RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 A0A1W2PNN7 141 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 A8MU10 97 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
HMG20A-204ENST00000558288 LCE6AA0A183 80 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 Q6ZRX8 168 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 PRR15LQ9BU68 103 aa3.28□□□□□ -1.88
HMG20A-204ENST00000558288 Q8NAQ8 132 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
HMG20A-204ENST00000558288 Q9BRP9 147 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 A0A1B0GW54 56 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 UBE2AP49459 152 aa3.27□□□□□ -1.89
HMG20A-204ENST00000558288 Q5VV11 94 aa3.26□□□□□ -1.89
HMG20A-204ENST00000558288 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
HMG20A-204ENST00000558288 RPL37AP61513 92 aaKnown RBP3.26□□□□□ -1.89
HMG20A-204ENST00000558288 CD164Q04900 197 aa3.26□□□□□ -1.89
HMG20A-204ENST00000558288 A0A087WSZ3 146 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 A6NED7 52 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 H0Y9P7 68 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 LINC00476Q8WZB0 136 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 TNP2Q05952 138 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
HMG20A-204ENST00000558288 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
HMG20A-204ENST00000558288 IGLV1-50A0A075B6I6 118 aa3.24□□□□□ -1.89
HMG20A-204ENST00000558288 C16orf90A8MZG2 172 aa3.23□□□□□ -1.89
HMG20A-204ENST00000558288 CASC2Q6XLA1 102 aa3.23□□□□□ -1.89
HMG20A-204ENST00000558288 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
HMG20A-204ENST00000558288 Q8N9P0 234 aaPredicted RBP3.23□□□□□ -1.89
HMG20A-204ENST00000558288 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
HMG20A-204ENST00000558288 UBE2DNLQ8IWF7 75 aa3.22□□□□□ -1.89
HMG20A-204ENST00000558288 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
HMG20A-204ENST00000558288 PRLHP81277 87 aa3.22□□□□□ -1.89
HMG20A-204ENST00000558288 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
HMG20A-204ENST00000558288 RBM12B-AS1Q9P1G2 102 aa3.22□□□□□ -1.89
HMG20A-204ENST00000558288 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
HMG20A-204ENST00000558288 H0Y9J4 135 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 LCE2BO14633 110 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 SPRR1AP35321 89 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 COA5Q86WW8 74 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
HMG20A-204ENST00000558288 A0A096LNI7 61 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 NUPR2A6NF83 97 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 LINC01556Q5JQF7 62 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 ATP11AUNQ6ZP68 121 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 LCA10Q71F78 164 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 C11orf45Q8TAV5 145 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 RYR3Q15413 4870 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
HMG20A-204ENST00000558288 DEFB131BA0A096LNP1 70 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 H3BPC8 53 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 PLA2G2DQ9UNK4 145 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 NDUFS5O43920 106 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 TLX1NBP0CAT3 122 aa3.19□□□□□ -1.9
HMG20A-204ENST00000558288 Q75L30 129 aa3.18□□□□□ -1.9
HMG20A-204ENST00000558288 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
HMG20A-204ENST00000558288 KRTAP29-1A8MX34 341 aaPredicted RBP3.18□□□□□ -1.9
HMG20A-204ENST00000558288 H3BNG1 76 aa3.18□□□□□ -1.9
HMG20A-204ENST00000558288 CNBPP62633 177 aaKnown RBP3.18□□□□□ -1.9
HMG20A-204ENST00000558288 IGLV5-37A0A075B6J1 123 aa3.18□□□□□ -1.9
HMG20A-204ENST00000558288 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
HMG20A-204ENST00000558288 A8MWP4 228 aa3.17□□□□□ -1.9
HMG20A-204ENST00000558288 SRRM2Q9UQ35 2752 aaKnown RBP3.17□□□□□ -1.9
HMG20A-204ENST00000558288 C4orf48Q5BLP8 95 aa3.17□□□□□ -1.9
HMG20A-204ENST00000558288 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
HMG20A-204ENST00000558288 CDC42SE1Q9NRR8 79 aa3.17□□□□□ -1.9
HMG20A-204ENST00000558288 A6NN06 94 aa3.16□□□□□ -1.9
HMG20A-204ENST00000558288 DNAH9Q9NYC9 4486 aa3.16□□□□□ -1.9
HMG20A-204ENST00000558288 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.9
HMG20A-204ENST00000558288 DNAH10OSP0CZ25 163 aa3.15□□□□□ -1.9
HMG20A-204ENST00000558288 C7orf65Q6ZTY9 151 aa3.15□□□□□ -1.9
HMG20A-204ENST00000558288 MOBPQ13875 183 aa3.15□□□□□ -1.91
HMG20A-204ENST00000558288 SPINK7P58062 85 aa3.14□□□□□ -1.91
HMG20A-204ENST00000558288 PHF5AQ7RTV0 110 aaKnown RBP3.14□□□□□ -1.91
HMG20A-204ENST00000558288 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
HMG20A-204ENST00000558288 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
HMG20A-204ENST00000558288 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
HMG20A-204ENST00000558288 LINC00472Q9H8W2 130 aa3.13□□□□□ -1.91
HMG20A-204ENST00000558288 LINC01558Q9Y6Z2 57 aa3.13□□□□□ -1.91
HMG20A-204ENST00000558288 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
HMG20A-204ENST00000558288 IGHV6-1A0A0B4J1U7 121 aa3.12□□□□□ -1.91
HMG20A-204ENST00000558288 IGLV9-49A0A0B4J1Y8 123 aa3.12□□□□□ -1.91
HMG20A-204ENST00000558288 CDK2AP2O75956 126 aa3.12□□□□□ -1.91
HMG20A-204ENST00000558288 CHTF8P0CG12 524 aa3.11□□□□□ -1.91
HMG20A-204ENST00000558288 TP53AIP1Q9HCN2 124 aa3.11□□□□□ -1.91
HMG20A-204ENST00000558288 HRES1P13985 223 aa3.11□□□□□ -1.91
HMG20A-204ENST00000558288 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
HMG20A-204ENST00000558288 PRR26Q8N8Z3 221 aa3.1□□□□□ -1.91
HMG20A-204ENST00000558288 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
HMG20A-204ENST00000558288 KRTAP11-1Q8IUC1 163 aa3.1□□□□□ -1.91
HMG20A-204ENST00000558288 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
HMG20A-204ENST00000558288 HUWE1Q7Z6Z7 4374 aaKnown RBP3.09□□□□□ -1.91
HMG20A-204ENST00000558288 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms