RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ANK3Q12955 4377 aaKnown RBP9.57□□□□□ -0.88
NEK9-209ENST00000556170 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
NEK9-209ENST00000556170 NUPR2A6NF83 97 aa9.56□□□□□ -0.88
NEK9-209ENST00000556170 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
NEK9-209ENST00000556170 NDUFB1O75438 58 aa9.55□□□□□ -0.88
NEK9-209ENST00000556170 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
NEK9-209ENST00000556170 Q8NBF4 154 aa9.55□□□□□ -0.88
NEK9-209ENST00000556170 A8MUN3 132 aa9.53□□□□□ -0.88
NEK9-209ENST00000556170 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
NEK9-209ENST00000556170 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
NEK9-209ENST00000556170 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.88
NEK9-209ENST00000556170 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.88
NEK9-209ENST00000556170 CD164Q04900 197 aa9.52□□□□□ -0.89
NEK9-209ENST00000556170 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
NEK9-209ENST00000556170 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
NEK9-209ENST00000556170 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
NEK9-209ENST00000556170 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
NEK9-209ENST00000556170 FAM229BQ4G0N7 80 aa9.48□□□□□ -0.89
NEK9-209ENST00000556170 K7EQZ3 153 aa9.47□□□□□ -0.89
NEK9-209ENST00000556170 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
NEK9-209ENST00000556170 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
NEK9-209ENST00000556170 IGFL1Q6UW32 110 aa9.44□□□□□ -0.9
NEK9-209ENST00000556170 IGLV5-52A0A0A0MRZ9 124 aa9.44□□□□□ -0.9
NEK9-209ENST00000556170 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
NEK9-209ENST00000556170 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
NEK9-209ENST00000556170 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
NEK9-209ENST00000556170 TRAV22A0A0B4J277 110 aa9.42□□□□□ -0.9
NEK9-209ENST00000556170 HCG22E2RYF7 251 aa9.42□□□□□ -0.9
NEK9-209ENST00000556170 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
NEK9-209ENST00000556170 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.9
NEK9-209ENST00000556170 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
NEK9-209ENST00000556170 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
NEK9-209ENST00000556170 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
NEK9-209ENST00000556170 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
NEK9-209ENST00000556170 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
NEK9-209ENST00000556170 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
NEK9-209ENST00000556170 LIMD2Q9BT23 127 aa9.37□□□□□ -0.91
NEK9-209ENST00000556170 RTL8CO15255 209 aa9.37□□□□□ -0.91
NEK9-209ENST00000556170 MOBPQ13875 183 aa9.36□□□□□ -0.91
NEK9-209ENST00000556170 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
NEK9-209ENST00000556170 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
NEK9-209ENST00000556170 SPRR1AP35321 89 aa9.33□□□□□ -0.92
NEK9-209ENST00000556170 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
NEK9-209ENST00000556170 KTN1-AS1Q86SY8 53 aa9.33□□□□□ -0.92
NEK9-209ENST00000556170 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
NEK9-209ENST00000556170 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
NEK9-209ENST00000556170 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
NEK9-209ENST00000556170 H0Y9P7 68 aa9.31□□□□□ -0.92
NEK9-209ENST00000556170 TGP01266 2768 aa9.31□□□□□ -0.92
NEK9-209ENST00000556170 A0A087WTM6 91 aa9.31□□□□□ -0.92
NEK9-209ENST00000556170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
NEK9-209ENST00000556170 A0A1B0GW54 56 aa9.3□□□□□ -0.92
NEK9-209ENST00000556170 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
NEK9-209ENST00000556170 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
NEK9-209ENST00000556170 DSCR10P59022 87 aa9.28□□□□□ -0.92
NEK9-209ENST00000556170 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
NEK9-209ENST00000556170 PANO1I0J062 215 aa9.27□□□□□ -0.93
NEK9-209ENST00000556170 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
NEK9-209ENST00000556170 OCR1Q9BZK8 76 aa9.24□□□□□ -0.93
NEK9-209ENST00000556170 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
NEK9-209ENST00000556170 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
NEK9-209ENST00000556170 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
NEK9-209ENST00000556170 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
NEK9-209ENST00000556170 Q1T7F1 81 aa9.22□□□□□ -0.93
NEK9-209ENST00000556170 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
NEK9-209ENST00000556170 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.93
NEK9-209ENST00000556170 TNP2Q05952 138 aa9.19□□□□□ -0.94
NEK9-209ENST00000556170 A8MWP4 228 aa9.19□□□□□ -0.94
NEK9-209ENST00000556170 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
NEK9-209ENST00000556170 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.95
NEK9-209ENST00000556170 ZNF861PO60384 105 aa9.14□□□□□ -0.95
NEK9-209ENST00000556170 LOC101927531A0A1B0GV80 90 aa9.12□□□□□ -0.95
NEK9-209ENST00000556170 LCA10Q71F78 164 aa9.12□□□□□ -0.95
NEK9-209ENST00000556170 COA5Q86WW8 74 aa9.12□□□□□ -0.95
NEK9-209ENST00000556170 H3BS24 57 aa9.12□□□□□ -0.95
NEK9-209ENST00000556170 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
NEK9-209ENST00000556170 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
NEK9-209ENST00000556170 Q5VV11 94 aa9.07□□□□□ -0.96
NEK9-209ENST00000556170 A8MU10 97 aa9.06□□□□□ -0.96
NEK9-209ENST00000556170 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
NEK9-209ENST00000556170 IGLV7-43P04211 117 aa9.04□□□□□ -0.96
NEK9-209ENST00000556170 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
NEK9-209ENST00000556170 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
NEK9-209ENST00000556170 COL7A1Q02388 2944 aa9.02□□□□□ -0.96
NEK9-209ENST00000556170 Q6ZRN7 208 aaPredicted RBP9.02□□□□□ -0.97
NEK9-209ENST00000556170 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.97
NEK9-209ENST00000556170 IGLV8-61A0A075B6I0 122 aa9.01□□□□□ -0.97
NEK9-209ENST00000556170 PRAC1Q96KF2 57 aa9.01□□□□□ -0.97
NEK9-209ENST00000556170 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
NEK9-209ENST00000556170 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
NEK9-209ENST00000556170 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
NEK9-209ENST00000556170 SPRR1BP22528 89 aa9□□□□□ -0.97
NEK9-209ENST00000556170 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
NEK9-209ENST00000556170 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
NEK9-209ENST00000556170 H3BPC8 53 aa8.98□□□□□ -0.97
NEK9-209ENST00000556170 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
NEK9-209ENST00000556170 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
NEK9-209ENST00000556170 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
NEK9-209ENST00000556170 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.97
NEK9-209ENST00000556170 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms