RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CRYGAP11844 174 aa5.55□□□□□ -1.52
ACTN1-218ENST00000556343 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
ACTN1-218ENST00000556343 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
ACTN1-218ENST00000556343 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
ACTN1-218ENST00000556343 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
ACTN1-218ENST00000556343 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
ACTN1-218ENST00000556343 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
ACTN1-218ENST00000556343 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
ACTN1-218ENST00000556343 Q6JHZ5 121 aa5.53□□□□□ -1.52
ACTN1-218ENST00000556343 DSCR8Q96T75 97 aa5.53□□□□□ -1.52
ACTN1-218ENST00000556343 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
ACTN1-218ENST00000556343 IGLV9-49A0A0B4J1Y8 123 aa5.52□□□□□ -1.53
ACTN1-218ENST00000556343 PDE6GP18545 87 aa5.52□□□□□ -1.53
ACTN1-218ENST00000556343 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
ACTN1-218ENST00000556343 SMCPP49901 116 aaPredicted RBP5.51□□□□□ -1.53
ACTN1-218ENST00000556343 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
ACTN1-218ENST00000556343 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
ACTN1-218ENST00000556343 IGLV8-61A0A075B6I0 122 aa5.5□□□□□ -1.53
ACTN1-218ENST00000556343 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
ACTN1-218ENST00000556343 Q8NBF4 154 aa5.5□□□□□ -1.53
ACTN1-218ENST00000556343 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
ACTN1-218ENST00000556343 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
ACTN1-218ENST00000556343 ETDBQ3ZM63 59 aa5.49□□□□□ -1.53
ACTN1-218ENST00000556343 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
ACTN1-218ENST00000556343 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 A0A1B0GV72 72 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 MOBPQ13875 183 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 C4orf48Q5BLP8 95 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 OBSCN-AS1Q96MR7 158 aa5.48□□□□□ -1.53
ACTN1-218ENST00000556343 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
ACTN1-218ENST00000556343 J3QR89 54 aa5.47□□□□□ -1.53
ACTN1-218ENST00000556343 LOC110117498A0A087WWA1 95 aa5.46□□□□□ -1.54
ACTN1-218ENST00000556343 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
ACTN1-218ENST00000556343 A0A087X002 238 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 A0A1B0GW54 56 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 OXTP01178 125 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 SPAG11AQ6PDA7 123 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
ACTN1-218ENST00000556343 CCKP06307 115 aa5.44□□□□□ -1.54
ACTN1-218ENST00000556343 CD164Q04900 197 aa5.44□□□□□ -1.54
ACTN1-218ENST00000556343 Q6ZQT0 140 aa5.44□□□□□ -1.54
ACTN1-218ENST00000556343 VPS25Q9BRG1 176 aa5.44□□□□□ -1.54
ACTN1-218ENST00000556343 KRTAP13-2Q52LG2 175 aa5.43□□□□□ -1.54
ACTN1-218ENST00000556343 Q6Q795 121 aa5.42□□□□□ -1.54
ACTN1-218ENST00000556343 ACYP1P07311 99 aa5.41□□□□□ -1.54
ACTN1-218ENST00000556343 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
ACTN1-218ENST00000556343 HERC2O95714 4834 aa5.41□□□□□ -1.54
ACTN1-218ENST00000556343 SPINK1P00995 79 aa5.4□□□□□ -1.54
ACTN1-218ENST00000556343 HRCT1Q6UXD1 115 aa5.4□□□□□ -1.54
ACTN1-218ENST00000556343 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
ACTN1-218ENST00000556343 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.54
ACTN1-218ENST00000556343 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.54
ACTN1-218ENST00000556343 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
ACTN1-218ENST00000556343 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
ACTN1-218ENST00000556343 K7ERU9 68 aa5.39□□□□□ -1.55
ACTN1-218ENST00000556343 KRTAP10-8P60410 259 aa5.39□□□□□ -1.55
ACTN1-218ENST00000556343 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
ACTN1-218ENST00000556343 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
ACTN1-218ENST00000556343 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
ACTN1-218ENST00000556343 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
ACTN1-218ENST00000556343 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
ACTN1-218ENST00000556343 UBL5Q9BZL1 73 aa5.37□□□□□ -1.55
ACTN1-218ENST00000556343 FAT3Q8TDW7 4589 aa5.36□□□□□ -1.55
ACTN1-218ENST00000556343 A0A087WSZ3 146 aa5.36□□□□□ -1.55
ACTN1-218ENST00000556343 J3QL48 77 aa5.36□□□□□ -1.55
ACTN1-218ENST00000556343 NREPQ16612 68 aa5.36□□□□□ -1.55
ACTN1-218ENST00000556343 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
ACTN1-218ENST00000556343 Q5XG85 94 aa5.35□□□□□ -1.55
ACTN1-218ENST00000556343 TNXBP22105 4242 aa5.32□□□□□ -1.56
ACTN1-218ENST00000556343 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
ACTN1-218ENST00000556343 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
ACTN1-218ENST00000556343 J3KT08 172 aa5.31□□□□□ -1.56
ACTN1-218ENST00000556343 LINC00846Q9NV44 126 aa5.31□□□□□ -1.56
ACTN1-218ENST00000556343 MYCBP2O75592 4640 aa5.3□□□□□ -1.56
ACTN1-218ENST00000556343 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
ACTN1-218ENST00000556343 BPY2O14599 106 aa5.29□□□□□ -1.56
ACTN1-218ENST00000556343 Q6ZVQ6 151 aa5.29□□□□□ -1.56
ACTN1-218ENST00000556343 LINC00643Q86TS7 51 aa5.28□□□□□ -1.56
ACTN1-218ENST00000556343 SIGMAR1Q99720 223 aa5.28□□□□□ -1.56
ACTN1-218ENST00000556343 NDUFB1O75438 58 aa5.27□□□□□ -1.57
ACTN1-218ENST00000556343 IGKV4-1P06312 121 aa5.27□□□□□ -1.57
ACTN1-218ENST00000556343 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
ACTN1-218ENST00000556343 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
ACTN1-218ENST00000556343 DMBT1Q9UGM3 2413 aaPredicted RBP5.26□□□□□ -1.57
ACTN1-218ENST00000556343 ABCA13Q86UQ4 5058 aa5.26□□□□□ -1.57
ACTN1-218ENST00000556343 CXCL6P80162 114 aa5.25□□□□□ -1.57
ACTN1-218ENST00000556343 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
ACTN1-218ENST00000556343 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
ACTN1-218ENST00000556343 DEFB116Q30KQ4 102 aa5.23□□□□□ -1.57
ACTN1-218ENST00000556343 A8MWP4 228 aa5.22□□□□□ -1.57
ACTN1-218ENST00000556343 Q96NJ1 140 aa5.22□□□□□ -1.57
ACTN1-218ENST00000556343 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
ACTN1-218ENST00000556343 IGKV3D-7A0A0C4DH55 119 aa5.21□□□□□ -1.58
ACTN1-218ENST00000556343 PRR4Q16378 134 aa5.2□□□□□ -1.58
ACTN1-218ENST00000556343 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
ACTN1-218ENST00000556343 PRR15Q8IV56 129 aa5.19□□□□□ -1.58
ACTN1-218ENST00000556343 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms