RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
SLIRP-205ENST00000556310 VAMP8Q9BV40 100 aa6.56□□□□□ -1.36
SLIRP-205ENST00000556310 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
SLIRP-205ENST00000556310 LAMTOR3Q9UHA4 124 aa6.56□□□□□ -1.36
SLIRP-205ENST00000556310 PAM16Q9Y3D7 125 aa6.56□□□□□ -1.36
SLIRP-205ENST00000556310 TAL2Q16559 108 aa6.55□□□□□ -1.36
SLIRP-205ENST00000556310 IGLV5-48A0A075B6I7 105 aa6.54□□□□□ -1.36
SLIRP-205ENST00000556310 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
SLIRP-205ENST00000556310 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
SLIRP-205ENST00000556310 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-205ENST00000556310 VAMP3Q15836 100 aa6.53□□□□□ -1.36
SLIRP-205ENST00000556310 Q8N377 158 aa6.53□□□□□ -1.36
SLIRP-205ENST00000556310 DEFB105AQ8NG35 78 aa6.53□□□□□ -1.36
SLIRP-205ENST00000556310 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
SLIRP-205ENST00000556310 SLC25A20O43772 301 aa6.52□□□□□ -1.37
SLIRP-205ENST00000556310 Q1RN00 199 aa6.52□□□□□ -1.37
SLIRP-205ENST00000556310 C12orf57Q99622 126 aa6.52□□□□□ -1.37
SLIRP-205ENST00000556310 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
SLIRP-205ENST00000556310 SMIM29Q86T20 159 aa6.51□□□□□ -1.37
SLIRP-205ENST00000556310 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
SLIRP-205ENST00000556310 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
SLIRP-205ENST00000556310 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
SLIRP-205ENST00000556310 LIMD2Q9BT23 127 aa6.49□□□□□ -1.37
SLIRP-205ENST00000556310 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
SLIRP-205ENST00000556310 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
SLIRP-205ENST00000556310 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
SLIRP-205ENST00000556310 MUC2Q02817 5179 aa6.48□□□□□ -1.37
SLIRP-205ENST00000556310 A0A0B4J2C4 111 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 hADV29S1A0JD25 119 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 CFC1P0CG37 223 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 CD164Q04900 197 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 Q6ZQY7 126 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
SLIRP-205ENST00000556310 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
SLIRP-205ENST00000556310 HRCT1Q6UXD1 115 aa6.46□□□□□ -1.38
SLIRP-205ENST00000556310 H7C2G1 150 aa6.45□□□□□ -1.38
SLIRP-205ENST00000556310 CEND1Q8N111 149 aa6.45□□□□□ -1.38
SLIRP-205ENST00000556310 F8WEM9 126 aa6.44□□□□□ -1.38
SLIRP-205ENST00000556310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-205ENST00000556310 PPDPFLQ8WWR9 84 aa6.43□□□□□ -1.38
SLIRP-205ENST00000556310 FXYD2P54710 66 aa6.42□□□□□ -1.38
SLIRP-205ENST00000556310 Q5XG85 94 aa6.42□□□□□ -1.38
SLIRP-205ENST00000556310 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
SLIRP-205ENST00000556310 HSD52Q0P140 79 aa6.41□□□□□ -1.38
SLIRP-205ENST00000556310 PRO1854Q9UHT4 67 aa6.41□□□□□ -1.38
SLIRP-205ENST00000556310 IGLV8-61A0A075B6I0 122 aa6.4□□□□□ -1.38
SLIRP-205ENST00000556310 A0A0G2JQZ4 141 aa6.4□□□□□ -1.38
SLIRP-205ENST00000556310 H0YGX0 51 aa6.4□□□□□ -1.38
SLIRP-205ENST00000556310 SNCGO76070 127 aa6.39□□□□□ -1.39
SLIRP-205ENST00000556310 Q6JHZ5 121 aa6.39□□□□□ -1.39
SLIRP-205ENST00000556310 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
SLIRP-205ENST00000556310 A0A0U1RQV1 116 aa6.38□□□□□ -1.39
SLIRP-205ENST00000556310 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
SLIRP-205ENST00000556310 CLEC2BQ92478 149 aa6.38□□□□□ -1.39
SLIRP-205ENST00000556310 UQCR10Q9UDW1 63 aa6.38□□□□□ -1.39
SLIRP-205ENST00000556310 A0A1B0GX51 115 aa6.37□□□□□ -1.39
SLIRP-205ENST00000556310 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
SLIRP-205ENST00000556310 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
SLIRP-205ENST00000556310 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
SLIRP-205ENST00000556310 SNHG12Q9BXW3 62 aa6.36□□□□□ -1.39
SLIRP-205ENST00000556310 TCL1BO95988 128 aa6.35□□□□□ -1.39
SLIRP-205ENST00000556310 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
SLIRP-205ENST00000556310 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
SLIRP-205ENST00000556310 C1orf195Q5TG92 126 aa6.35□□□□□ -1.39
SLIRP-205ENST00000556310 K7ERJ3 54 aa6.34□□□□□ -1.39
SLIRP-205ENST00000556310 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
SLIRP-205ENST00000556310 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
SLIRP-205ENST00000556310 H3BUT2 72 aa6.32□□□□□ -1.4
SLIRP-205ENST00000556310 C9orf92A6NGG3 77 aa6.31□□□□□ -1.4
SLIRP-205ENST00000556310 PSMB2P49721 201 aa6.31□□□□□ -1.4
SLIRP-205ENST00000556310 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
SLIRP-205ENST00000556310 DNAL4O96015 105 aa6.29□□□□□ -1.4
SLIRP-205ENST00000556310 COX6CP09669 75 aa6.29□□□□□ -1.4
SLIRP-205ENST00000556310 SMIM6P0DI80 62 aa6.28□□□□□ -1.4
SLIRP-205ENST00000556310 FABP2P12104 132 aa6.28□□□□□ -1.4
SLIRP-205ENST00000556310 Q6Q795 121 aa6.28□□□□□ -1.4
SLIRP-205ENST00000556310 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
SLIRP-205ENST00000556310 H3BMG7 143 aa6.26□□□□□ -1.41
SLIRP-205ENST00000556310 H3BQ85 93 aa6.26□□□□□ -1.41
SLIRP-205ENST00000556310 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
SLIRP-205ENST00000556310 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
SLIRP-205ENST00000556310 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
SLIRP-205ENST00000556310 LST1O00453 97 aa6.24□□□□□ -1.41
SLIRP-205ENST00000556310 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
SLIRP-205ENST00000556310 M0R143 59 aa6.23□□□□□ -1.41
SLIRP-205ENST00000556310 TRACP01848 142 aa6.23□□□□□ -1.41
SLIRP-205ENST00000556310 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
SLIRP-205ENST00000556310 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
SLIRP-205ENST00000556310 A0A087WSZ3 146 aa6.21□□□□□ -1.42
SLIRP-205ENST00000556310 SCGB1C2P0DMR2 95 aa6.21□□□□□ -1.42
SLIRP-205ENST00000556310 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
SLIRP-205ENST00000556310 A0A1W2PNM2 257 aa6.2□□□□□ -1.42
SLIRP-205ENST00000556310 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
SLIRP-205ENST00000556310 A0A1B0GV72 72 aa6.19□□□□□ -1.42
SLIRP-205ENST00000556310 PCP4P48539 62 aa6.19□□□□□ -1.42
SLIRP-205ENST00000556310 ANKRD29Q8N6D5 301 aa6.19□□□□□ -1.42
SLIRP-205ENST00000556310 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
SLIRP-205ENST00000556310 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
SLIRP-205ENST00000556310 OBSCN-AS1Q96MR7 158 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms