RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 A4D1N5 150 aa6.27□□□□□ -1.41
SNX6-209ENST00000557265 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
SNX6-209ENST00000557265 SYS1-DBNDD2H3BUS1 97 aa6.26□□□□□ -1.41
SNX6-209ENST00000557265 MT2AP02795 61 aa6.26□□□□□ -1.41
SNX6-209ENST00000557265 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
SNX6-209ENST00000557265 TRBV7-7A0A0K0K1E9 115 aa6.25□□□□□ -1.41
SNX6-209ENST00000557265 Q96NJ1 140 aa6.25□□□□□ -1.41
SNX6-209ENST00000557265 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
SNX6-209ENST00000557265 Q6JHZ5 121 aa6.23□□□□□ -1.41
SNX6-209ENST00000557265 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
SNX6-209ENST00000557265 SMIM11BQ8TCY0 68 aa6.23□□□□□ -1.41
SNX6-209ENST00000557265 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
SNX6-209ENST00000557265 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
SNX6-209ENST00000557265 IFITM1P13164 125 aa6.22□□□□□ -1.41
SNX6-209ENST00000557265 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
SNX6-209ENST00000557265 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
SNX6-209ENST00000557265 MT1FP04733 61 aa6.21□□□□□ -1.42
SNX6-209ENST00000557265 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
SNX6-209ENST00000557265 PET117Q6UWS5 81 aa6.2□□□□□ -1.42
SNX6-209ENST00000557265 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
SNX6-209ENST00000557265 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
SNX6-209ENST00000557265 LST1O00453 97 aa6.19□□□□□ -1.42
SNX6-209ENST00000557265 OCIAD2Q56VL3 154 aa6.19□□□□□ -1.42
SNX6-209ENST00000557265 Q6ZQY7 126 aa6.19□□□□□ -1.42
SNX6-209ENST00000557265 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
SNX6-209ENST00000557265 A8MUU9 505 aa6.18□□□□□ -1.42
SNX6-209ENST00000557265 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
SNX6-209ENST00000557265 VAMP3Q15836 100 aa6.18□□□□□ -1.42
SNX6-209ENST00000557265 LINC00575Q6W349 94 aa6.18□□□□□ -1.42
SNX6-209ENST00000557265 C3orf79P0CE67 100 aa6.17□□□□□ -1.42
SNX6-209ENST00000557265 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
SNX6-209ENST00000557265 Q6ZVH6 145 aa6.17□□□□□ -1.42
SNX6-209ENST00000557265 hADV29S1A0JD25 119 aa6.16□□□□□ -1.42
SNX6-209ENST00000557265 KRTDAPP60985 99 aa6.16□□□□□ -1.42
SNX6-209ENST00000557265 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
SNX6-209ENST00000557265 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
SNX6-209ENST00000557265 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
SNX6-209ENST00000557265 H3BUT2 72 aa6.13□□□□□ -1.43
SNX6-209ENST00000557265 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
SNX6-209ENST00000557265 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
SNX6-209ENST00000557265 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
SNX6-209ENST00000557265 S100A1P23297 94 aa6.11□□□□□ -1.43
SNX6-209ENST00000557265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.1□□□□□ -1.43
SNX6-209ENST00000557265 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
SNX6-209ENST00000557265 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
SNX6-209ENST00000557265 DSCR10P59022 87 aa6.09□□□□□ -1.43
SNX6-209ENST00000557265 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
SNX6-209ENST00000557265 SCGB1D1O95968 90 aa6.08□□□□□ -1.44
SNX6-209ENST00000557265 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
SNX6-209ENST00000557265 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
SNX6-209ENST00000557265 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
SNX6-209ENST00000557265 HIST1H2BLQ99880 126 aa6.07□□□□□ -1.44
SNX6-209ENST00000557265 HRES1P13985 223 aa6.06□□□□□ -1.44
SNX6-209ENST00000557265 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
SNX6-209ENST00000557265 A0A087WSZ3 146 aa6.05□□□□□ -1.44
SNX6-209ENST00000557265 S100A2P29034 98 aa6.05□□□□□ -1.44
SNX6-209ENST00000557265 TEN1Q86WV5 123 aa6.05□□□□□ -1.44
SNX6-209ENST00000557265 S100A6P06703 90 aa6.03□□□□□ -1.44
SNX6-209ENST00000557265 BVES-AS1Q5T3Y7 98 aa6.03□□□□□ -1.44
SNX6-209ENST00000557265 LINC00313P59037 77 aa6.02□□□□□ -1.45
SNX6-209ENST00000557265 SNRPEP62304 92 aaKnown RBP6.02□□□□□ -1.45
SNX6-209ENST00000557265 SIGMAR1Q99720 223 aa6.02□□□□□ -1.45
SNX6-209ENST00000557265 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
SNX6-209ENST00000557265 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
SNX6-209ENST00000557265 C12orf57Q99622 126 aa6□□□□□ -1.45
SNX6-209ENST00000557265 NDUFV3P56181 108 aaKnown RBP5.99□□□□□ -1.45
SNX6-209ENST00000557265 NEBP20929 6669 aa5.97□□□□□ -1.45
SNX6-209ENST00000557265 HSBP1L1C9JCN9 74 aa5.96□□□□□ -1.46
SNX6-209ENST00000557265 H3BMG7 143 aa5.96□□□□□ -1.46
SNX6-209ENST00000557265 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
SNX6-209ENST00000557265 MTURNQ8N3F0 131 aa5.95□□□□□ -1.46
SNX6-209ENST00000557265 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
SNX6-209ENST00000557265 SNCGO76070 127 aa5.94□□□□□ -1.46
SNX6-209ENST00000557265 FAM218AQ96MZ4 157 aa5.93□□□□□ -1.46
SNX6-209ENST00000557265 IGHV6-1A0A0B4J1U7 121 aa5.91□□□□□ -1.46
SNX6-209ENST00000557265 FABP2P12104 132 aa5.91□□□□□ -1.46
SNX6-209ENST00000557265 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
SNX6-209ENST00000557265 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
SNX6-209ENST00000557265 A8MWP4 228 aa5.9□□□□□ -1.46
SNX6-209ENST00000557265 H0YGX0 51 aa5.9□□□□□ -1.46
SNX6-209ENST00000557265 COX8AP10176 69 aa5.9□□□□□ -1.46
SNX6-209ENST00000557265 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
SNX6-209ENST00000557265 PAM16Q9Y3D7 125 aa5.89□□□□□ -1.47
SNX6-209ENST00000557265 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
SNX6-209ENST00000557265 A6NJY4 79 aa5.88□□□□□ -1.47
SNX6-209ENST00000557265 SPINK7P58062 85 aa5.88□□□□□ -1.47
SNX6-209ENST00000557265 C14orf144Q96I85 54 aa5.88□□□□□ -1.47
SNX6-209ENST00000557265 GHRHP01286 108 aa5.87□□□□□ -1.47
SNX6-209ENST00000557265 SPATA45Q537H7 98 aa5.87□□□□□ -1.47
SNX6-209ENST00000557265 RAB37Q96AX2 223 aa5.87□□□□□ -1.47
SNX6-209ENST00000557265 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
SNX6-209ENST00000557265 ANKRD29Q8N6D5 301 aa5.86□□□□□ -1.47
SNX6-209ENST00000557265 VAMP8Q9BV40 100 aa5.86□□□□□ -1.47
SNX6-209ENST00000557265 DLEU1O43261 78 aa5.85□□□□□ -1.47
SNX6-209ENST00000557265 ZCCHC13Q8WW36 166 aaKnown RBP5.85□□□□□ -1.47
SNX6-209ENST00000557265 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
SNX6-209ENST00000557265 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms