RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 DPH3Q96FX2 82 aa9.9□□□□□ -0.82
CDC42BPB-204ENST00000559043 UQCRQO14949 82 aa9.9□□□□□ -0.83
CDC42BPB-204ENST00000559043 C3orf22Q8N5N4 141 aa9.9□□□□□ -0.83
CDC42BPB-204ENST00000559043 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.83
CDC42BPB-204ENST00000559043 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
CDC42BPB-204ENST00000559043 LINC00474Q9P2X8 69 aa9.89□□□□□ -0.83
CDC42BPB-204ENST00000559043 EPM2AB3EWF7 344 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 IGLV5-48A0A075B6I7 105 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 COX7CP15954 63 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 PLAC8Q9NZF1 115 aa9.88□□□□□ -0.83
CDC42BPB-204ENST00000559043 CXCL6P80162 114 aa9.86□□□□□ -0.83
CDC42BPB-204ENST00000559043 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
CDC42BPB-204ENST00000559043 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
CDC42BPB-204ENST00000559043 KIAA1109Q2LD37 5005 aa9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 PHF5AQ7RTV0 110 aaKnown RBP9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 ST20-AS1Q8NBB2 130 aa9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
CDC42BPB-204ENST00000559043 ERC2-IT1O76042 136 aa9.82□□□□□ -0.84
CDC42BPB-204ENST00000559043 C9orf153Q5TBE3 101 aa9.82□□□□□ -0.84
CDC42BPB-204ENST00000559043 KRTAP17-1Q9BYP8 105 aa9.82□□□□□ -0.84
CDC42BPB-204ENST00000559043 UBE2BP63146 152 aa9.81□□□□□ -0.84
CDC42BPB-204ENST00000559043 CRYGAP11844 174 aa9.8□□□□□ -0.84
CDC42BPB-204ENST00000559043 HSPG2P98160 4391 aa9.8□□□□□ -0.84
CDC42BPB-204ENST00000559043 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
CDC42BPB-204ENST00000559043 RYR1P21817 5038 aa9.79□□□□□ -0.84
CDC42BPB-204ENST00000559043 A0A1B0GW54 56 aa9.79□□□□□ -0.84
CDC42BPB-204ENST00000559043 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-204ENST00000559043 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
CDC42BPB-204ENST00000559043 BCE1O60756 84 aa9.77□□□□□ -0.84
CDC42BPB-204ENST00000559043 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
CDC42BPB-204ENST00000559043 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
CDC42BPB-204ENST00000559043 A0A1W2PNM2 257 aa9.74□□□□□ -0.85
CDC42BPB-204ENST00000559043 NREPQ16612 68 aa9.74□□□□□ -0.85
CDC42BPB-204ENST00000559043 FAT1Q14517 4588 aa9.74□□□□□ -0.85
CDC42BPB-204ENST00000559043 PRLHP81277 87 aa9.72□□□□□ -0.85
CDC42BPB-204ENST00000559043 Q8NBF4 154 aa9.72□□□□□ -0.85
CDC42BPB-204ENST00000559043 VPS13BQ7Z7G8 4022 aa9.72□□□□□ -0.85
CDC42BPB-204ENST00000559043 SPRR4Q96PI1 79 aa9.72□□□□□ -0.85
CDC42BPB-204ENST00000559043 H0Y9J4 135 aa9.7□□□□□ -0.86
CDC42BPB-204ENST00000559043 PSORS1C2Q9UIG4 136 aa9.7□□□□□ -0.86
CDC42BPB-204ENST00000559043 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
CDC42BPB-204ENST00000559043 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
CDC42BPB-204ENST00000559043 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
CDC42BPB-204ENST00000559043 BPY2O14599 106 aa9.67□□□□□ -0.86
CDC42BPB-204ENST00000559043 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
CDC42BPB-204ENST00000559043 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPB-204ENST00000559043 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
CDC42BPB-204ENST00000559043 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
CDC42BPB-204ENST00000559043 F8WEM9 126 aa9.66□□□□□ -0.86
CDC42BPB-204ENST00000559043 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
CDC42BPB-204ENST00000559043 Q8N9L7 120 aa9.64□□□□□ -0.87
CDC42BPB-204ENST00000559043 SPRR1BP22528 89 aa9.63□□□□□ -0.87
CDC42BPB-204ENST00000559043 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
CDC42BPB-204ENST00000559043 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-204ENST00000559043 Q8N1X5 172 aa9.62□□□□□ -0.87
CDC42BPB-204ENST00000559043 KRTAP4-5Q9BYR2 181 aa9.61□□□□□ -0.87
CDC42BPB-204ENST00000559043 Q5VSD8 79 aa9.61□□□□□ -0.87
CDC42BPB-204ENST00000559043 KRTAP13-1Q8IUC0 172 aa9.6□□□□□ -0.87
CDC42BPB-204ENST00000559043 UBE2AP49459 152 aa9.59□□□□□ -0.87
CDC42BPB-204ENST00000559043 TMEM258P61165 79 aa9.59□□□□□ -0.87
CDC42BPB-204ENST00000559043 HERC2O95714 4834 aa9.59□□□□□ -0.87
CDC42BPB-204ENST00000559043 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
CDC42BPB-204ENST00000559043 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
CDC42BPB-204ENST00000559043 IGLV7-43P04211 117 aa9.57□□□□□ -0.88
CDC42BPB-204ENST00000559043 A0A0G2JQZ4 141 aa9.57□□□□□ -0.88
CDC42BPB-204ENST00000559043 DSCR10P59022 87 aa9.55□□□□□ -0.88
CDC42BPB-204ENST00000559043 KLKP1Q107X0 134 aa9.55□□□□□ -0.88
CDC42BPB-204ENST00000559043 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
CDC42BPB-204ENST00000559043 OCR1Q9BZK8 76 aa9.53□□□□□ -0.88
CDC42BPB-204ENST00000559043 ZNF861PO60384 105 aa9.52□□□□□ -0.89
CDC42BPB-204ENST00000559043 A0A087WSZ3 146 aa9.5□□□□□ -0.89
CDC42BPB-204ENST00000559043 K7EQZ3 153 aa9.5□□□□□ -0.89
CDC42BPB-204ENST00000559043 RPS28P62857 69 aaKnown RBP9.5□□□□□ -0.89
CDC42BPB-204ENST00000559043 H7BZZ5 65 aa9.49□□□□□ -0.89
CDC42BPB-204ENST00000559043 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
CDC42BPB-204ENST00000559043 SNURFQ9Y675 71 aa9.46□□□□□ -0.89
CDC42BPB-204ENST00000559043 J3KT08 172 aa9.46□□□□□ -0.9
CDC42BPB-204ENST00000559043 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
CDC42BPB-204ENST00000559043 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
CDC42BPB-204ENST00000559043 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
CDC42BPB-204ENST00000559043 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPB-204ENST00000559043 ABCA13Q86UQ4 5058 aa9.44□□□□□ -0.9
CDC42BPB-204ENST00000559043 NDUFC1O43677 76 aa9.44□□□□□ -0.9
CDC42BPB-204ENST00000559043 HCG22E2RYF7 251 aa9.42□□□□□ -0.9
CDC42BPB-204ENST00000559043 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
CDC42BPB-204ENST00000559043 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
CDC42BPB-204ENST00000559043 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
CDC42BPB-204ENST00000559043 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
CDC42BPB-204ENST00000559043 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
CDC42BPB-204ENST00000559043 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
CDC42BPB-204ENST00000559043 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.9
CDC42BPB-204ENST00000559043 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-204ENST00000559043 LRP1Q07954 4544 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-204ENST00000559043 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
CDC42BPB-204ENST00000559043 IGLV9-49A0A0B4J1Y8 123 aa9.35□□□□□ -0.91
CDC42BPB-204ENST00000559043 A8MWP4 228 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms