RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 Q6ZQY7 126 aa6.58□□□□□ -1.36
SPG11-219ENST00000559822 MT1HP80294 61 aa6.57□□□□□ -1.36
SPG11-219ENST00000559822 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
SPG11-219ENST00000559822 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
SPG11-219ENST00000559822 BVES-AS1Q5T3Y7 98 aa6.56□□□□□ -1.36
SPG11-219ENST00000559822 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
SPG11-219ENST00000559822 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.55□□□□□ -1.36
SPG11-219ENST00000559822 PPDPFLQ8WWR9 84 aa6.55□□□□□ -1.36
SPG11-219ENST00000559822 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
SPG11-219ENST00000559822 SCGB1D1O95968 90 aa6.53□□□□□ -1.36
SPG11-219ENST00000559822 S100A6P06703 90 aa6.53□□□□□ -1.36
SPG11-219ENST00000559822 OCIAD2Q56VL3 154 aa6.53□□□□□ -1.36
SPG11-219ENST00000559822 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
SPG11-219ENST00000559822 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
SPG11-219ENST00000559822 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
SPG11-219ENST00000559822 SNHG12Q9BXW3 62 aa6.52□□□□□ -1.37
SPG11-219ENST00000559822 SNCGO76070 127 aa6.51□□□□□ -1.37
SPG11-219ENST00000559822 M0R2T5 61 aa6.5□□□□□ -1.37
SPG11-219ENST00000559822 C12orf57Q99622 126 aa6.5□□□□□ -1.37
SPG11-219ENST00000559822 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
SPG11-219ENST00000559822 LST1O00453 97 aa6.48□□□□□ -1.37
SPG11-219ENST00000559822 COX8AP10176 69 aa6.48□□□□□ -1.37
SPG11-219ENST00000559822 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
SPG11-219ENST00000559822 SS18L2Q9UHA2 77 aa6.48□□□□□ -1.37
SPG11-219ENST00000559822 Q75L30 129 aa6.47□□□□□ -1.37
SPG11-219ENST00000559822 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SPG11-219ENST00000559822 DLEU1O43261 78 aa6.46□□□□□ -1.38
SPG11-219ENST00000559822 S100A1P23297 94 aa6.46□□□□□ -1.38
SPG11-219ENST00000559822 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
SPG11-219ENST00000559822 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
SPG11-219ENST00000559822 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
SPG11-219ENST00000559822 H0YGX0 51 aa6.45□□□□□ -1.38
SPG11-219ENST00000559822 H3BUT2 72 aa6.45□□□□□ -1.38
SPG11-219ENST00000559822 GHRHP01286 108 aa6.44□□□□□ -1.38
SPG11-219ENST00000559822 Q6Q795 121 aa6.44□□□□□ -1.38
SPG11-219ENST00000559822 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
SPG11-219ENST00000559822 CFC1P0CG37 223 aa6.42□□□□□ -1.38
SPG11-219ENST00000559822 TEN1Q86WV5 123 aa6.42□□□□□ -1.38
SPG11-219ENST00000559822 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
SPG11-219ENST00000559822 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
SPG11-219ENST00000559822 Q96NJ1 140 aa6.41□□□□□ -1.38
SPG11-219ENST00000559822 A0A1B0GX51 115 aa6.4□□□□□ -1.38
SPG11-219ENST00000559822 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
SPG11-219ENST00000559822 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
SPG11-219ENST00000559822 A6NJY4 79 aa6.38□□□□□ -1.39
SPG11-219ENST00000559822 SPATA45Q537H7 98 aa6.38□□□□□ -1.39
SPG11-219ENST00000559822 PAM16Q9Y3D7 125 aa6.38□□□□□ -1.39
SPG11-219ENST00000559822 A0A087WSZ3 146 aa6.37□□□□□ -1.39
SPG11-219ENST00000559822 H3BMG7 143 aa6.37□□□□□ -1.39
SPG11-219ENST00000559822 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
SPG11-219ENST00000559822 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
SPG11-219ENST00000559822 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
SPG11-219ENST00000559822 FABP2P12104 132 aa6.36□□□□□ -1.39
SPG11-219ENST00000559822 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
SPG11-219ENST00000559822 A8MUU9 505 aa6.35□□□□□ -1.39
SPG11-219ENST00000559822 CEND1Q8N111 149 aa6.35□□□□□ -1.39
SPG11-219ENST00000559822 TRBV20-1A0A075B6N2 111 aa6.34□□□□□ -1.39
SPG11-219ENST00000559822 C2orf91Q6ZV80 131 aa6.34□□□□□ -1.39
SPG11-219ENST00000559822 H3BQ85 93 aa6.33□□□□□ -1.4
SPG11-219ENST00000559822 SIGMAR1Q99720 223 aa6.33□□□□□ -1.4
SPG11-219ENST00000559822 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
SPG11-219ENST00000559822 DNAL4O96015 105 aa6.32□□□□□ -1.4
SPG11-219ENST00000559822 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
SPG11-219ENST00000559822 TRIAP1O43715 76 aa6.3□□□□□ -1.4
SPG11-219ENST00000559822 TRBV7-4A0A0J9YYF1 115 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 FXYD2P54710 66 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 DSCR10P59022 87 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
SPG11-219ENST00000559822 COX6CP09669 75 aa6.28□□□□□ -1.4
SPG11-219ENST00000559822 LINC00313P59037 77 aa6.28□□□□□ -1.4
SPG11-219ENST00000559822 TMEM256-PLSCR3K7ERE1 68 aa6.27□□□□□ -1.41
SPG11-219ENST00000559822 IGKV4-1P06312 121 aa6.27□□□□□ -1.41
SPG11-219ENST00000559822 PSMB2P49721 201 aa6.26□□□□□ -1.41
SPG11-219ENST00000559822 HSD52Q0P140 79 aa6.25□□□□□ -1.41
SPG11-219ENST00000559822 TRACP01848 142 aa6.24□□□□□ -1.41
SPG11-219ENST00000559822 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
SPG11-219ENST00000559822 A0A1B0GV72 72 aa6.23□□□□□ -1.41
SPG11-219ENST00000559822 CCKP06307 115 aa6.23□□□□□ -1.41
SPG11-219ENST00000559822 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
SPG11-219ENST00000559822 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
SPG11-219ENST00000559822 UBE2V1Q13404 147 aa6.21□□□□□ -1.42
SPG11-219ENST00000559822 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
SPG11-219ENST00000559822 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.42
SPG11-219ENST00000559822 K7ERJ3 54 aa6.2□□□□□ -1.42
SPG11-219ENST00000559822 IGHV6-1A0A0B4J1U7 121 aa6.19□□□□□ -1.42
SPG11-219ENST00000559822 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
SPG11-219ENST00000559822 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
SPG11-219ENST00000559822 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
SPG11-219ENST00000559822 PYY3Q5JQD4 70 aa6.18□□□□□ -1.42
SPG11-219ENST00000559822 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
SPG11-219ENST00000559822 RBM3P98179 157 aaKnown RBP6.17□□□□□ -1.42
SPG11-219ENST00000559822 VPS25Q9BRG1 176 aa6.17□□□□□ -1.42
SPG11-219ENST00000559822 UQCR10Q9UDW1 63 aa6.17□□□□□ -1.42
SPG11-219ENST00000559822 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
SPG11-219ENST00000559822 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
SPG11-219ENST00000559822 DSCR8Q96T75 97 aa6.16□□□□□ -1.42
SPG11-219ENST00000559822 A0A1B0GVX0 72 aa6.14□□□□□ -1.43
SPG11-219ENST00000559822 HRES1P13985 223 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms