RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
NEK9-204ENST00000554258 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
NEK9-204ENST00000554258 LINC00483Q53H64 154 aa9.62□□□□□ -0.87
NEK9-204ENST00000554258 SNHG12Q9BXW3 62 aa9.62□□□□□ -0.87
NEK9-204ENST00000554258 BATFQ16520 125 aa9.61□□□□□ -0.87
NEK9-204ENST00000554258 FAM229BQ4G0N7 80 aa9.61□□□□□ -0.87
NEK9-204ENST00000554258 LINC00304Q8N9R0 145 aa9.61□□□□□ -0.87
NEK9-204ENST00000554258 hADV29S1A0JD25 119 aa9.6□□□□□ -0.87
NEK9-204ENST00000554258 SLC25A20O43772 301 aa9.6□□□□□ -0.87
NEK9-204ENST00000554258 SPRR1BP22528 89 aa9.6□□□□□ -0.87
NEK9-204ENST00000554258 ST20-AS1Q8NBB2 130 aa9.6□□□□□ -0.87
NEK9-204ENST00000554258 A0A1B0GX51 115 aa9.59□□□□□ -0.87
NEK9-204ENST00000554258 PSMB2P49721 201 aa9.59□□□□□ -0.87
NEK9-204ENST00000554258 FAM218AQ96MZ4 157 aa9.59□□□□□ -0.87
NEK9-204ENST00000554258 USH2AO75445 5202 aa9.59□□□□□ -0.88
NEK9-204ENST00000554258 SYNE2Q8WXH0 6885 aaKnown RBP9.58□□□□□ -0.88
NEK9-204ENST00000554258 PCP4L1A6NKN8 68 aa9.58□□□□□ -0.88
NEK9-204ENST00000554258 COX6CP09669 75 aa9.58□□□□□ -0.88
NEK9-204ENST00000554258 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
NEK9-204ENST00000554258 FCGBPQ9Y6R7 5405 aaPredicted RBP9.57□□□□□ -0.88
NEK9-204ENST00000554258 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
NEK9-204ENST00000554258 TAX1BP3O14907 124 aa9.56□□□□□ -0.88
NEK9-204ENST00000554258 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
NEK9-204ENST00000554258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.56□□□□□ -0.88
NEK9-204ENST00000554258 KRTAP19-2Q3LHN2 52 aa9.55□□□□□ -0.88
NEK9-204ENST00000554258 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
NEK9-204ENST00000554258 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
NEK9-204ENST00000554258 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
NEK9-204ENST00000554258 TEX49A0A1B0GTD5 131 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 SNCGO76070 127 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 Q6ZQY7 126 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 Q8N377 158 aa9.53□□□□□ -0.88
NEK9-204ENST00000554258 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.89
NEK9-204ENST00000554258 COL5A1-AS1Q5SY13 56 aa9.52□□□□□ -0.89
NEK9-204ENST00000554258 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
NEK9-204ENST00000554258 LST1O00453 97 aa9.51□□□□□ -0.89
NEK9-204ENST00000554258 SMIM29Q86T20 159 aa9.51□□□□□ -0.89
NEK9-204ENST00000554258 M0R2T5 61 aa9.5□□□□□ -0.89
NEK9-204ENST00000554258 TRACP01848 142 aa9.5□□□□□ -0.89
NEK9-204ENST00000554258 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
NEK9-204ENST00000554258 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
NEK9-204ENST00000554258 H3BUT2 72 aa9.49□□□□□ -0.89
NEK9-204ENST00000554258 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
NEK9-204ENST00000554258 DEFB105AQ8NG35 78 aa9.49□□□□□ -0.89
NEK9-204ENST00000554258 C3orf22Q8N5N4 141 aa9.48□□□□□ -0.89
NEK9-204ENST00000554258 TCL1BO95988 128 aa9.46□□□□□ -0.9
NEK9-204ENST00000554258 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.9
NEK9-204ENST00000554258 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
NEK9-204ENST00000554258 A0A1W2PPM0 123 aa9.45□□□□□ -0.9
NEK9-204ENST00000554258 SSBP3-AS1Q7Z2R9 100 aa9.45□□□□□ -0.9
NEK9-204ENST00000554258 TRBV20-1A0A075B6N2 111 aa9.44□□□□□ -0.9
NEK9-204ENST00000554258 GHRHP01286 108 aa9.44□□□□□ -0.9
NEK9-204ENST00000554258 H3BQ85 93 aa9.43□□□□□ -0.9
NEK9-204ENST00000554258 DNAL4O96015 105 aa9.43□□□□□ -0.9
NEK9-204ENST00000554258 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
NEK9-204ENST00000554258 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
NEK9-204ENST00000554258 IGLV9-49A0A0B4J1Y8 123 aa9.41□□□□□ -0.9
NEK9-204ENST00000554258 FABP2P12104 132 aa9.41□□□□□ -0.9
NEK9-204ENST00000554258 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
NEK9-204ENST00000554258 MOBPQ13875 183 aa9.4□□□□□ -0.9
NEK9-204ENST00000554258 Q8NBF4 154 aa9.4□□□□□ -0.9
NEK9-204ENST00000554258 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
NEK9-204ENST00000554258 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
NEK9-204ENST00000554258 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
NEK9-204ENST00000554258 UBE2V1Q13404 147 aa9.36□□□□□ -0.91
NEK9-204ENST00000554258 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
NEK9-204ENST00000554258 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
NEK9-204ENST00000554258 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
NEK9-204ENST00000554258 F8WEM9 126 aa9.34□□□□□ -0.91
NEK9-204ENST00000554258 Q6JHZ5 121 aa9.33□□□□□ -0.92
NEK9-204ENST00000554258 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
NEK9-204ENST00000554258 H3BMG7 143 aa9.32□□□□□ -0.92
NEK9-204ENST00000554258 CD164Q04900 197 aa9.31□□□□□ -0.92
NEK9-204ENST00000554258 C9JAW5 83 aa9.3□□□□□ -0.92
NEK9-204ENST00000554258 K7EP34 96 aa9.3□□□□□ -0.92
NEK9-204ENST00000554258 SPINK1P00995 79 aa9.3□□□□□ -0.92
NEK9-204ENST00000554258 XP32Q5T750 250 aa9.3□□□□□ -0.92
NEK9-204ENST00000554258 RPS29P62273 56 aaKnown RBP9.29□□□□□ -0.92
NEK9-204ENST00000554258 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
NEK9-204ENST00000554258 IGFL1Q6UW32 110 aa9.29□□□□□ -0.92
NEK9-204ENST00000554258 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
NEK9-204ENST00000554258 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
NEK9-204ENST00000554258 H3BT86 120 aa9.27□□□□□ -0.93
NEK9-204ENST00000554258 PRO0461Q9UI25 63 aa9.24□□□□□ -0.93
NEK9-204ENST00000554258 Q5XG85 94 aa9.23□□□□□ -0.93
NEK9-204ENST00000554258 Q6Q795 121 aa9.23□□□□□ -0.93
NEK9-204ENST00000554258 GTF2H5Q6ZYL4 71 aa9.23□□□□□ -0.93
NEK9-204ENST00000554258 KRTAP19-1Q8IUB9 90 aa9.23□□□□□ -0.93
NEK9-204ENST00000554258 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
NEK9-204ENST00000554258 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
NEK9-204ENST00000554258 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
NEK9-204ENST00000554258 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
NEK9-204ENST00000554258 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.94
NEK9-204ENST00000554258 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
NEK9-204ENST00000554258 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
NEK9-204ENST00000554258 HRCT1Q6UXD1 115 aa9.2□□□□□ -0.94
NEK9-204ENST00000554258 TEN1Q86WV5 123 aa9.2□□□□□ -0.94
NEK9-204ENST00000554258 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms