RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
SEMA4B-215ENST00000560089 CMYA5Q8N3K9 4069 aa12.37□□□□□ -0.43
SEMA4B-215ENST00000560089 MDFIQ99750 246 aa12.36□□□□□ -0.43
SEMA4B-215ENST00000560089 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
SEMA4B-215ENST00000560089 H3BPC8 53 aa12.35□□□□□ -0.43
SEMA4B-215ENST00000560089 ANK2Q01484 3957 aa12.34□□□□□ -0.43
SEMA4B-215ENST00000560089 IGKV2D-24A0A075B6R9 120 aa12.34□□□□□ -0.43
SEMA4B-215ENST00000560089 SPAG11AQ6PDA7 123 aa12.33□□□□□ -0.43
SEMA4B-215ENST00000560089 SPINK7P58062 85 aa12.33□□□□□ -0.44
SEMA4B-215ENST00000560089 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
SEMA4B-215ENST00000560089 LINC01558Q9Y6Z2 57 aa12.33□□□□□ -0.44
SEMA4B-215ENST00000560089 LINC01554Q52M75 96 aa12.33□□□□□ -0.44
SEMA4B-215ENST00000560089 CMC4P56277 68 aaPredicted RBP12.32□□□□□ -0.44
SEMA4B-215ENST00000560089 TNP2Q05952 138 aa12.32□□□□□ -0.44
SEMA4B-215ENST00000560089 C9orf163Q8N9P6 203 aa12.32□□□□□ -0.44
SEMA4B-215ENST00000560089 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
SEMA4B-215ENST00000560089 CASC2Q6XLA1 102 aa12.3□□□□□ -0.44
SEMA4B-215ENST00000560089 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
SEMA4B-215ENST00000560089 CAMK2N2Q96S95 79 aa12.29□□□□□ -0.44
SEMA4B-215ENST00000560089 KRTAP10-11P60412 298 aa12.27□□□□□ -0.44
SEMA4B-215ENST00000560089 PLAC8Q9NZF1 115 aa12.27□□□□□ -0.44
SEMA4B-215ENST00000560089 DEFB4AO15263 64 aa12.27□□□□□ -0.45
SEMA4B-215ENST00000560089 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
SEMA4B-215ENST00000560089 MGAM2Q2M2H8 2515 aa12.26□□□□□ -0.45
SEMA4B-215ENST00000560089 IGLV7-46A0A075B6I9 117 aa12.24□□□□□ -0.45
SEMA4B-215ENST00000560089 DHRS4-AS1Q9P1J3 65 aa12.24□□□□□ -0.45
SEMA4B-215ENST00000560089 EGFEM1PQ0D2K5 195 aa12.24□□□□□ -0.45
SEMA4B-215ENST00000560089 ADM2Q7Z4H4 148 aa12.23□□□□□ -0.45
SEMA4B-215ENST00000560089 KRTAP29-1A8MX34 341 aaPredicted RBP12.22□□□□□ -0.45
SEMA4B-215ENST00000560089 RPL37AP61513 92 aaKnown RBP12.2□□□□□ -0.46
SEMA4B-215ENST00000560089 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
SEMA4B-215ENST00000560089 X6R8D5 127 aa12.19□□□□□ -0.46
SEMA4B-215ENST00000560089 Q6ZRX8 168 aa12.18□□□□□ -0.46
SEMA4B-215ENST00000560089 Q8NAQ8 132 aa12.18□□□□□ -0.46
SEMA4B-215ENST00000560089 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
SEMA4B-215ENST00000560089 CNBPP62633 177 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-215ENST00000560089 A0A0G2JQZ4 141 aa12.16□□□□□ -0.46
SEMA4B-215ENST00000560089 A0A1W2PNN7 141 aa12.16□□□□□ -0.46
SEMA4B-215ENST00000560089 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.47
SEMA4B-215ENST00000560089 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.47
SEMA4B-215ENST00000560089 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
SEMA4B-215ENST00000560089 LINC00476Q8WZB0 136 aa12.14□□□□□ -0.47
SEMA4B-215ENST00000560089 LELP1Q5T871 98 aa12.11□□□□□ -0.47
SEMA4B-215ENST00000560089 A0A087WSZ3 146 aa12.1□□□□□ -0.47
SEMA4B-215ENST00000560089 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
SEMA4B-215ENST00000560089 RPL37AP8A6NKH3 93 aa12.1□□□□□ -0.47
SEMA4B-215ENST00000560089 DNAH3Q8TD57 4116 aa12.1□□□□□ -0.47
SEMA4B-215ENST00000560089 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
SEMA4B-215ENST00000560089 IGFL1Q6UW32 110 aa12.06□□□□□ -0.48
SEMA4B-215ENST00000560089 KRTAP4-16G5E9R7 235 aaPredicted RBP12.05□□□□□ -0.48
SEMA4B-215ENST00000560089 HTN3P15516 51 aa12.04□□□□□ -0.48
SEMA4B-215ENST00000560089 DNHD1Q96M86 4753 aa12.03□□□□□ -0.48
SEMA4B-215ENST00000560089 C15orf56Q8N910 161 aa12.02□□□□□ -0.48
SEMA4B-215ENST00000560089 HRES1P13985 223 aa12.01□□□□□ -0.49
SEMA4B-215ENST00000560089 ASB16-AS1Q495Z4 193 aa11.99□□□□□ -0.49
SEMA4B-215ENST00000560089 SPRR1AP35321 89 aa11.98□□□□□ -0.49
SEMA4B-215ENST00000560089 COL7A1Q02388 2944 aa11.98□□□□□ -0.49
SEMA4B-215ENST00000560089 A8MWP4 228 aa11.97□□□□□ -0.49
SEMA4B-215ENST00000560089 K7EIL1 84 aa11.97□□□□□ -0.49
SEMA4B-215ENST00000560089 RETNLBQ9BQ08 111 aa11.95□□□□□ -0.5
SEMA4B-215ENST00000560089 RTL8CO15255 209 aa11.94□□□□□ -0.5
SEMA4B-215ENST00000560089 SPART-AS1P0CW21 52 aa11.94□□□□□ -0.5
SEMA4B-215ENST00000560089 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
SEMA4B-215ENST00000560089 FAM168BA1KXE4 195 aa11.92□□□□□ -0.5
SEMA4B-215ENST00000560089 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-215ENST00000560089 H0Y9J4 135 aa11.9□□□□□ -0.5
SEMA4B-215ENST00000560089 MMP24-AS1A0A0U1RRL7 71 aa11.88□□□□□ -0.51
SEMA4B-215ENST00000560089 CSAG1Q6PB30 78 aa11.87□□□□□ -0.51
SEMA4B-215ENST00000560089 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
SEMA4B-215ENST00000560089 STAB2Q8WWQ8 2551 aa11.86□□□□□ -0.51
SEMA4B-215ENST00000560089 A0A087X002 238 aa11.86□□□□□ -0.51
SEMA4B-215ENST00000560089 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
SEMA4B-215ENST00000560089 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
SEMA4B-215ENST00000560089 IGLV8-61A0A075B6I0 122 aa11.84□□□□□ -0.51
SEMA4B-215ENST00000560089 TP53AIP1Q9HCN2 124 aa11.83□□□□□ -0.52
SEMA4B-215ENST00000560089 MEGF8Q7Z7M0 2845 aa11.82□□□□□ -0.52
SEMA4B-215ENST00000560089 DEFB131BA0A096LNP1 70 aa11.8□□□□□ -0.52
SEMA4B-215ENST00000560089 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
SEMA4B-215ENST00000560089 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
SEMA4B-215ENST00000560089 Q6ZR54 194 aa11.8□□□□□ -0.52
SEMA4B-215ENST00000560089 KRTAP7-1Q8IUC3 87 aa11.78□□□□□ -0.52
SEMA4B-215ENST00000560089 ZNF706Q9Y5V0 76 aaPredicted RBP11.77□□□□□ -0.53
SEMA4B-215ENST00000560089 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
SEMA4B-215ENST00000560089 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
SEMA4B-215ENST00000560089 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
SEMA4B-215ENST00000560089 PRLHP81277 87 aa11.73□□□□□ -0.53
SEMA4B-215ENST00000560089 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
SEMA4B-215ENST00000560089 LYSTQ99698 3801 aa11.72□□□□□ -0.53
SEMA4B-215ENST00000560089 A0A1B0GU69 56 aa11.7□□□□□ -0.54
SEMA4B-215ENST00000560089 MIR22HGQ0VDD5 57 aa11.69□□□□□ -0.54
SEMA4B-215ENST00000560089 C1orf134Q5TEV5 83 aa11.68□□□□□ -0.54
SEMA4B-215ENST00000560089 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
SEMA4B-215ENST00000560089 ACYP2P14621 99 aa11.64□□□□□ -0.55
SEMA4B-215ENST00000560089 C8orf17Q9NRJ1 99 aa11.63□□□□□ -0.55
SEMA4B-215ENST00000560089 UQCR11O14957 56 aa11.61□□□□□ -0.55
SEMA4B-215ENST00000560089 TGP01266 2768 aa11.61□□□□□ -0.55
SEMA4B-215ENST00000560089 A0A096LNI7 61 aa11.61□□□□□ -0.55
SEMA4B-215ENST00000560089 H3BNG1 76 aa11.58□□□□□ -0.56
SEMA4B-215ENST00000560089 FBN3Q75N90 2809 aa11.56□□□□□ -0.56
SEMA4B-215ENST00000560089 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms