RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 COX7BP24311 80 aa7.17□□□□□ -1.26
ACTN1-219ENST00000556432 HSBP1L1C9JCN9 74 aa7.15□□□□□ -1.26
ACTN1-219ENST00000556432 ELOF1P60002 83 aaKnown RBP7.15□□□□□ -1.26
ACTN1-219ENST00000556432 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
ACTN1-219ENST00000556432 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
ACTN1-219ENST00000556432 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
ACTN1-219ENST00000556432 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
ACTN1-219ENST00000556432 MACF1Q9UPN3 7388 aaKnown RBP7.13□□□□□ -1.27
ACTN1-219ENST00000556432 LCE2BO14633 110 aa7.13□□□□□ -1.27
ACTN1-219ENST00000556432 MT2AP02795 61 aa7.13□□□□□ -1.27
ACTN1-219ENST00000556432 C6orf99Q4VX62 202 aa7.13□□□□□ -1.27
ACTN1-219ENST00000556432 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
ACTN1-219ENST00000556432 TRBV20-1A0A075B6N2 111 aa7.12□□□□□ -1.27
ACTN1-219ENST00000556432 Q75L30 129 aa7.12□□□□□ -1.27
ACTN1-219ENST00000556432 PAM16Q9Y3D7 125 aa7.12□□□□□ -1.27
ACTN1-219ENST00000556432 MUSTN1Q8IVN3 82 aa7.11□□□□□ -1.27
ACTN1-219ENST00000556432 COX8AP10176 69 aa7.09□□□□□ -1.27
ACTN1-219ENST00000556432 SPATA45Q537H7 98 aa7.09□□□□□ -1.27
ACTN1-219ENST00000556432 LINC00846Q9NV44 126 aa7.09□□□□□ -1.27
ACTN1-219ENST00000556432 MT1FP04733 61 aa7.08□□□□□ -1.28
ACTN1-219ENST00000556432 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
ACTN1-219ENST00000556432 C14orf144Q96I85 54 aa7.08□□□□□ -1.28
ACTN1-219ENST00000556432 IFITM1P13164 125 aa7.07□□□□□ -1.28
ACTN1-219ENST00000556432 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
ACTN1-219ENST00000556432 VAMP8Q9BV40 100 aa7.07□□□□□ -1.28
ACTN1-219ENST00000556432 Q6ZVH6 145 aa7.06□□□□□ -1.28
ACTN1-219ENST00000556432 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
ACTN1-219ENST00000556432 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
ACTN1-219ENST00000556432 F8WEM9 126 aa7.05□□□□□ -1.28
ACTN1-219ENST00000556432 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
ACTN1-219ENST00000556432 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
ACTN1-219ENST00000556432 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
ACTN1-219ENST00000556432 Q96NJ1 140 aa7.04□□□□□ -1.28
ACTN1-219ENST00000556432 C12orf57Q99622 126 aa7.04□□□□□ -1.28
ACTN1-219ENST00000556432 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 A4D1N5 150 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 A6NDN8 102 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 A6NJY4 79 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 C2orf91Q6ZV80 131 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
ACTN1-219ENST00000556432 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.29
ACTN1-219ENST00000556432 DLEU1O43261 78 aa7.02□□□□□ -1.29
ACTN1-219ENST00000556432 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
ACTN1-219ENST00000556432 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
ACTN1-219ENST00000556432 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
ACTN1-219ENST00000556432 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
ACTN1-219ENST00000556432 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
ACTN1-219ENST00000556432 IGFL1Q6UW32 110 aa6.98□□□□□ -1.29
ACTN1-219ENST00000556432 NHP2Q9NX24 153 aaKnown RBP6.98□□□□□ -1.29
ACTN1-219ENST00000556432 HIGD1BQ9P298 99 aa6.97□□□□□ -1.29
ACTN1-219ENST00000556432 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
ACTN1-219ENST00000556432 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
ACTN1-219ENST00000556432 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
ACTN1-219ENST00000556432 Q6JHZ5 121 aa6.95□□□□□ -1.3
ACTN1-219ENST00000556432 LST1O00453 97 aa6.94□□□□□ -1.3
ACTN1-219ENST00000556432 FXYD2P54710 66 aa6.93□□□□□ -1.3
ACTN1-219ENST00000556432 A8MUU9 505 aa6.92□□□□□ -1.3
ACTN1-219ENST00000556432 CEND1Q8N111 149 aa6.92□□□□□ -1.3
ACTN1-219ENST00000556432 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
ACTN1-219ENST00000556432 RAB37Q96AX2 223 aa6.9□□□□□ -1.3
ACTN1-219ENST00000556432 A0A0B4J2C4 111 aa6.89□□□□□ -1.31
ACTN1-219ENST00000556432 K7ERJ3 54 aa6.89□□□□□ -1.31
ACTN1-219ENST00000556432 HSD52Q0P140 79 aa6.89□□□□□ -1.31
ACTN1-219ENST00000556432 UQCR10Q9UDW1 63 aa6.89□□□□□ -1.31
ACTN1-219ENST00000556432 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
ACTN1-219ENST00000556432 LINC00575Q6W349 94 aa6.87□□□□□ -1.31
ACTN1-219ENST00000556432 Q6ZQY7 126 aa6.87□□□□□ -1.31
ACTN1-219ENST00000556432 LOC105371267A0A1B0GV96 52 aa6.86□□□□□ -1.31
ACTN1-219ENST00000556432 VAMP3Q15836 100 aa6.86□□□□□ -1.31
ACTN1-219ENST00000556432 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
ACTN1-219ENST00000556432 SS18L2Q9UHA2 77 aa6.85□□□□□ -1.31
ACTN1-219ENST00000556432 DSCR10P59022 87 aa6.84□□□□□ -1.31
ACTN1-219ENST00000556432 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
ACTN1-219ENST00000556432 hADV29S1A0JD25 119 aa6.83□□□□□ -1.32
ACTN1-219ENST00000556432 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
ACTN1-219ENST00000556432 H3BUT2 72 aa6.82□□□□□ -1.32
ACTN1-219ENST00000556432 BVES-AS1Q5T3Y7 98 aa6.82□□□□□ -1.32
ACTN1-219ENST00000556432 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
ACTN1-219ENST00000556432 TRIAP1O43715 76 aa6.81□□□□□ -1.32
ACTN1-219ENST00000556432 HRES1P13985 223 aa6.81□□□□□ -1.32
ACTN1-219ENST00000556432 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
ACTN1-219ENST00000556432 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
ACTN1-219ENST00000556432 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
ACTN1-219ENST00000556432 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
ACTN1-219ENST00000556432 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
ACTN1-219ENST00000556432 PSMB2P49721 201 aa6.75□□□□□ -1.33
ACTN1-219ENST00000556432 NEBP20929 6669 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 A0A087WSZ3 146 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 H0YGX0 51 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 LINC00313P59037 77 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
ACTN1-219ENST00000556432 PPDPFLQ8WWR9 84 aa6.74□□□□□ -1.33
ACTN1-219ENST00000556432 KRTAP20-1Q3LI63 56 aa6.72□□□□□ -1.33
ACTN1-219ENST00000556432 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
ACTN1-219ENST00000556432 NAA38Q9BRA0 125 aaKnown RBP6.72□□□□□ -1.33
ACTN1-219ENST00000556432 A8MWP4 228 aa6.71□□□□□ -1.34
ACTN1-219ENST00000556432 TSTD3H0UI37 97 aa6.71□□□□□ -1.34
ACTN1-219ENST00000556432 M0R143 59 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms