RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 ATP7AQ04656 1500 aa0.94□□□□□ -2.26
KTN1-210ENST00000553624 ZNF292O60281 2723 aa0.93□□□□□ -2.26
KTN1-210ENST00000553624 ABCA12Q86UK0 2595 aa0.93□□□□□ -2.26
KTN1-210ENST00000553624 SPTBN1Q01082 2364 aaKnown RBP0.93□□□□□ -2.26
KTN1-210ENST00000553624 FBN2P35556 2912 aa0.92□□□□□ -2.26
KTN1-210ENST00000553624 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
KTN1-210ENST00000553624 NOTCH1P46531 2555 aa0.92□□□□□ -2.26
KTN1-210ENST00000553624 ALMS1Q8TCU4 4167 aa0.91□□□□□ -2.26
KTN1-210ENST00000553624 KIF21BO75037 1637 aa0.91□□□□□ -2.26
KTN1-210ENST00000553624 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
KTN1-210ENST00000553624 SPINK1P00995 79 aa0.9□□□□□ -2.27
KTN1-210ENST00000553624 WT1-ASQ06250 92 aa0.9□□□□□ -2.27
KTN1-210ENST00000553624 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
KTN1-210ENST00000553624 F8P00451 2351 aa0.89□□□□□ -2.27
KTN1-210ENST00000553624 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
KTN1-210ENST00000553624 NFAT5O94916 1531 aa0.89□□□□□ -2.27
KTN1-210ENST00000553624 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
KTN1-210ENST00000553624 FRAS1Q86XX4 4008 aa0.88□□□□□ -2.27
KTN1-210ENST00000553624 GVINP1Q7Z2Y8 2422 aa0.88□□□□□ -2.27
KTN1-210ENST00000553624 REV3LO60673 3130 aa0.88□□□□□ -2.27
KTN1-210ENST00000553624 CSMD3Q7Z407 3707 aa0.88□□□□□ -2.27
KTN1-210ENST00000553624 TIMM8BQ9Y5J9 83 aaPredicted RBP0.87□□□□□ -2.27
KTN1-210ENST00000553624 TRPM2O94759 1503 aa0.86□□□□□ -2.27
KTN1-210ENST00000553624 SAMD9LQ8IVG5 1584 aa0.86□□□□□ -2.27
KTN1-210ENST00000553624 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
KTN1-210ENST00000553624 S4R3F8 94 aa0.85□□□□□ -2.27
KTN1-210ENST00000553624 U3KQA8 63 aa0.85□□□□□ -2.27
KTN1-210ENST00000553624 PKDREJQ9NTG1 2253 aa0.85□□□□□ -2.27
KTN1-210ENST00000553624 WNK2Q9Y3S1 2297 aa0.85□□□□□ -2.27
KTN1-210ENST00000553624 PIEZO1Q92508 2521 aa0.84□□□□□ -2.27
KTN1-210ENST00000553624 H3BUA1 57 aa0.84□□□□□ -2.27
KTN1-210ENST00000553624 SMIM2Q9BVW6 85 aa0.83□□□□□ -2.28
KTN1-210ENST00000553624 KNL1Q8NG31 2342 aa0.83□□□□□ -2.28
KTN1-210ENST00000553624 ANK2Q01484 3957 aa0.83□□□□□ -2.28
KTN1-210ENST00000553624 TPRP12270 2363 aaKnown RBP0.83□□□□□ -2.28
KTN1-210ENST00000553624 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
KTN1-210ENST00000553624 PRLHP81277 87 aa0.82□□□□□ -2.28
KTN1-210ENST00000553624 TFF3Q07654 80 aa0.82□□□□□ -2.28
KTN1-210ENST00000553624 VWFP04275 2813 aa0.81□□□□□ -2.28
KTN1-210ENST00000553624 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
KTN1-210ENST00000553624 M0R2T5 61 aa0.81□□□□□ -2.28
KTN1-210ENST00000553624 DEFB135Q30KP9 77 aa0.81□□□□□ -2.28
KTN1-210ENST00000553624 DEFB106AQ8N104 65 aa0.81□□□□□ -2.28
KTN1-210ENST00000553624 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
KTN1-210ENST00000553624 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
KTN1-210ENST00000553624 ABCA2Q9BZC7 2435 aa0.78□□□□□ -2.28
KTN1-210ENST00000553624 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
KTN1-210ENST00000553624 CLTCL1P53675 1640 aa0.77□□□□□ -2.29
KTN1-210ENST00000553624 NDUFA1O15239 70 aa0.76□□□□□ -2.29
KTN1-210ENST00000553624 PRM1P04553 51 aa0.76□□□□□ -2.29
KTN1-210ENST00000553624 APCP25054 2843 aa0.76□□□□□ -2.29
KTN1-210ENST00000553624 TNXBP22105 4242 aa0.75□□□□□ -2.29
KTN1-210ENST00000553624 PDE4DIPQ5VU43 2346 aa0.75□□□□□ -2.29
KTN1-210ENST00000553624 H0YGG7 62 aa0.75□□□□□ -2.29
KTN1-210ENST00000553624 CHD6Q8TD26 2715 aa0.75□□□□□ -2.29
KTN1-210ENST00000553624 TRANK1O15050 2925 aa0.75□□□□□ -2.29
KTN1-210ENST00000553624 PCNX1Q96RV3 2341 aa0.74□□□□□ -2.29
KTN1-210ENST00000553624 WFDC10BQ8IUB3 73 aa0.74□□□□□ -2.29
KTN1-210ENST00000553624 KAAG1Q9UBP8 84 aa0.74□□□□□ -2.29
KTN1-210ENST00000553624 DSPP15924 2871 aaKnown RBP0.74□□□□□ -2.29
KTN1-210ENST00000553624 OTOGQ6ZRI0 2925 aa0.73□□□□□ -2.29
KTN1-210ENST00000553624 ATRQ13535 2644 aa0.72□□□□□ -2.29
KTN1-210ENST00000553624 IGF2RP11717 2491 aa0.71□□□□□ -2.3
KTN1-210ENST00000553624 IGLV5-48A0A075B6I7 105 aa0.71□□□□□ -2.3
KTN1-210ENST00000553624 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
KTN1-210ENST00000553624 NOP10Q9NPE3 64 aaKnown RBP0.71□□□□□ -2.3
KTN1-210ENST00000553624 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
KTN1-210ENST00000553624 DEFB131AP59861 70 aa0.69□□□□□ -2.3
KTN1-210ENST00000553624 SPTA1P02549 2419 aa0.69□□□□□ -2.3
KTN1-210ENST00000553624 EP300Q09472 2414 aaPredicted RBP0.69□□□□□ -2.3
KTN1-210ENST00000553624 FAT2Q9NYQ8 4349 aa0.68□□□□□ -2.3
KTN1-210ENST00000553624 MMP24-AS1A0A0U1RRL7 71 aa0.68□□□□□ -2.3
KTN1-210ENST00000553624 DUOX1Q9NRD9 1551 aa0.68□□□□□ -2.3
KTN1-210ENST00000553624 NCOR1O75376 2440 aa0.68□□□□□ -2.3
KTN1-210ENST00000553624 PRKDCP78527 4128 aaKnown RBP0.67□□□□□ -2.3
KTN1-210ENST00000553624 BSNQ9UPA5 3926 aa0.67□□□□□ -2.3
KTN1-210ENST00000553624 AKAP13Q12802 2813 aa0.65□□□□□ -2.3
KTN1-210ENST00000553624 SPRR2DP22532 72 aa0.65□□□□□ -2.31
KTN1-210ENST00000553624 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
KTN1-210ENST00000553624 HUWE1Q7Z6Z7 4374 aaKnown RBP0.64□□□□□ -2.31
KTN1-210ENST00000553624 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
KTN1-210ENST00000553624 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
KTN1-210ENST00000553624 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
KTN1-210ENST00000553624 ZFYVE26Q68DK2 2539 aa0.63□□□□□ -2.31
KTN1-210ENST00000553624 MROH2BQ7Z745 1585 aa0.62□□□□□ -2.31
KTN1-210ENST00000553624 MACF1Q9UPN3 7388 aaKnown RBP0.62□□□□□ -2.31
KTN1-210ENST00000553624 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
KTN1-210ENST00000553624 SNRPGP62308 76 aaKnown RBP0.62□□□□□ -2.31
KTN1-210ENST00000553624 CHD8Q9HCK8 2581 aa0.61□□□□□ -2.31
KTN1-210ENST00000553624 USP24Q9UPU5 2620 aa0.61□□□□□ -2.31
KTN1-210ENST00000553624 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
KTN1-210ENST00000553624 PTPN13Q12923 2485 aa0.6□□□□□ -2.31
KTN1-210ENST00000553624 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
KTN1-210ENST00000553624 M0QY20 66 aa0.6□□□□□ -2.31
KTN1-210ENST00000553624 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
KTN1-210ENST00000553624 HECTD1Q9ULT8 2610 aa0.59□□□□□ -2.31
KTN1-210ENST00000553624 A8MTW9 85 aa0.59□□□□□ -2.31
KTN1-210ENST00000553624 PKD1L1Q8TDX9 2849 aa0.58□□□□□ -2.32
KTN1-210ENST00000553624 SPRR2BP35325 72 aa0.58□□□□□ -2.32
KTN1-210ENST00000553624 GCC2Q8IWJ2 1684 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms