RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 C9orf92A6NGG3 77 aa7.09□□□□□ -1.27
TPM1-220ENST00000559556 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
TPM1-220ENST00000559556 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
TPM1-220ENST00000559556 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
TPM1-220ENST00000559556 CD164Q04900 197 aa7.07□□□□□ -1.28
TPM1-220ENST00000559556 A6NDN8 102 aa7.06□□□□□ -1.28
TPM1-220ENST00000559556 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
TPM1-220ENST00000559556 LAMTOR3Q9UHA4 124 aa7.06□□□□□ -1.28
TPM1-220ENST00000559556 A4D1N5 150 aa7.05□□□□□ -1.28
TPM1-220ENST00000559556 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
TPM1-220ENST00000559556 BVES-AS1Q5T3Y7 98 aa7.05□□□□□ -1.28
TPM1-220ENST00000559556 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
TPM1-220ENST00000559556 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
TPM1-220ENST00000559556 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
TPM1-220ENST00000559556 FXYD2P54710 66 aa7.03□□□□□ -1.28
TPM1-220ENST00000559556 Q5XG85 94 aa7.03□□□□□ -1.28
TPM1-220ENST00000559556 RAB37Q96AX2 223 aa7.03□□□□□ -1.28
TPM1-220ENST00000559556 A0A0B4J2C4 111 aa7.02□□□□□ -1.29
TPM1-220ENST00000559556 COX7BP24311 80 aa7.02□□□□□ -1.29
TPM1-220ENST00000559556 Q1RN00 199 aa7.02□□□□□ -1.29
TPM1-220ENST00000559556 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
TPM1-220ENST00000559556 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
TPM1-220ENST00000559556 TEX49A0A1B0GTD5 131 aa7□□□□□ -1.29
TPM1-220ENST00000559556 A0A1B0GWB2 263 aa7□□□□□ -1.29
TPM1-220ENST00000559556 H7C2G1 150 aa7□□□□□ -1.29
TPM1-220ENST00000559556 CFC1P0CG37 223 aa7□□□□□ -1.29
TPM1-220ENST00000559556 BATFQ16520 125 aa7□□□□□ -1.29
TPM1-220ENST00000559556 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
TPM1-220ENST00000559556 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
TPM1-220ENST00000559556 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
TPM1-220ENST00000559556 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
TPM1-220ENST00000559556 SMIM29Q86T20 159 aa6.98□□□□□ -1.29
TPM1-220ENST00000559556 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
TPM1-220ENST00000559556 SNHG12Q9BXW3 62 aa6.98□□□□□ -1.29
TPM1-220ENST00000559556 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
TPM1-220ENST00000559556 COL5A1-AS1Q5SY13 56 aa6.97□□□□□ -1.29
TPM1-220ENST00000559556 M0R2T5 61 aa6.95□□□□□ -1.3
TPM1-220ENST00000559556 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
TPM1-220ENST00000559556 K7ERJ3 54 aa6.93□□□□□ -1.3
TPM1-220ENST00000559556 COX6CP09669 75 aa6.93□□□□□ -1.3
TPM1-220ENST00000559556 COX6B2Q6YFQ2 88 aa6.93□□□□□ -1.3
TPM1-220ENST00000559556 VAMP3Q15836 100 aa6.92□□□□□ -1.3
TPM1-220ENST00000559556 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
TPM1-220ENST00000559556 C9orf118A6NHY6 69 aa6.9□□□□□ -1.3
TPM1-220ENST00000559556 PSMB2P49721 201 aa6.9□□□□□ -1.3
TPM1-220ENST00000559556 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.3
TPM1-220ENST00000559556 H0YGX0 51 aa6.89□□□□□ -1.31
TPM1-220ENST00000559556 TAX1BP3O14907 124 aa6.89□□□□□ -1.31
TPM1-220ENST00000559556 SNCGO76070 127 aa6.89□□□□□ -1.31
TPM1-220ENST00000559556 TCL1BO95988 128 aa6.89□□□□□ -1.31
TPM1-220ENST00000559556 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
TPM1-220ENST00000559556 H3BUT2 72 aa6.86□□□□□ -1.31
TPM1-220ENST00000559556 FABP2P12104 132 aa6.86□□□□□ -1.31
TPM1-220ENST00000559556 TRIAP1O43715 76 aa6.85□□□□□ -1.31
TPM1-220ENST00000559556 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
TPM1-220ENST00000559556 A0A1B0GX51 115 aa6.84□□□□□ -1.31
TPM1-220ENST00000559556 A0A1W2PPM0 123 aa6.84□□□□□ -1.31
TPM1-220ENST00000559556 F8WEM9 126 aa6.83□□□□□ -1.32
TPM1-220ENST00000559556 GHRHP01286 108 aa6.81□□□□□ -1.32
TPM1-220ENST00000559556 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
TPM1-220ENST00000559556 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
TPM1-220ENST00000559556 Q6JHZ5 121 aa6.81□□□□□ -1.32
TPM1-220ENST00000559556 Q75L30 129 aa6.81□□□□□ -1.32
TPM1-220ENST00000559556 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
TPM1-220ENST00000559556 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
TPM1-220ENST00000559556 LINC00575Q6W349 94 aa6.8□□□□□ -1.32
TPM1-220ENST00000559556 NAA38Q9BRA0 125 aaKnown RBP6.8□□□□□ -1.32
TPM1-220ENST00000559556 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
TPM1-220ENST00000559556 DNAL4O96015 105 aa6.79□□□□□ -1.32
TPM1-220ENST00000559556 GTF2H5Q6ZYL4 71 aa6.79□□□□□ -1.32
TPM1-220ENST00000559556 H3BQ85 93 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 LST1O00453 97 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 TRACP01848 142 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 Q6ZQY7 126 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
TPM1-220ENST00000559556 OCIAD2Q56VL3 154 aa6.77□□□□□ -1.33
TPM1-220ENST00000559556 Q6Q795 121 aa6.77□□□□□ -1.33
TPM1-220ENST00000559556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.76□□□□□ -1.33
TPM1-220ENST00000559556 USH2AO75445 5202 aa6.76□□□□□ -1.33
TPM1-220ENST00000559556 K7EP34 96 aa6.75□□□□□ -1.33
TPM1-220ENST00000559556 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
TPM1-220ENST00000559556 FAM218AQ96MZ4 157 aa6.74□□□□□ -1.33
TPM1-220ENST00000559556 PPDPFLQ8WWR9 84 aa6.73□□□□□ -1.33
TPM1-220ENST00000559556 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
TPM1-220ENST00000559556 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
TPM1-220ENST00000559556 ORMDL1Q9P0S3 153 aa6.72□□□□□ -1.33
TPM1-220ENST00000559556 A0A1B0GV90 55 aa6.71□□□□□ -1.34
TPM1-220ENST00000559556 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
TPM1-220ENST00000559556 H3BMG7 143 aa6.71□□□□□ -1.34
TPM1-220ENST00000559556 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.34
TPM1-220ENST00000559556 Q96NJ1 140 aa6.7□□□□□ -1.34
TPM1-220ENST00000559556 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
TPM1-220ENST00000559556 C9JAW5 83 aa6.69□□□□□ -1.34
TPM1-220ENST00000559556 BAALC-AS2P0C853 105 aa6.69□□□□□ -1.34
TPM1-220ENST00000559556 UBE2V1Q13404 147 aa6.69□□□□□ -1.34
TPM1-220ENST00000559556 A8MUU9 505 aa6.68□□□□□ -1.34
TPM1-220ENST00000559556 F8W1H4 67 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms