RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
TRAF3-208ENST00000560371 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
TRAF3-208ENST00000560371 CASC10Q5T4H9 136 aa8.72□□□□□ -1.01
TRAF3-208ENST00000560371 UQCR11O14957 56 aa8.71□□□□□ -1.01
TRAF3-208ENST00000560371 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
TRAF3-208ENST00000560371 COL6A3P12111 3177 aa8.7□□□□□ -1.02
TRAF3-208ENST00000560371 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
TRAF3-208ENST00000560371 COA5Q86WW8 74 aa8.69□□□□□ -1.02
TRAF3-208ENST00000560371 DNAH14Q0VDD8 3507 aa8.69□□□□□ -1.02
TRAF3-208ENST00000560371 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
TRAF3-208ENST00000560371 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
TRAF3-208ENST00000560371 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
TRAF3-208ENST00000560371 VCANP13611 3396 aa8.67□□□□□ -1.02
TRAF3-208ENST00000560371 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
TRAF3-208ENST00000560371 TNP2Q05952 138 aa8.67□□□□□ -1.02
TRAF3-208ENST00000560371 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
TRAF3-208ENST00000560371 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-208ENST00000560371 ITPR1Q14643 2758 aa8.65□□□□□ -1.02
TRAF3-208ENST00000560371 IGLV5-48A0A075B6I7 105 aa8.65□□□□□ -1.02
TRAF3-208ENST00000560371 FLNCQ14315 2725 aa8.65□□□□□ -1.02
TRAF3-208ENST00000560371 TACC2O95359 2948 aa8.65□□□□□ -1.02
TRAF3-208ENST00000560371 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
TRAF3-208ENST00000560371 RPS28P62857 69 aaKnown RBP8.63□□□□□ -1.03
TRAF3-208ENST00000560371 A8MUN3 132 aa8.63□□□□□ -1.03
TRAF3-208ENST00000560371 COL12A1Q99715 3063 aa8.61□□□□□ -1.03
TRAF3-208ENST00000560371 UTP20O75691 2785 aaKnown RBP8.61□□□□□ -1.03
TRAF3-208ENST00000560371 LRBAP50851 2863 aa8.61□□□□□ -1.03
TRAF3-208ENST00000560371 APCP25054 2843 aa8.6□□□□□ -1.03
TRAF3-208ENST00000560371 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
TRAF3-208ENST00000560371 ASH1LQ9NR48 2969 aaKnown RBP8.59□□□□□ -1.03
TRAF3-208ENST00000560371 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
TRAF3-208ENST00000560371 Q8N1X5 172 aa8.58□□□□□ -1.04
TRAF3-208ENST00000560371 WIPF1O43516 503 aa8.56□□□□□ -1.04
TRAF3-208ENST00000560371 ADGRG4Q8IZF6 3080 aa8.55□□□□□ -1.04
TRAF3-208ENST00000560371 ATMQ13315 3056 aa8.54□□□□□ -1.04
TRAF3-208ENST00000560371 ZZEF1O43149 2961 aa8.53□□□□□ -1.04
TRAF3-208ENST00000560371 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
TRAF3-208ENST00000560371 EYSQ5T1H1 3165 aa8.52□□□□□ -1.05
TRAF3-208ENST00000560371 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
TRAF3-208ENST00000560371 SPEGQ15772 3267 aa8.51□□□□□ -1.05
TRAF3-208ENST00000560371 CFAP47Q6ZTR5 3102 aa8.51□□□□□ -1.05
TRAF3-208ENST00000560371 Q6ZSA8 131 aa8.51□□□□□ -1.05
TRAF3-208ENST00000560371 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
TRAF3-208ENST00000560371 NBEAQ8NFP9 2946 aa8.5□□□□□ -1.05
TRAF3-208ENST00000560371 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
TRAF3-208ENST00000560371 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
TRAF3-208ENST00000560371 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
TRAF3-208ENST00000560371 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
TRAF3-208ENST00000560371 CD164Q04900 197 aa8.47□□□□□ -1.05
TRAF3-208ENST00000560371 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
TRAF3-208ENST00000560371 USP34Q70CQ2 3546 aa8.45□□□□□ -1.06
TRAF3-208ENST00000560371 FAM104AQ969W3 186 aa8.44□□□□□ -1.06
TRAF3-208ENST00000560371 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
TRAF3-208ENST00000560371 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
TRAF3-208ENST00000560371 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
TRAF3-208ENST00000560371 H7BZZ5 65 aa8.37□□□□□ -1.07
TRAF3-208ENST00000560371 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
TRAF3-208ENST00000560371 LCA10Q71F78 164 aa8.32□□□□□ -1.08
TRAF3-208ENST00000560371 Q1T7F1 81 aa8.32□□□□□ -1.08
TRAF3-208ENST00000560371 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
TRAF3-208ENST00000560371 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
TRAF3-208ENST00000560371 DMXL1Q9Y485 3027 aa8.28□□□□□ -1.08
TRAF3-208ENST00000560371 DCHS2Q6V1P9 2916 aa8.27□□□□□ -1.09
TRAF3-208ENST00000560371 LCE6AA0A183 80 aa8.27□□□□□ -1.09
TRAF3-208ENST00000560371 Q5VSD8 79 aa8.26□□□□□ -1.09
TRAF3-208ENST00000560371 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
TRAF3-208ENST00000560371 HRES1P13985 223 aa8.26□□□□□ -1.09
TRAF3-208ENST00000560371 KRTAP1-5Q9BYS1 174 aa8.25□□□□□ -1.09
TRAF3-208ENST00000560371 SPRR1AP35321 89 aa8.24□□□□□ -1.09
TRAF3-208ENST00000560371 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
TRAF3-208ENST00000560371 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.09
TRAF3-208ENST00000560371 A0A1B0GU33 70 aa8.24□□□□□ -1.09
TRAF3-208ENST00000560371 S4R3F8 94 aa8.23□□□□□ -1.09
TRAF3-208ENST00000560371 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-208ENST00000560371 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
TRAF3-208ENST00000560371 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.09
TRAF3-208ENST00000560371 NF1P21359 2839 aa8.21□□□□□ -1.1
TRAF3-208ENST00000560371 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
TRAF3-208ENST00000560371 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
TRAF3-208ENST00000560371 Q8NDZ9 215 aa8.19□□□□□ -1.1
TRAF3-208ENST00000560371 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
TRAF3-208ENST00000560371 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
TRAF3-208ENST00000560371 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
TRAF3-208ENST00000560371 R4GN34 69 aa8.17□□□□□ -1.1
TRAF3-208ENST00000560371 LOC400499M0QZD8 3231 aa8.16□□□□□ -1.1
TRAF3-208ENST00000560371 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
TRAF3-208ENST00000560371 SPINK7P58062 85 aa8.14□□□□□ -1.11
TRAF3-208ENST00000560371 SPRR1BP22528 89 aa8.13□□□□□ -1.11
TRAF3-208ENST00000560371 SPTBN5Q9NRC6 3674 aaKnown RBP8.13□□□□□ -1.11
TRAF3-208ENST00000560371 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
TRAF3-208ENST00000560371 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
TRAF3-208ENST00000560371 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
TRAF3-208ENST00000560371 FBN2P35556 2912 aa8.11□□□□□ -1.11
TRAF3-208ENST00000560371 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
TRAF3-208ENST00000560371 Q8N9P0 234 aaPredicted RBP8.1□□□□□ -1.11
TRAF3-208ENST00000560371 MYO15AQ9UKN7 3530 aa8.09□□□□□ -1.12
TRAF3-208ENST00000560371 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
TRAF3-208ENST00000560371 Q5W150 140 aa8.07□□□□□ -1.12
TRAF3-208ENST00000560371 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
TRAF3-208ENST00000560371 Q6ZR54 194 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms