RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
MTHFD1-207ENST00000554677 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
MTHFD1-207ENST00000554677 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
MTHFD1-207ENST00000554677 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
MTHFD1-207ENST00000554677 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
MTHFD1-207ENST00000554677 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
MTHFD1-207ENST00000554677 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
MTHFD1-207ENST00000554677 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-207ENST00000554677 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
MTHFD1-207ENST00000554677 AKR1D1P51857 326 aa6.52□□□□□ -1.37
MTHFD1-207ENST00000554677 C3orf79P0CE67 100 aa6.51□□□□□ -1.37
MTHFD1-207ENST00000554677 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
MTHFD1-207ENST00000554677 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-207ENST00000554677 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-207ENST00000554677 IFITM1P13164 125 aa6.47□□□□□ -1.37
MTHFD1-207ENST00000554677 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
MTHFD1-207ENST00000554677 MTURNQ8N3F0 131 aa6.47□□□□□ -1.37
MTHFD1-207ENST00000554677 A6NDN8 102 aa6.45□□□□□ -1.38
MTHFD1-207ENST00000554677 SCGB1D4Q6XE38 83 aa6.45□□□□□ -1.38
MTHFD1-207ENST00000554677 KRTDAPP60985 99 aa6.44□□□□□ -1.38
MTHFD1-207ENST00000554677 Q6ZVH6 145 aa6.44□□□□□ -1.38
MTHFD1-207ENST00000554677 PCP2Q8IVA1 136 aa6.44□□□□□ -1.38
MTHFD1-207ENST00000554677 SMIM11BQ8TCY0 68 aa6.44□□□□□ -1.38
MTHFD1-207ENST00000554677 ATOH7Q8N100 152 aa6.42□□□□□ -1.38
MTHFD1-207ENST00000554677 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
MTHFD1-207ENST00000554677 M0R2T5 61 aa6.41□□□□□ -1.38
MTHFD1-207ENST00000554677 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.38
MTHFD1-207ENST00000554677 TCL1BO95988 128 aa6.4□□□□□ -1.38
MTHFD1-207ENST00000554677 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
MTHFD1-207ENST00000554677 COX6B2Q6YFQ2 88 aa6.39□□□□□ -1.39
MTHFD1-207ENST00000554677 NHP2Q9NX24 153 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-207ENST00000554677 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
MTHFD1-207ENST00000554677 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
MTHFD1-207ENST00000554677 C20orf202A1L168 122 aa6.36□□□□□ -1.39
MTHFD1-207ENST00000554677 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
MTHFD1-207ENST00000554677 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
MTHFD1-207ENST00000554677 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
MTHFD1-207ENST00000554677 Q6ZQY7 126 aa6.35□□□□□ -1.39
MTHFD1-207ENST00000554677 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
MTHFD1-207ENST00000554677 hADV29S1A0JD25 119 aa6.34□□□□□ -1.39
MTHFD1-207ENST00000554677 F8WEM9 126 aa6.34□□□□□ -1.39
MTHFD1-207ENST00000554677 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.39
MTHFD1-207ENST00000554677 Q6JHZ5 121 aa6.34□□□□□ -1.39
MTHFD1-207ENST00000554677 CLEC2BQ92478 149 aa6.33□□□□□ -1.4
MTHFD1-207ENST00000554677 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
MTHFD1-207ENST00000554677 S100A2P29034 98 aa6.3□□□□□ -1.4
MTHFD1-207ENST00000554677 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
MTHFD1-207ENST00000554677 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
MTHFD1-207ENST00000554677 Q6Q795 121 aa6.29□□□□□ -1.4
MTHFD1-207ENST00000554677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-207ENST00000554677 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
MTHFD1-207ENST00000554677 H3BUT2 72 aa6.27□□□□□ -1.41
MTHFD1-207ENST00000554677 USH2AO75445 5202 aa6.26□□□□□ -1.41
MTHFD1-207ENST00000554677 LST1O00453 97 aa6.26□□□□□ -1.41
MTHFD1-207ENST00000554677 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
MTHFD1-207ENST00000554677 Q96NJ1 140 aa6.26□□□□□ -1.41
MTHFD1-207ENST00000554677 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
MTHFD1-207ENST00000554677 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
MTHFD1-207ENST00000554677 C12orf57Q99622 126 aa6.25□□□□□ -1.41
MTHFD1-207ENST00000554677 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
MTHFD1-207ENST00000554677 A8MUU9 505 aa6.24□□□□□ -1.41
MTHFD1-207ENST00000554677 BVES-AS1Q5T3Y7 98 aa6.23□□□□□ -1.41
MTHFD1-207ENST00000554677 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-207ENST00000554677 CFC1P0CG37 223 aa6.2□□□□□ -1.42
MTHFD1-207ENST00000554677 HIST1H4GQ99525 98 aa6.2□□□□□ -1.42
MTHFD1-207ENST00000554677 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
MTHFD1-207ENST00000554677 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
MTHFD1-207ENST00000554677 COX8AP10176 69 aa6.18□□□□□ -1.42
MTHFD1-207ENST00000554677 NDUFV3P56181 108 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-207ENST00000554677 SS18L2Q9UHA2 77 aa6.18□□□□□ -1.42
MTHFD1-207ENST00000554677 A0A087WSZ3 146 aa6.16□□□□□ -1.42
MTHFD1-207ENST00000554677 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
MTHFD1-207ENST00000554677 DSCR10P59022 87 aa6.16□□□□□ -1.42
MTHFD1-207ENST00000554677 H0YGX0 51 aa6.15□□□□□ -1.42
MTHFD1-207ENST00000554677 DLEU1O43261 78 aa6.15□□□□□ -1.42
MTHFD1-207ENST00000554677 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.43
MTHFD1-207ENST00000554677 A0A1W2PNM2 257 aa6.14□□□□□ -1.43
MTHFD1-207ENST00000554677 MT2AP02795 61 aa6.14□□□□□ -1.43
MTHFD1-207ENST00000554677 TRBV20-1A0A075B6N2 111 aa6.13□□□□□ -1.43
MTHFD1-207ENST00000554677 H3BMG7 143 aa6.13□□□□□ -1.43
MTHFD1-207ENST00000554677 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
MTHFD1-207ENST00000554677 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
MTHFD1-207ENST00000554677 RAB37Q96AX2 223 aa6.12□□□□□ -1.43
MTHFD1-207ENST00000554677 FAM240AA0A1B0GVK7 77 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 HIGD1BQ9P298 99 aa6.11□□□□□ -1.43
MTHFD1-207ENST00000554677 MT1FP04733 61 aa6.1□□□□□ -1.43
MTHFD1-207ENST00000554677 LINC00313P59037 77 aa6.1□□□□□ -1.43
MTHFD1-207ENST00000554677 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
MTHFD1-207ENST00000554677 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
MTHFD1-207ENST00000554677 A0A1B0GX51 115 aa6.09□□□□□ -1.43
MTHFD1-207ENST00000554677 SNCGO76070 127 aa6.09□□□□□ -1.43
MTHFD1-207ENST00000554677 HRES1P13985 223 aa6.09□□□□□ -1.43
MTHFD1-207ENST00000554677 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
MTHFD1-207ENST00000554677 FABP2P12104 132 aa6.08□□□□□ -1.44
MTHFD1-207ENST00000554677 SIGMAR1Q99720 223 aa6.07□□□□□ -1.44
MTHFD1-207ENST00000554677 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms