RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SPANXCQ9NY87 97 aa2.97□□□□□ -1.93
RTF1-204ENST00000558117 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
RTF1-204ENST00000558117 TRBV6-5A0A0K0K1A5 114 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 I3L3M4 83 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 J3KT08 172 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 LEPROTL1O95214 131 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 PPP1R17O96001 155 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 HBDP02042 147 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 CKS1BP61024 79 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 PYY3Q5JQD4 70 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 PRADC1Q9BSG0 188 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 LAMTOR3Q9UHA4 124 aa2.96□□□□□ -1.94
RTF1-204ENST00000558117 TRBV7-3A0A075B6L6 115 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 TRBV6-4A0A1B0GX49 114 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 LINC01546A6NGU7 62 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 UBE2D3P61077 147 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 UBE2D2P62837 147 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 COX6A2Q02221 97 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 RHOHQ15669 191 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 FAM229BQ4G0N7 80 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 IFI27L1Q96BM0 104 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 TMEM126AQ9H061 195 aa2.95□□□□□ -1.94
RTF1-204ENST00000558117 IGKV3OR2-268A0A0C4DH90 116 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 TMEM262E9PQX1 116 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 SYS1-DBNDD2H3BUS1 97 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 HIST1H4AP62805 103 aaKnown RBP2.94□□□□□ -1.94
RTF1-204ENST00000558117 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 IGFL1Q6UW32 110 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 C2orf91Q6ZV80 131 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 C12orf57Q99622 126 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 PRO1933Q9H354 126 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 HSPB8Q9UJY1 196 aa2.94□□□□□ -1.94
RTF1-204ENST00000558117 TRBV10-1A0A0K0K1A3 114 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 M0R378 163 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 TAX1BP3O14907 124 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 AMMECR1LQ6DCA0 310 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 ENHOQ6UWT2 76 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
RTF1-204ENST00000558117 TRBV6-8A0A0A6YYG3 113 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.92□□□□□ -1.94
RTF1-204ENST00000558117 A0A1B0GU33 70 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 XCL1P47992 114 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 MIAQ16674 131 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 C1orf137Q5JT78 98 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 KRTAP26-1Q6PEX3 210 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 CLPSL2Q6UWE3 100 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 Q6ZUT4 128 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 TMEM141Q96I45 108 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 CST9LQ9H4G1 147 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
RTF1-204ENST00000558117 UBE2D4Q9Y2X8 147 aa2.92□□□□□ -1.94
RTF1-204ENST00000558117 TRBV25-1A0A075B6N4 114 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 A0A096LNI7 61 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 TRAV13-1A0A0B4J241 112 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 C20orf202A1L168 122 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 SMIM6P0DI80 62 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 LINC01545Q5VT33 79 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 OR5A1Q8NGJ0 315 aa2.91□□□□□ -1.94
RTF1-204ENST00000558117 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 K7EMI3 77 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 DPM2O94777 84 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 IGKCP01834 107 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 SPATA45Q537H7 98 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 C1orf64Q8NEQ6 169 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 C14orf144Q96I85 54 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 MIEN1Q9BRT3 115 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 VAMP8Q9BV40 100 aa2.9□□□□□ -1.95
RTF1-204ENST00000558117 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 MT2AP02795 61 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 ANGP03950 147 aaKnown RBP2.89□□□□□ -1.95
RTF1-204ENST00000558117 SPINK8P0C7L1 97 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 ZNF22P17026 224 aaPredicted RBP2.89□□□□□ -1.95
RTF1-204ENST00000558117 TMEM170BQ5T4T1 132 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 LINC00269Q8N2A0 174 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 AMELXQ99217 191 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
RTF1-204ENST00000558117 IGKV2D-26A0A0A0MRZ7 120 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 F8VRH5 84 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 TMEM256-PLSCR3K7ERE1 68 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 MRPS36P82909 103 aaKnown RBP2.88□□□□□ -1.95
RTF1-204ENST00000558117 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 C5orf38Q86SI9 138 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 C2orf88Q9BSF0 95 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 TIMM21Q9BVV7 248 aa2.88□□□□□ -1.95
RTF1-204ENST00000558117 LINC00959A0A1B0GUT2 108 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 H3BPC8 53 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 CCL25O15444 150 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 IGLC3P0DOY3 106 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 PLNP26678 52 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 PKIAP61925 76 aa2.87□□□□□ -1.95
RTF1-204ENST00000558117 UBE2BP63146 152 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 313.4 ms