RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 A0A1B0GW54 56 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 BPY2O14599 106 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 BCE1O60756 84 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 LINC00476Q8WZB0 136 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 DNAH17Q9UFH2 4485 aa6.88□□□□□ -1.31
SPG11-217ENST00000559511 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
SPG11-217ENST00000559511 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
SPG11-217ENST00000559511 A0A087WTM6 91 aa6.87□□□□□ -1.31
SPG11-217ENST00000559511 F8WEM9 126 aa6.86□□□□□ -1.31
SPG11-217ENST00000559511 IGFL1Q6UW32 110 aa6.86□□□□□ -1.31
SPG11-217ENST00000559511 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
SPG11-217ENST00000559511 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
SPG11-217ENST00000559511 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
SPG11-217ENST00000559511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
SPG11-217ENST00000559511 H0Y9J4 135 aa6.85□□□□□ -1.31
SPG11-217ENST00000559511 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
SPG11-217ENST00000559511 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.32
SPG11-217ENST00000559511 LY6G6CO95867 125 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 UBE2AP49459 152 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 WWC2-AS2Q96NR7 200 aa6.83□□□□□ -1.32
SPG11-217ENST00000559511 TMEM258P61165 79 aa6.82□□□□□ -1.32
SPG11-217ENST00000559511 C1orf134Q5TEV5 83 aa6.82□□□□□ -1.32
SPG11-217ENST00000559511 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
SPG11-217ENST00000559511 SPRR1BP22528 89 aa6.81□□□□□ -1.32
SPG11-217ENST00000559511 DSCR10P59022 87 aa6.81□□□□□ -1.32
SPG11-217ENST00000559511 DNAH6Q9C0G6 4158 aa6.8□□□□□ -1.32
SPG11-217ENST00000559511 RTL8CO15255 209 aa6.8□□□□□ -1.32
SPG11-217ENST00000559511 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
SPG11-217ENST00000559511 A0A087WSZ3 146 aa6.79□□□□□ -1.32
SPG11-217ENST00000559511 K7EQZ3 153 aa6.79□□□□□ -1.32
SPG11-217ENST00000559511 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
SPG11-217ENST00000559511 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
SPG11-217ENST00000559511 H7BZZ5 65 aa6.77□□□□□ -1.33
SPG11-217ENST00000559511 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
SPG11-217ENST00000559511 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
SPG11-217ENST00000559511 V9GYY9 64 aa6.74□□□□□ -1.33
SPG11-217ENST00000559511 J3KT08 172 aa6.74□□□□□ -1.33
SPG11-217ENST00000559511 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
SPG11-217ENST00000559511 DNAH11Q96DT5 4516 aa6.73□□□□□ -1.33
SPG11-217ENST00000559511 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
SPG11-217ENST00000559511 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
SPG11-217ENST00000559511 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
SPG11-217ENST00000559511 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
SPG11-217ENST00000559511 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
SPG11-217ENST00000559511 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
SPG11-217ENST00000559511 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.34
SPG11-217ENST00000559511 OXTP01178 125 aa6.71□□□□□ -1.34
SPG11-217ENST00000559511 FAM236CP0DP71 79 aa6.71□□□□□ -1.34
SPG11-217ENST00000559511 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
SPG11-217ENST00000559511 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
SPG11-217ENST00000559511 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
SPG11-217ENST00000559511 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
SPG11-217ENST00000559511 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
SPG11-217ENST00000559511 LINC00483Q53H64 154 aa6.69□□□□□ -1.34
SPG11-217ENST00000559511 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
SPG11-217ENST00000559511 PKD1P98161 4303 aa6.69□□□□□ -1.34
SPG11-217ENST00000559511 KRTAP10-2P60368 255 aa6.68□□□□□ -1.34
SPG11-217ENST00000559511 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
SPG11-217ENST00000559511 NDUFC1O43677 76 aa6.68□□□□□ -1.34
SPG11-217ENST00000559511 LCE6AA0A183 80 aa6.67□□□□□ -1.34
SPG11-217ENST00000559511 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
SPG11-217ENST00000559511 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
SPG11-217ENST00000559511 ZNF861PO60384 105 aa6.65□□□□□ -1.34
SPG11-217ENST00000559511 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.34
SPG11-217ENST00000559511 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.35
SPG11-217ENST00000559511 A8MWP4 228 aa6.64□□□□□ -1.35
SPG11-217ENST00000559511 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
SPG11-217ENST00000559511 KRTAP29-1A8MX34 341 aaPredicted RBP6.64□□□□□ -1.35
SPG11-217ENST00000559511 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
SPG11-217ENST00000559511 MOBPQ13875 183 aa6.62□□□□□ -1.35
SPG11-217ENST00000559511 Q96NJ1 140 aa6.62□□□□□ -1.35
SPG11-217ENST00000559511 IGLV7-43P04211 117 aa6.61□□□□□ -1.35
SPG11-217ENST00000559511 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
SPG11-217ENST00000559511 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
SPG11-217ENST00000559511 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
SPG11-217ENST00000559511 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
SPG11-217ENST00000559511 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
SPG11-217ENST00000559511 KRTAP10-1P60331 282 aa6.59□□□□□ -1.35
SPG11-217ENST00000559511 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.35
SPG11-217ENST00000559511 Q6ZSA8 131 aa6.59□□□□□ -1.35
SPG11-217ENST00000559511 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
SPG11-217ENST00000559511 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
SPG11-217ENST00000559511 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
SPG11-217ENST00000559511 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
SPG11-217ENST00000559511 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
SPG11-217ENST00000559511 Q5XG85 94 aa6.55□□□□□ -1.36
SPG11-217ENST00000559511 NDUFB1O75438 58 aa6.55□□□□□ -1.36
SPG11-217ENST00000559511 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
SPG11-217ENST00000559511 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
SPG11-217ENST00000559511 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
SPG11-217ENST00000559511 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
SPG11-217ENST00000559511 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
SPG11-217ENST00000559511 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
SPG11-217ENST00000559511 MP68P56378 58 aa6.52□□□□□ -1.37
SPG11-217ENST00000559511 H0Y9P7 68 aa6.51□□□□□ -1.37
SPG11-217ENST00000559511 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
SPG11-217ENST00000559511 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms