGFL3-203ENST00000563404 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
HDGFL3-203ENST00000563404 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
HDGFL3-203ENST00000563404 TEX49A0A1B0GTD5 131 aa9.02□□□□□ -0.97
HDGFL3-203ENST00000563404 C9orf118A6NHY6 69 aa9.02□□□□□ -0.97
HDGFL3-203ENST00000563404 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-203ENST00000563404 PPDPFLQ8WWR9 84 aa9.02□□□□□ -0.97
HDGFL3-203ENST00000563404 TAX1BP3O14907 124 aa9.01□□□□□ -0.97
HDGFL3-203ENST00000563404 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
HDGFL3-203ENST00000563404 FAM218AQ96MZ4 157 aa9.01□□□□□ -0.97
HDGFL3-203ENST00000563404 H3BQ85 93 aa9□□□□□ -0.97
HDGFL3-203ENST00000563404 CD164Q04900 197 aa9□□□□□ -0.97
HDGFL3-203ENST00000563404 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
HDGFL3-203ENST00000563404 TRACP01848 142 aa8.99□□□□□ -0.97
HDGFL3-203ENST00000563404 Q6ZQY7 126 aa8.99□□□□□ -0.97
HDGFL3-203ENST00000563404 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
HDGFL3-203ENST00000563404 TRBV20-1A0A075B6N2 111 aa8.98□□□□□ -0.97
HDGFL3-203ENST00000563404 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
HDGFL3-203ENST00000563404 LST1O00453 97 aa8.98□□□□□ -0.97
HDGFL3-203ENST00000563404 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
HDGFL3-203ENST00000563404 C1orf195Q5TG92 126 aa8.97□□□□□ -0.97
HDGFL3-203ENST00000563404 H3BUT2 72 aa8.96□□□□□ -0.98
HDGFL3-203ENST00000563404 Q5XG85 94 aa8.96□□□□□ -0.98
HDGFL3-203ENST00000563404 DNAL4O96015 105 aa8.95□□□□□ -0.98
HDGFL3-203ENST00000563404 A0A1W2PPM0 123 aa8.94□□□□□ -0.98
HDGFL3-203ENST00000563404 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
HDGFL3-203ENST00000563404 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
HDGFL3-203ENST00000563404 FABP2P12104 132 aa8.93□□□□□ -0.98
HDGFL3-203ENST00000563404 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-203ENST00000563404 TCL1BO95988 128 aa8.92□□□□□ -0.98
HDGFL3-203ENST00000563404 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
HDGFL3-203ENST00000563404 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
HDGFL3-203ENST00000563404 M0R2T5 61 aa8.9□□□□□ -0.98
HDGFL3-203ENST00000563404 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
HDGFL3-203ENST00000563404 F8WEM9 126 aa8.86□□□□□ -0.99
HDGFL3-203ENST00000563404 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
HDGFL3-203ENST00000563404 NDUFV3P56181 108 aaKnown RBP8.85□□□□□ -0.99
HDGFL3-203ENST00000563404 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
HDGFL3-203ENST00000563404 Q6JHZ5 121 aa8.84□□□□□ -0.99
HDGFL3-203ENST00000563404 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
HDGFL3-203ENST00000563404 H3BMG7 143 aa8.8□□□□□ -1
HDGFL3-203ENST00000563404 C9JAW5 83 aa8.79□□□□□ -1
HDGFL3-203ENST00000563404 K7EP34 96 aa8.79□□□□□ -1
HDGFL3-203ENST00000563404 H3BT86 120 aa8.78□□□□□ -1
HDGFL3-203ENST00000563404 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
HDGFL3-203ENST00000563404 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
HDGFL3-203ENST00000563404 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
HDGFL3-203ENST00000563404 USH2AO75445 5202 aa8.75□□□□□ -1.01
HDGFL3-203ENST00000563404 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
HDGFL3-203ENST00000563404 Q6Q795 121 aa8.74□□□□□ -1.01
HDGFL3-203ENST00000563404 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
HDGFL3-203ENST00000563404 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
HDGFL3-203ENST00000563404 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
HDGFL3-203ENST00000563404 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.02
HDGFL3-203ENST00000563404 PDE6GP18545 87 aa8.71□□□□□ -1.02
HDGFL3-203ENST00000563404 C21orf62-AS1Q17RA5 79 aa8.71□□□□□ -1.02
HDGFL3-203ENST00000563404 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
HDGFL3-203ENST00000563404 Q75L30 129 aa8.7□□□□□ -1.02
HDGFL3-203ENST00000563404 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
HDGFL3-203ENST00000563404 DSCR8Q96T75 97 aa8.7□□□□□ -1.02
HDGFL3-203ENST00000563404 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
HDGFL3-203ENST00000563404 F8W1H4 67 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms