RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 Q1RN00 199 aa4.85□□□□□ -1.63
UBR1-204ENST00000563239 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
UBR1-204ENST00000563239 RAB37Q96AX2 223 aa4.85□□□□□ -1.63
UBR1-204ENST00000563239 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
UBR1-204ENST00000563239 LAMTOR3Q9UHA4 124 aa4.85□□□□□ -1.63
UBR1-204ENST00000563239 hADV29S1A0JD25 119 aa4.84□□□□□ -1.63
UBR1-204ENST00000563239 HSD52Q0P140 79 aa4.84□□□□□ -1.63
UBR1-204ENST00000563239 UQCR10Q9UDW1 63 aa4.84□□□□□ -1.63
UBR1-204ENST00000563239 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
UBR1-204ENST00000563239 SLC25A20O43772 301 aa4.83□□□□□ -1.64
UBR1-204ENST00000563239 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
UBR1-204ENST00000563239 BVES-AS1Q5T3Y7 98 aa4.83□□□□□ -1.64
UBR1-204ENST00000563239 Q6ZQY7 126 aa4.83□□□□□ -1.64
UBR1-204ENST00000563239 FAM218AQ96MZ4 157 aa4.83□□□□□ -1.64
UBR1-204ENST00000563239 PRO1854Q9UHT4 67 aa4.83□□□□□ -1.64
UBR1-204ENST00000563239 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
UBR1-204ENST00000563239 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
UBR1-204ENST00000563239 LOC105371267A0A1B0GV96 52 aa4.81□□□□□ -1.64
UBR1-204ENST00000563239 K7ERJ3 54 aa4.81□□□□□ -1.64
UBR1-204ENST00000563239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.81□□□□□ -1.64
UBR1-204ENST00000563239 PRO1933Q9H354 126 aa4.81□□□□□ -1.64
UBR1-204ENST00000563239 H0YGX0 51 aa4.8□□□□□ -1.64
UBR1-204ENST00000563239 TRIAP1O43715 76 aa4.8□□□□□ -1.64
UBR1-204ENST00000563239 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
UBR1-204ENST00000563239 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
UBR1-204ENST00000563239 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
UBR1-204ENST00000563239 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
UBR1-204ENST00000563239 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
UBR1-204ENST00000563239 CD164Q04900 197 aa4.79□□□□□ -1.64
UBR1-204ENST00000563239 MUC17Q685J3 4493 aa4.78□□□□□ -1.64
UBR1-204ENST00000563239 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
UBR1-204ENST00000563239 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
UBR1-204ENST00000563239 A0A1B0GX51 115 aa4.76□□□□□ -1.65
UBR1-204ENST00000563239 OCIAD2Q56VL3 154 aa4.76□□□□□ -1.65
UBR1-204ENST00000563239 Q5XG85 94 aa4.76□□□□□ -1.65
UBR1-204ENST00000563239 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
UBR1-204ENST00000563239 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
UBR1-204ENST00000563239 LIMD2Q9BT23 127 aa4.75□□□□□ -1.65
UBR1-204ENST00000563239 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
UBR1-204ENST00000563239 F8WEM9 126 aa4.74□□□□□ -1.65
UBR1-204ENST00000563239 H3BUT2 72 aa4.74□□□□□ -1.65
UBR1-204ENST00000563239 PSMB2P49721 201 aa4.73□□□□□ -1.65
UBR1-204ENST00000563239 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
UBR1-204ENST00000563239 Q6JHZ5 121 aa4.73□□□□□ -1.65
UBR1-204ENST00000563239 SNHG12Q9BXW3 62 aa4.73□□□□□ -1.65
UBR1-204ENST00000563239 SNCGO76070 127 aa4.72□□□□□ -1.65
UBR1-204ENST00000563239 NDUFV3P56181 108 aaKnown RBP4.72□□□□□ -1.65
UBR1-204ENST00000563239 TRBV7-7A0A0K0K1E9 115 aa4.71□□□□□ -1.66
UBR1-204ENST00000563239 M0R143 59 aa4.7□□□□□ -1.66
UBR1-204ENST00000563239 COX6CP09669 75 aa4.7□□□□□ -1.66
UBR1-204ENST00000563239 TSTD3H0UI37 97 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 H3BMG7 143 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 LST1O00453 97 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 TRACP01848 142 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 FABP2P12104 132 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 XP32Q5T750 250 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 Q6Q795 121 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
UBR1-204ENST00000563239 TCL1BO95988 128 aa4.68□□□□□ -1.66
UBR1-204ENST00000563239 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
UBR1-204ENST00000563239 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
UBR1-204ENST00000563239 DNAL4O96015 105 aa4.67□□□□□ -1.66
UBR1-204ENST00000563239 SCGB1C2P0DMR2 95 aa4.67□□□□□ -1.66
UBR1-204ENST00000563239 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
UBR1-204ENST00000563239 H3BQ85 93 aa4.66□□□□□ -1.66
UBR1-204ENST00000563239 TMEM256-PLSCR3K7ERE1 68 aa4.66□□□□□ -1.66
UBR1-204ENST00000563239 TEN1Q86WV5 123 aa4.66□□□□□ -1.66
UBR1-204ENST00000563239 UBE2V1Q13404 147 aa4.65□□□□□ -1.67
UBR1-204ENST00000563239 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.67
UBR1-204ENST00000563239 A0A1B0GV72 72 aa4.64□□□□□ -1.67
UBR1-204ENST00000563239 BATFQ16520 125 aa4.64□□□□□ -1.67
UBR1-204ENST00000563239 A0A087WSZ3 146 aa4.63□□□□□ -1.67
UBR1-204ENST00000563239 BAALC-AS2P0C853 105 aa4.63□□□□□ -1.67
UBR1-204ENST00000563239 ANKRD29Q8N6D5 301 aa4.63□□□□□ -1.67
UBR1-204ENST00000563239 Q96NJ1 140 aa4.63□□□□□ -1.67
UBR1-204ENST00000563239 C9orf118A6NHY6 69 aa4.62□□□□□ -1.67
UBR1-204ENST00000563239 TAX1BP3O14907 124 aa4.62□□□□□ -1.67
UBR1-204ENST00000563239 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
UBR1-204ENST00000563239 ATXN8Q156A1 80 aa4.62□□□□□ -1.67
UBR1-204ENST00000563239 TRBV7-4A0A0J9YYF1 115 aa4.61□□□□□ -1.67
UBR1-204ENST00000563239 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
UBR1-204ENST00000563239 SS18L2Q9UHA2 77 aa4.6□□□□□ -1.67
UBR1-204ENST00000563239 CCKP06307 115 aa4.59□□□□□ -1.67
UBR1-204ENST00000563239 RBM3P98179 157 aaKnown RBP4.59□□□□□ -1.67
UBR1-204ENST00000563239 PCOTHQ58A44 107 aa4.59□□□□□ -1.67
UBR1-204ENST00000563239 TRBV20-1A0A075B6N2 111 aa4.58□□□□□ -1.68
UBR1-204ENST00000563239 A0A1W2PPM0 123 aa4.58□□□□□ -1.68
UBR1-204ENST00000563239 RPL37P61927 97 aaKnown RBP4.57□□□□□ -1.68
UBR1-204ENST00000563239 OBSCN-AS1Q96MR7 158 aa4.57□□□□□ -1.68
UBR1-204ENST00000563239 LINC00472Q9H8W2 130 aa4.57□□□□□ -1.68
UBR1-204ENST00000563239 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
UBR1-204ENST00000563239 C9JAW5 83 aa4.56□□□□□ -1.68
UBR1-204ENST00000563239 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
UBR1-204ENST00000563239 DSCR8Q96T75 97 aa4.56□□□□□ -1.68
UBR1-204ENST00000563239 Q6ZQT0 140 aa4.55□□□□□ -1.68
UBR1-204ENST00000563239 LOC110117498A0A087WWA1 95 aa4.54□□□□□ -1.68
UBR1-204ENST00000563239 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
UBR1-204ENST00000563239 DEFB116Q30KQ4 102 aa4.54□□□□□ -1.68
UBR1-204ENST00000563239 VPS25Q9BRG1 176 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms