RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.3□□□□□ -1.08
SNX6-206ENST00000556162 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
SNX6-206ENST00000556162 A0A1B0GX51 115 aa8.28□□□□□ -1.08
SNX6-206ENST00000556162 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
SNX6-206ENST00000556162 MOBPQ13875 183 aa8.28□□□□□ -1.08
SNX6-206ENST00000556162 Q8N377 158 aa8.28□□□□□ -1.08
SNX6-206ENST00000556162 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
SNX6-206ENST00000556162 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
SNX6-206ENST00000556162 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SNX6-206ENST00000556162 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
SNX6-206ENST00000556162 GTF2H5Q6ZYL4 71 aa8.26□□□□□ -1.09
SNX6-206ENST00000556162 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
SNX6-206ENST00000556162 OCIAD2Q56VL3 154 aa8.25□□□□□ -1.09
SNX6-206ENST00000556162 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
SNX6-206ENST00000556162 Q8NBF4 154 aa8.25□□□□□ -1.09
SNX6-206ENST00000556162 GHRHP01286 108 aa8.23□□□□□ -1.09
SNX6-206ENST00000556162 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
SNX6-206ENST00000556162 DNAL4O96015 105 aa8.23□□□□□ -1.09
SNX6-206ENST00000556162 SPAG11AQ6PDA7 123 aa8.23□□□□□ -1.09
SNX6-206ENST00000556162 H3BUT2 72 aa8.22□□□□□ -1.09
SNX6-206ENST00000556162 K7EP34 96 aa8.21□□□□□ -1.09
SNX6-206ENST00000556162 NAA38Q9BRA0 125 aaKnown RBP8.21□□□□□ -1.09
SNX6-206ENST00000556162 F8WEM9 126 aa8.21□□□□□ -1.1
SNX6-206ENST00000556162 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
SNX6-206ENST00000556162 FABP2P12104 132 aa8.2□□□□□ -1.1
SNX6-206ENST00000556162 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
SNX6-206ENST00000556162 LST1O00453 97 aa8.19□□□□□ -1.1
SNX6-206ENST00000556162 TRACP01848 142 aa8.19□□□□□ -1.1
SNX6-206ENST00000556162 ORMDL1Q9P0S3 153 aa8.18□□□□□ -1.1
SNX6-206ENST00000556162 SPCS1Q9Y6A9 102 aa8.18□□□□□ -1.1
SNX6-206ENST00000556162 H3BQ85 93 aa8.17□□□□□ -1.1
SNX6-206ENST00000556162 SPINK1P00995 79 aa8.17□□□□□ -1.1
SNX6-206ENST00000556162 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
SNX6-206ENST00000556162 LCE2BO14633 110 aa8.17□□□□□ -1.1
SNX6-206ENST00000556162 K7ERU9 68 aa8.15□□□□□ -1.1
SNX6-206ENST00000556162 TCL1BO95988 128 aa8.15□□□□□ -1.1
SNX6-206ENST00000556162 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
SNX6-206ENST00000556162 TMEM256-PLSCR3K7ERE1 68 aa8.15□□□□□ -1.11
SNX6-206ENST00000556162 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.11
SNX6-206ENST00000556162 IGLV8-61A0A075B6I0 122 aa8.13□□□□□ -1.11
SNX6-206ENST00000556162 Q6JHZ5 121 aa8.13□□□□□ -1.11
SNX6-206ENST00000556162 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
SNX6-206ENST00000556162 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
SNX6-206ENST00000556162 RPS29P62273 56 aaKnown RBP8.12□□□□□ -1.11
SNX6-206ENST00000556162 CD164Q04900 197 aa8.12□□□□□ -1.11
SNX6-206ENST00000556162 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
SNX6-206ENST00000556162 H3BMG7 143 aa8.11□□□□□ -1.11
SNX6-206ENST00000556162 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
SNX6-206ENST00000556162 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
SNX6-206ENST00000556162 VPS25Q9BRG1 176 aa8.09□□□□□ -1.11
SNX6-206ENST00000556162 PRR4Q16378 134 aa8.09□□□□□ -1.12
SNX6-206ENST00000556162 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
SNX6-206ENST00000556162 LIMD2Q9BT23 127 aa8.07□□□□□ -1.12
SNX6-206ENST00000556162 F8W1H4 67 aa8.06□□□□□ -1.12
SNX6-206ENST00000556162 ANKRD29Q8N6D5 301 aa8.06□□□□□ -1.12
SNX6-206ENST00000556162 A0A1B0GV72 72 aa8.04□□□□□ -1.12
SNX6-206ENST00000556162 PCP4P48539 62 aa8.04□□□□□ -1.12
SNX6-206ENST00000556162 C9JAW5 83 aa8.04□□□□□ -1.12
SNX6-206ENST00000556162 J3QR89 54 aa8.02□□□□□ -1.13
SNX6-206ENST00000556162 Q5XG85 94 aa8.02□□□□□ -1.13
SNX6-206ENST00000556162 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
SNX6-206ENST00000556162 RBM3P98179 157 aaKnown RBP8.01□□□□□ -1.13
SNX6-206ENST00000556162 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
SNX6-206ENST00000556162 TEN1Q86WV5 123 aa8.01□□□□□ -1.13
SNX6-206ENST00000556162 LRP2P98164 4655 aa8□□□□□ -1.13
SNX6-206ENST00000556162 LPAP08519 4548 aa8□□□□□ -1.13
SNX6-206ENST00000556162 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SNX6-206ENST00000556162 C21orf62-AS1Q17RA5 79 aa8□□□□□ -1.13
SNX6-206ENST00000556162 Q6Q795 121 aa8□□□□□ -1.13
SNX6-206ENST00000556162 DSCR8Q96T75 97 aa7.99□□□□□ -1.13
SNX6-206ENST00000556162 JMJD7-PLA2G4BH0Y9G9 81 aa7.98□□□□□ -1.13
SNX6-206ENST00000556162 PRO0461Q9UI25 63 aa7.98□□□□□ -1.13
SNX6-206ENST00000556162 H3BT86 120 aa7.97□□□□□ -1.13
SNX6-206ENST00000556162 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.13
SNX6-206ENST00000556162 A0A1W2PNM2 257 aa7.96□□□□□ -1.13
SNX6-206ENST00000556162 MTURNQ8N3F0 131 aa7.96□□□□□ -1.13
SNX6-206ENST00000556162 CCKP06307 115 aa7.96□□□□□ -1.14
SNX6-206ENST00000556162 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
SNX6-206ENST00000556162 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
SNX6-206ENST00000556162 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
SNX6-206ENST00000556162 A0A087WSZ3 146 aa7.94□□□□□ -1.14
SNX6-206ENST00000556162 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
SNX6-206ENST00000556162 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
SNX6-206ENST00000556162 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
SNX6-206ENST00000556162 PDE6GP18545 87 aa7.91□□□□□ -1.14
SNX6-206ENST00000556162 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
SNX6-206ENST00000556162 LOC110117498A0A087WWA1 95 aa7.89□□□□□ -1.15
SNX6-206ENST00000556162 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
SNX6-206ENST00000556162 C14orf132Q9NPU4 83 aa7.89□□□□□ -1.15
SNX6-206ENST00000556162 Q6ZQT0 140 aa7.88□□□□□ -1.15
SNX6-206ENST00000556162 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
SNX6-206ENST00000556162 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
SNX6-206ENST00000556162 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
SNX6-206ENST00000556162 SCGB1A1P11684 91 aa7.86□□□□□ -1.15
SNX6-206ENST00000556162 A0A1B0GW54 56 aa7.84□□□□□ -1.15
SNX6-206ENST00000556162 Q96NJ1 140 aa7.81□□□□□ -1.16
SNX6-206ENST00000556162 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SNX6-206ENST00000556162 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
SNX6-206ENST00000556162 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
SNX6-206ENST00000556162 DEFB116Q30KQ4 102 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms