RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RNF213Q63HN8 5207 aa13.15□□□□□ -0.3
NEK9-203ENST00000553945 H0YGX0 51 aa13.15□□□□□ -0.3
NEK9-203ENST00000553945 TPRXLQ17RH7 258 aa13.14□□□□□ -0.31
NEK9-203ENST00000553945 F8WEM9 126 aa13.13□□□□□ -0.31
NEK9-203ENST00000553945 SNCGO76070 127 aa13.12□□□□□ -0.31
NEK9-203ENST00000553945 A0A0G2JQZ4 141 aa13.11□□□□□ -0.31
NEK9-203ENST00000553945 K7ERJ3 54 aa13.11□□□□□ -0.31
NEK9-203ENST00000553945 CD164Q04900 197 aa13.11□□□□□ -0.31
NEK9-203ENST00000553945 LIMD2Q9BT23 127 aa13.11□□□□□ -0.31
NEK9-203ENST00000553945 FAM218AQ96MZ4 157 aa13.1□□□□□ -0.31
NEK9-203ENST00000553945 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
NEK9-203ENST00000553945 TRIAP1O43715 76 aa13.07□□□□□ -0.32
NEK9-203ENST00000553945 SMIM6P0DI80 62 aa13.07□□□□□ -0.32
NEK9-203ENST00000553945 PPDPFLQ8WWR9 84 aa13.07□□□□□ -0.32
NEK9-203ENST00000553945 SNHG12Q9BXW3 62 aa13.06□□□□□ -0.32
NEK9-203ENST00000553945 PSMB2P49721 201 aa13.05□□□□□ -0.32
NEK9-203ENST00000553945 OCIAD2Q56VL3 154 aa13.03□□□□□ -0.32
NEK9-203ENST00000553945 KRTAP13-3Q3SY46 172 aa13.02□□□□□ -0.33
NEK9-203ENST00000553945 A0A1B0GX51 115 aa13.01□□□□□ -0.33
NEK9-203ENST00000553945 IGLV8-61A0A075B6I0 122 aa13□□□□□ -0.33
NEK9-203ENST00000553945 Q6JHZ5 121 aa13□□□□□ -0.33
NEK9-203ENST00000553945 CLEC2BQ92478 149 aa13□□□□□ -0.33
NEK9-203ENST00000553945 COX6CP09669 75 aa12.97□□□□□ -0.33
NEK9-203ENST00000553945 IGFL1Q6UW32 110 aa12.97□□□□□ -0.33
NEK9-203ENST00000553945 LOC105371267A0A1B0GV96 52 aa12.95□□□□□ -0.34
NEK9-203ENST00000553945 H3BUT2 72 aa12.95□□□□□ -0.34
NEK9-203ENST00000553945 Q5XG85 94 aa12.95□□□□□ -0.34
NEK9-203ENST00000553945 GHRHP01286 108 aa12.94□□□□□ -0.34
NEK9-203ENST00000553945 FABP2P12104 132 aa12.93□□□□□ -0.34
NEK9-203ENST00000553945 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
NEK9-203ENST00000553945 M0R143 59 aa12.92□□□□□ -0.34
NEK9-203ENST00000553945 DNAL4O96015 105 aa12.92□□□□□ -0.34
NEK9-203ENST00000553945 MUC17Q685J3 4493 aa12.92□□□□□ -0.34
NEK9-203ENST00000553945 TCL1BO95988 128 aa12.91□□□□□ -0.34
NEK9-203ENST00000553945 C1orf195Q5TG92 126 aa12.89□□□□□ -0.35
NEK9-203ENST00000553945 TRBV7-7A0A0K0K1E9 115 aa12.88□□□□□ -0.35
NEK9-203ENST00000553945 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
NEK9-203ENST00000553945 TSTD3H0UI37 97 aa12.87□□□□□ -0.35
NEK9-203ENST00000553945 ORMDL1Q9P0S3 153 aa12.87□□□□□ -0.35
NEK9-203ENST00000553945 H3BMG7 143 aa12.85□□□□□ -0.35
NEK9-203ENST00000553945 MUC2Q02817 5179 aa12.84□□□□□ -0.35
NEK9-203ENST00000553945 H3BQ85 93 aa12.82□□□□□ -0.36
NEK9-203ENST00000553945 C9orf92A6NGG3 77 aa12.81□□□□□ -0.36
NEK9-203ENST00000553945 TMEM256-PLSCR3K7ERE1 68 aa12.79□□□□□ -0.36
NEK9-203ENST00000553945 LST1O00453 97 aa12.79□□□□□ -0.36
NEK9-203ENST00000553945 TRACP01848 142 aa12.79□□□□□ -0.36
NEK9-203ENST00000553945 ASB16-AS1Q495Z4 193 aa12.79□□□□□ -0.36
NEK9-203ENST00000553945 XP32Q5T750 250 aa12.79□□□□□ -0.36
NEK9-203ENST00000553945 A0A1B0GV72 72 aa12.77□□□□□ -0.37
NEK9-203ENST00000553945 TEN1Q86WV5 123 aa12.77□□□□□ -0.37
NEK9-203ENST00000553945 NAA38Q9BRA0 125 aaKnown RBP12.77□□□□□ -0.37
NEK9-203ENST00000553945 Q6Q795 121 aa12.76□□□□□ -0.37
NEK9-203ENST00000553945 BATFQ16520 125 aa12.75□□□□□ -0.37
NEK9-203ENST00000553945 SEC61BP60468 96 aaKnown RBP12.74□□□□□ -0.37
NEK9-203ENST00000553945 ANKRD29Q8N6D5 301 aa12.72□□□□□ -0.37
NEK9-203ENST00000553945 UBE2V1Q13404 147 aa12.71□□□□□ -0.37
NEK9-203ENST00000553945 SS18L2Q9UHA2 77 aa12.71□□□□□ -0.37
NEK9-203ENST00000553945 A0A087WSZ3 146 aa12.69□□□□□ -0.38
NEK9-203ENST00000553945 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
NEK9-203ENST00000553945 ATXN8Q156A1 80 aa12.67□□□□□ -0.38
NEK9-203ENST00000553945 BAALC-AS2P0C853 105 aa12.66□□□□□ -0.38
NEK9-203ENST00000553945 A0A0U1RQV1 116 aa12.65□□□□□ -0.38
NEK9-203ENST00000553945 TRBV7-4A0A0J9YYF1 115 aa12.61□□□□□ -0.39
NEK9-203ENST00000553945 LYRM7Q5U5X0 104 aa12.61□□□□□ -0.39
NEK9-203ENST00000553945 CCKP06307 115 aa12.6□□□□□ -0.39
NEK9-203ENST00000553945 RBM3P98179 157 aaKnown RBP12.59□□□□□ -0.39
NEK9-203ENST00000553945 DSCR8Q96T75 97 aa12.57□□□□□ -0.4
NEK9-203ENST00000553945 KRTAP4-1Q9BYQ7 146 aa12.57□□□□□ -0.4
NEK9-203ENST00000553945 PCOTHQ58A44 107 aa12.56□□□□□ -0.4
NEK9-203ENST00000553945 Q96NJ1 140 aa12.55□□□□□ -0.4
NEK9-203ENST00000553945 VPS25Q9BRG1 176 aa12.55□□□□□ -0.4
NEK9-203ENST00000553945 TRBV20-1A0A075B6N2 111 aa12.54□□□□□ -0.4
NEK9-203ENST00000553945 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
NEK9-203ENST00000553945 FAT4Q6V0I7 4981 aa12.53□□□□□ -0.4
NEK9-203ENST00000553945 TAX1BP3O14907 124 aa12.53□□□□□ -0.4
NEK9-203ENST00000553945 OBSCN-AS1Q96MR7 158 aa12.53□□□□□ -0.4
NEK9-203ENST00000553945 RPL37P61927 97 aaKnown RBP12.52□□□□□ -0.41
NEK9-203ENST00000553945 C9JAW5 83 aa12.5□□□□□ -0.41
NEK9-203ENST00000553945 SIGMAR1Q99720 223 aa12.49□□□□□ -0.41
NEK9-203ENST00000553945 A0A1W2PPM0 123 aa12.47□□□□□ -0.41
NEK9-203ENST00000553945 JMJD7-PLA2G4BH0Y9G9 81 aa12.47□□□□□ -0.41
NEK9-203ENST00000553945 IGKV4-1P06312 121 aa12.46□□□□□ -0.41
NEK9-203ENST00000553945 DEFB116Q30KQ4 102 aa12.43□□□□□ -0.42
NEK9-203ENST00000553945 LINC00472Q9H8W2 130 aa12.42□□□□□ -0.42
NEK9-203ENST00000553945 Q6ZQT0 140 aa12.4□□□□□ -0.42
NEK9-203ENST00000553945 DSCR10P59022 87 aa12.39□□□□□ -0.43
NEK9-203ENST00000553945 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
NEK9-203ENST00000553945 Q75L30 129 aa12.38□□□□□ -0.43
NEK9-203ENST00000553945 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
NEK9-203ENST00000553945 MTURNQ8N3F0 131 aa12.37□□□□□ -0.43
NEK9-203ENST00000553945 C14orf132Q9NPU4 83 aa12.37□□□□□ -0.43
NEK9-203ENST00000553945 COL5A1-AS1Q5SY13 56 aa12.36□□□□□ -0.43
NEK9-203ENST00000553945 PDE6GP18545 87 aa12.35□□□□□ -0.43
NEK9-203ENST00000553945 H3BT86 120 aa12.34□□□□□ -0.43
NEK9-203ENST00000553945 ATP11AUNQ6ZP68 121 aa12.33□□□□□ -0.44
NEK9-203ENST00000553945 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
NEK9-203ENST00000553945 LINC00313P59037 77 aa12.32□□□□□ -0.44
NEK9-203ENST00000553945 LCE2AQ5TA79 106 aaPredicted RBP12.31□□□□□ -0.44
NEK9-203ENST00000553945 C20orf166-AS1Q96NR2 134 aa12.31□□□□□ -0.44
NEK9-203ENST00000553945 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms