RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 PRR15Q8IV56 129 aa13.77□□□□□ -0.2
PSMA4-215ENST00000559934 LINC00208Q96KT6 92 aa13.77□□□□□ -0.21
PSMA4-215ENST00000559934 MP68P56378 58 aa13.75□□□□□ -0.21
PSMA4-215ENST00000559934 J3QKU1 62 aa13.74□□□□□ -0.21
PSMA4-215ENST00000559934 SRRM2Q9UQ35 2752 aaKnown RBP13.73□□□□□ -0.21
PSMA4-215ENST00000559934 NDUFB1O75438 58 aa13.73□□□□□ -0.21
PSMA4-215ENST00000559934 A8MUN3 132 aa13.73□□□□□ -0.21
PSMA4-215ENST00000559934 IGKV2-24A0A0C4DH68 120 aa13.7□□□□□ -0.22
PSMA4-215ENST00000559934 KRTAP29-1A8MX34 341 aaPredicted RBP13.7□□□□□ -0.22
PSMA4-215ENST00000559934 B9D2Q9BPU9 175 aa13.7□□□□□ -0.22
PSMA4-215ENST00000559934 MAST4O15021 2626 aa13.68□□□□□ -0.22
PSMA4-215ENST00000559934 A0A096LNI7 61 aa13.68□□□□□ -0.22
PSMA4-215ENST00000559934 A8MU10 97 aa13.67□□□□□ -0.22
PSMA4-215ENST00000559934 H0Y9P7 68 aa13.67□□□□□ -0.22
PSMA4-215ENST00000559934 IGLV8-61A0A075B6I0 122 aa13.67□□□□□ -0.22
PSMA4-215ENST00000559934 UBE2AP49459 152 aa13.65□□□□□ -0.22
PSMA4-215ENST00000559934 CASC2Q6XLA1 102 aa13.65□□□□□ -0.22
PSMA4-215ENST00000559934 CNBPP62633 177 aaKnown RBP13.65□□□□□ -0.22
PSMA4-215ENST00000559934 NOTCH1P46531 2555 aa13.64□□□□□ -0.23
PSMA4-215ENST00000559934 DNAH10Q8IVF4 4471 aa13.63□□□□□ -0.23
PSMA4-215ENST00000559934 SEC61GP60059 68 aa13.62□□□□□ -0.23
PSMA4-215ENST00000559934 CMYA5Q8N3K9 4069 aa13.62□□□□□ -0.23
PSMA4-215ENST00000559934 Q5VV11 94 aa13.62□□□□□ -0.23
PSMA4-215ENST00000559934 STAB1Q9NY15 2570 aa13.61□□□□□ -0.23
PSMA4-215ENST00000559934 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
PSMA4-215ENST00000559934 PMAIP1Q13794 54 aa13.6□□□□□ -0.23
PSMA4-215ENST00000559934 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
PSMA4-215ENST00000559934 C16orf90A8MZG2 172 aa13.56□□□□□ -0.24
PSMA4-215ENST00000559934 SPANXA2-OT1Q8N9U9 137 aa13.56□□□□□ -0.24
PSMA4-215ENST00000559934 Q8N9P0 234 aaPredicted RBP13.55□□□□□ -0.24
PSMA4-215ENST00000559934 A8MWP4 228 aa13.55□□□□□ -0.24
PSMA4-215ENST00000559934 FBN1P35555 2871 aaKnown RBP13.55□□□□□ -0.24
PSMA4-215ENST00000559934 LINC00472Q9H8W2 130 aa13.55□□□□□ -0.24
PSMA4-215ENST00000559934 PHF5AQ7RTV0 110 aaKnown RBP13.54□□□□□ -0.24
PSMA4-215ENST00000559934 CHTF8P0CG12 524 aa13.53□□□□□ -0.24
PSMA4-215ENST00000559934 C9orf163Q8N9P6 203 aa13.52□□□□□ -0.25
PSMA4-215ENST00000559934 LYSTQ99698 3801 aa13.52□□□□□ -0.25
PSMA4-215ENST00000559934 H3BPC8 53 aa13.51□□□□□ -0.25
PSMA4-215ENST00000559934 KRTAP1-5Q9BYS1 174 aa13.51□□□□□ -0.25
PSMA4-215ENST00000559934 COL6A5A8TX70 2615 aa13.5□□□□□ -0.25
PSMA4-215ENST00000559934 CHKB-CPT1BH3BT56 60 aa13.5□□□□□ -0.25
PSMA4-215ENST00000559934 PRR15LQ9BU68 103 aa13.5□□□□□ -0.25
PSMA4-215ENST00000559934 NBEAL1Q6ZS30 2694 aa13.49□□□□□ -0.25
PSMA4-215ENST00000559934 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
PSMA4-215ENST00000559934 H0Y9J4 135 aa13.49□□□□□ -0.25
PSMA4-215ENST00000559934 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
PSMA4-215ENST00000559934 MMP24-AS1A0A0U1RRL7 71 aa13.46□□□□□ -0.26
PSMA4-215ENST00000559934 SPRR1BP22528 89 aa13.45□□□□□ -0.26
PSMA4-215ENST00000559934 LIMD2Q9BT23 127 aa13.45□□□□□ -0.26
PSMA4-215ENST00000559934 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
PSMA4-215ENST00000559934 COA5Q86WW8 74 aa13.43□□□□□ -0.26
PSMA4-215ENST00000559934 DNAH9Q9NYC9 4486 aa13.43□□□□□ -0.26
PSMA4-215ENST00000559934 PCOTHQ58A44 107 aa13.41□□□□□ -0.26
PSMA4-215ENST00000559934 HUWE1Q7Z6Z7 4374 aaKnown RBP13.41□□□□□ -0.26
PSMA4-215ENST00000559934 KRTAP24-1Q3LI83 254 aa13.38□□□□□ -0.27
PSMA4-215ENST00000559934 IGLV7-46A0A075B6I9 117 aa13.37□□□□□ -0.27
PSMA4-215ENST00000559934 COL7A1Q02388 2944 aa13.35□□□□□ -0.27
PSMA4-215ENST00000559934 LCA10Q71F78 164 aa13.34□□□□□ -0.27
PSMA4-215ENST00000559934 CD164Q04900 197 aa13.34□□□□□ -0.27
PSMA4-215ENST00000559934 SPTSSBQ8NFR3 76 aa13.34□□□□□ -0.27
PSMA4-215ENST00000559934 Q75L30 129 aa13.32□□□□□ -0.28
PSMA4-215ENST00000559934 Q96NJ1 140 aa13.31□□□□□ -0.28
PSMA4-215ENST00000559934 A6NED7 52 aa13.31□□□□□ -0.28
PSMA4-215ENST00000559934 IGLV9-49A0A0B4J1Y8 123 aa13.29□□□□□ -0.28
PSMA4-215ENST00000559934 LOC101927531A0A1B0GV80 90 aa13.28□□□□□ -0.28
PSMA4-215ENST00000559934 PANO1I0J062 215 aa13.28□□□□□ -0.28
PSMA4-215ENST00000559934 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
PSMA4-215ENST00000559934 SPAG11AQ6PDA7 123 aa13.25□□□□□ -0.29
PSMA4-215ENST00000559934 ASB16-AS1Q495Z4 193 aa13.25□□□□□ -0.29
PSMA4-215ENST00000559934 KRTAP13-1Q8IUC0 172 aa13.24□□□□□ -0.29
PSMA4-215ENST00000559934 C8orf17Q9NRJ1 99 aa13.24□□□□□ -0.29
PSMA4-215ENST00000559934 K7EIL1 84 aa13.23□□□□□ -0.29
PSMA4-215ENST00000559934 UBE2DNLQ8IWF7 75 aa13.23□□□□□ -0.29
PSMA4-215ENST00000559934 NDUFS5O43920 106 aa13.22□□□□□ -0.29
PSMA4-215ENST00000559934 MOBPQ13875 183 aa13.21□□□□□ -0.29
PSMA4-215ENST00000559934 TP53AIP1Q9HCN2 124 aa13.21□□□□□ -0.29
PSMA4-215ENST00000559934 IGHV6-1A0A0B4J1U7 121 aa13.2□□□□□ -0.3
PSMA4-215ENST00000559934 C14orf177Q52M58 125 aa13.2□□□□□ -0.3
PSMA4-215ENST00000559934 Q6ZR54 194 aa13.19□□□□□ -0.3
PSMA4-215ENST00000559934 ATP11AUNQ6ZP68 121 aa13.19□□□□□ -0.3
PSMA4-215ENST00000559934 DNAH7Q8WXX0 4024 aa13.19□□□□□ -0.3
PSMA4-215ENST00000559934 KTN1-AS1Q86SY8 53 aa13.18□□□□□ -0.3
PSMA4-215ENST00000559934 LINC01558Q9Y6Z2 57 aa13.16□□□□□ -0.3
PSMA4-215ENST00000559934 HRES1P13985 223 aa13.15□□□□□ -0.3
PSMA4-215ENST00000559934 PLAC8Q9NZF1 115 aa13.14□□□□□ -0.31
PSMA4-215ENST00000559934 A0A087X002 238 aa13.14□□□□□ -0.31
PSMA4-215ENST00000559934 NOTCH2NLQ7Z3S9 236 aa13.14□□□□□ -0.31
PSMA4-215ENST00000559934 CDC42SE1Q9NRR8 79 aa13.14□□□□□ -0.31
PSMA4-215ENST00000559934 A0A1B0GVX0 72 aa13.13□□□□□ -0.31
PSMA4-215ENST00000559934 A6NN06 94 aa13.12□□□□□ -0.31
PSMA4-215ENST00000559934 APLNQ9ULZ1 77 aa13.1□□□□□ -0.31
PSMA4-215ENST00000559934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
PSMA4-215ENST00000559934 SPINK7P58062 85 aa13.09□□□□□ -0.31
PSMA4-215ENST00000559934 MRPL34Q9BQ48 92 aaKnown RBP13.08□□□□□ -0.32
PSMA4-215ENST00000559934 ANAPC11Q9NYG5 84 aa13.08□□□□□ -0.32
PSMA4-215ENST00000559934 MGAM2Q2M2H8 2515 aa13.07□□□□□ -0.32
PSMA4-215ENST00000559934 CDK2AP2O75956 126 aa13.05□□□□□ -0.32
PSMA4-215ENST00000559934 LINC00483Q53H64 154 aa13.04□□□□□ -0.32
PSMA4-215ENST00000559934 RBM12B-AS1Q9P1G2 102 aa13.04□□□□□ -0.32
PSMA4-215ENST00000559934 WWC2-AS2Q96NR7 200 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms