RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
TSPAN3-210ENST00000561277 A0A0G2JQZ4 141 aa11.23□□□□□ -0.61
TSPAN3-210ENST00000561277 F8WEM9 126 aa11.22□□□□□ -0.61
TSPAN3-210ENST00000561277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.22□□□□□ -0.61
TSPAN3-210ENST00000561277 LIMD2Q9BT23 127 aa11.2□□□□□ -0.62
TSPAN3-210ENST00000561277 H0YGX0 51 aa11.2□□□□□ -0.62
TSPAN3-210ENST00000561277 K7ERJ3 54 aa11.2□□□□□ -0.62
TSPAN3-210ENST00000561277 FAM218AQ96MZ4 157 aa11.19□□□□□ -0.62
TSPAN3-210ENST00000561277 CD164Q04900 197 aa11.18□□□□□ -0.62
TSPAN3-210ENST00000561277 TRIAP1O43715 76 aa11.17□□□□□ -0.62
TSPAN3-210ENST00000561277 SNCGO76070 127 aa11.16□□□□□ -0.62
TSPAN3-210ENST00000561277 KRTAP13-3Q3SY46 172 aa11.15□□□□□ -0.62
TSPAN3-210ENST00000561277 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
TSPAN3-210ENST00000561277 SNHG12Q9BXW3 62 aa11.14□□□□□ -0.63
TSPAN3-210ENST00000561277 PSMB2P49721 201 aa11.12□□□□□ -0.63
TSPAN3-210ENST00000561277 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
TSPAN3-210ENST00000561277 OCIAD2Q56VL3 154 aa11.11□□□□□ -0.63
TSPAN3-210ENST00000561277 CLEC2BQ92478 149 aa11.1□□□□□ -0.63
TSPAN3-210ENST00000561277 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
TSPAN3-210ENST00000561277 A0A1B0GX51 115 aa11.09□□□□□ -0.63
TSPAN3-210ENST00000561277 Q6JHZ5 121 aa11.09□□□□□ -0.63
TSPAN3-210ENST00000561277 IGFL1Q6UW32 110 aa11.09□□□□□ -0.63
TSPAN3-210ENST00000561277 H3BUT2 72 aa11.08□□□□□ -0.64
TSPAN3-210ENST00000561277 MUC2Q02817 5179 aa11.08□□□□□ -0.64
TSPAN3-210ENST00000561277 Q5XG85 94 aa11.07□□□□□ -0.64
TSPAN3-210ENST00000561277 COX6CP09669 75 aa11.05□□□□□ -0.64
TSPAN3-210ENST00000561277 DNAL4O96015 105 aa11.03□□□□□ -0.64
TSPAN3-210ENST00000561277 FABP2P12104 132 aa11.03□□□□□ -0.64
TSPAN3-210ENST00000561277 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
TSPAN3-210ENST00000561277 TCL1BO95988 128 aa11.02□□□□□ -0.65
TSPAN3-210ENST00000561277 GHRHP01286 108 aa11.02□□□□□ -0.65
TSPAN3-210ENST00000561277 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
TSPAN3-210ENST00000561277 TRBV7-7A0A0K0K1E9 115 aa11□□□□□ -0.65
TSPAN3-210ENST00000561277 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
TSPAN3-210ENST00000561277 LOC105371267A0A1B0GV96 52 aa10.99□□□□□ -0.65
TSPAN3-210ENST00000561277 M0R143 59 aa10.99□□□□□ -0.65
TSPAN3-210ENST00000561277 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
TSPAN3-210ENST00000561277 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
TSPAN3-210ENST00000561277 H3BMG7 143 aa10.97□□□□□ -0.65
TSPAN3-210ENST00000561277 SCGB1C2P0DMR2 95 aa10.97□□□□□ -0.65
TSPAN3-210ENST00000561277 XP32Q5T750 250 aa10.96□□□□□ -0.65
TSPAN3-210ENST00000561277 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
TSPAN3-210ENST00000561277 A0A1B0GV72 72 aa10.94□□□□□ -0.66
TSPAN3-210ENST00000561277 LST1O00453 97 aa10.91□□□□□ -0.66
TSPAN3-210ENST00000561277 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
TSPAN3-210ENST00000561277 H3BQ85 93 aa10.9□□□□□ -0.66
TSPAN3-210ENST00000561277 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
TSPAN3-210ENST00000561277 SEC61BP60468 96 aaKnown RBP10.9□□□□□ -0.66
TSPAN3-210ENST00000561277 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
TSPAN3-210ENST00000561277 TRACP01848 142 aa10.9□□□□□ -0.67
TSPAN3-210ENST00000561277 Q6Q795 121 aa10.9□□□□□ -0.67
TSPAN3-210ENST00000561277 TEN1Q86WV5 123 aa10.9□□□□□ -0.67
TSPAN3-210ENST00000561277 BATFQ16520 125 aa10.86□□□□□ -0.67
TSPAN3-210ENST00000561277 A0A087WSZ3 146 aa10.86□□□□□ -0.67
TSPAN3-210ENST00000561277 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
TSPAN3-210ENST00000561277 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
TSPAN3-210ENST00000561277 ANKRD29Q8N6D5 301 aa10.84□□□□□ -0.67
TSPAN3-210ENST00000561277 A0A1W2PNM2 257 aa10.83□□□□□ -0.68
TSPAN3-210ENST00000561277 UBE2V1Q13404 147 aa10.83□□□□□ -0.68
TSPAN3-210ENST00000561277 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
TSPAN3-210ENST00000561277 KRTAP4-1Q9BYQ7 146 aa10.78□□□□□ -0.68
TSPAN3-210ENST00000561277 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.68
TSPAN3-210ENST00000561277 PCOTHQ58A44 107 aa10.77□□□□□ -0.69
TSPAN3-210ENST00000561277 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
TSPAN3-210ENST00000561277 CCKP06307 115 aa10.76□□□□□ -0.69
TSPAN3-210ENST00000561277 FAT4Q6V0I7 4981 aa10.75□□□□□ -0.69
TSPAN3-210ENST00000561277 RBM3P98179 157 aaKnown RBP10.74□□□□□ -0.69
TSPAN3-210ENST00000561277 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
TSPAN3-210ENST00000561277 VPS25Q9BRG1 176 aa10.73□□□□□ -0.69
TSPAN3-210ENST00000561277 OBSCN-AS1Q96MR7 158 aa10.73□□□□□ -0.69
TSPAN3-210ENST00000561277 Q96NJ1 140 aa10.73□□□□□ -0.69
TSPAN3-210ENST00000561277 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
TSPAN3-210ENST00000561277 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
TSPAN3-210ENST00000561277 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
TSPAN3-210ENST00000561277 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
TSPAN3-210ENST00000561277 C9orf118A6NHY6 69 aa10.66□□□□□ -0.7
TSPAN3-210ENST00000561277 TAX1BP3O14907 124 aa10.66□□□□□ -0.7
TSPAN3-210ENST00000561277 C9JAW5 83 aa10.65□□□□□ -0.7
TSPAN3-210ENST00000561277 IGKV4-1P06312 121 aa10.64□□□□□ -0.71
TSPAN3-210ENST00000561277 DEFB116Q30KQ4 102 aa10.63□□□□□ -0.71
TSPAN3-210ENST00000561277 A0A1W2PPM0 123 aa10.62□□□□□ -0.71
TSPAN3-210ENST00000561277 JMJD7-PLA2G4BH0Y9G9 81 aa10.62□□□□□ -0.71
TSPAN3-210ENST00000561277 DSCR10P59022 87 aa10.6□□□□□ -0.71
TSPAN3-210ENST00000561277 LINC00472Q9H8W2 130 aa10.6□□□□□ -0.71
TSPAN3-210ENST00000561277 LCE2AQ5TA79 106 aaPredicted RBP10.58□□□□□ -0.72
TSPAN3-210ENST00000561277 Q75L30 129 aa10.58□□□□□ -0.72
TSPAN3-210ENST00000561277 Q6ZQT0 140 aa10.57□□□□□ -0.72
TSPAN3-210ENST00000561277 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
TSPAN3-210ENST00000561277 C14orf132Q9NPU4 83 aa10.57□□□□□ -0.72
TSPAN3-210ENST00000561277 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
TSPAN3-210ENST00000561277 ATP11AUNQ6ZP68 121 aa10.55□□□□□ -0.72
TSPAN3-210ENST00000561277 LINC00313P59037 77 aa10.52□□□□□ -0.72
TSPAN3-210ENST00000561277 C21orf62-AS1Q17RA5 79 aa10.52□□□□□ -0.72
TSPAN3-210ENST00000561277 C20orf166-AS1Q96NR2 134 aa10.52□□□□□ -0.72
TSPAN3-210ENST00000561277 H3BT86 120 aa10.52□□□□□ -0.73
TSPAN3-210ENST00000561277 PDE6GP18545 87 aa10.52□□□□□ -0.73
TSPAN3-210ENST00000561277 IGHV6-1A0A0B4J1U7 121 aa10.51□□□□□ -0.73
TSPAN3-210ENST00000561277 COL5A1-AS1Q5SY13 56 aa10.5□□□□□ -0.73
TSPAN3-210ENST00000561277 SPCS1Q9Y6A9 102 aa10.5□□□□□ -0.73
TSPAN3-210ENST00000561277 A8MUU9 505 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms