RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LINC00483Q53H64 154 aa10.61□□□□□ -0.71
PSEN1-206ENST00000553447 LOC110117498A0A087WWA1 95 aa10.6□□□□□ -0.71
PSEN1-206ENST00000553447 DSCR8Q96T75 97 aa10.6□□□□□ -0.71
PSEN1-206ENST00000553447 TRBV7-4A0A0J9YYF1 115 aa10.59□□□□□ -0.71
PSEN1-206ENST00000553447 F8WEM9 126 aa10.59□□□□□ -0.71
PSEN1-206ENST00000553447 CDK2AP2O75956 126 aa10.59□□□□□ -0.71
PSEN1-206ENST00000553447 PDE6GP18545 87 aa10.57□□□□□ -0.72
PSEN1-206ENST00000553447 Q6ZQT0 140 aa10.57□□□□□ -0.72
PSEN1-206ENST00000553447 CCKP06307 115 aa10.56□□□□□ -0.72
PSEN1-206ENST00000553447 IGLV8-61A0A075B6I0 122 aa10.55□□□□□ -0.72
PSEN1-206ENST00000553447 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-206ENST00000553447 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
PSEN1-206ENST00000553447 FAM240AA0A1B0GVK7 77 aa10.52□□□□□ -0.73
PSEN1-206ENST00000553447 C21orf62-AS1Q17RA5 79 aa10.52□□□□□ -0.73
PSEN1-206ENST00000553447 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
PSEN1-206ENST00000553447 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
PSEN1-206ENST00000553447 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
PSEN1-206ENST00000553447 ACYP1P07311 99 aa10.5□□□□□ -0.73
PSEN1-206ENST00000553447 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
PSEN1-206ENST00000553447 Q6JHZ5 121 aa10.49□□□□□ -0.73
PSEN1-206ENST00000553447 IGFL1Q6UW32 110 aa10.49□□□□□ -0.73
PSEN1-206ENST00000553447 VPS25Q9BRG1 176 aa10.49□□□□□ -0.73
PSEN1-206ENST00000553447 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
PSEN1-206ENST00000553447 PLA2G1BP04054 148 aaKnown RBP10.48□□□□□ -0.73
PSEN1-206ENST00000553447 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
PSEN1-206ENST00000553447 A0A0G2JQZ4 141 aa10.46□□□□□ -0.73
PSEN1-206ENST00000553447 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
PSEN1-206ENST00000553447 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
PSEN1-206ENST00000553447 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
PSEN1-206ENST00000553447 MOBPQ13875 183 aa10.45□□□□□ -0.74
PSEN1-206ENST00000553447 Q8NBF4 154 aa10.45□□□□□ -0.74
PSEN1-206ENST00000553447 Q5VSD8 79 aa10.43□□□□□ -0.74
PSEN1-206ENST00000553447 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
PSEN1-206ENST00000553447 LINC00846Q9NV44 126 aa10.43□□□□□ -0.74
PSEN1-206ENST00000553447 FAT1Q14517 4588 aa10.43□□□□□ -0.74
PSEN1-206ENST00000553447 HSPG2P98160 4391 aa10.42□□□□□ -0.74
PSEN1-206ENST00000553447 EPPK1P58107 5090 aaKnown RBP10.42□□□□□ -0.74
PSEN1-206ENST00000553447 RYR1P21817 5038 aa10.41□□□□□ -0.74
PSEN1-206ENST00000553447 A0A087X002 238 aa10.41□□□□□ -0.74
PSEN1-206ENST00000553447 A0A1B0GW54 56 aa10.39□□□□□ -0.75
PSEN1-206ENST00000553447 CRYGAP11844 174 aa10.39□□□□□ -0.75
PSEN1-206ENST00000553447 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
PSEN1-206ENST00000553447 Q6Q795 121 aa10.38□□□□□ -0.75
PSEN1-206ENST00000553447 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
PSEN1-206ENST00000553447 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
PSEN1-206ENST00000553447 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
PSEN1-206ENST00000553447 Q8N1X5 172 aa10.35□□□□□ -0.75
PSEN1-206ENST00000553447 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
PSEN1-206ENST00000553447 Q6ZVQ6 151 aa10.32□□□□□ -0.76
PSEN1-206ENST00000553447 A0A087WSZ3 146 aa10.31□□□□□ -0.76
PSEN1-206ENST00000553447 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
PSEN1-206ENST00000553447 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
PSEN1-206ENST00000553447 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
PSEN1-206ENST00000553447 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
PSEN1-206ENST00000553447 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
PSEN1-206ENST00000553447 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
PSEN1-206ENST00000553447 CD164Q04900 197 aa10.28□□□□□ -0.76
PSEN1-206ENST00000553447 NREPQ16612 68 aa10.28□□□□□ -0.76
PSEN1-206ENST00000553447 MT-ATP8P03928 68 aa10.25□□□□□ -0.77
PSEN1-206ENST00000553447 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
PSEN1-206ENST00000553447 ATP5EP2Q5VTU8 51 aa10.23□□□□□ -0.77
PSEN1-206ENST00000553447 IGKV3D-7A0A0C4DH55 119 aa10.21□□□□□ -0.77
PSEN1-206ENST00000553447 SS18L2Q9UHA2 77 aa10.21□□□□□ -0.77
PSEN1-206ENST00000553447 CXCL6P80162 114 aa10.18□□□□□ -0.78
PSEN1-206ENST00000553447 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
PSEN1-206ENST00000553447 BPY2O14599 106 aa10.17□□□□□ -0.78
PSEN1-206ENST00000553447 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
PSEN1-206ENST00000553447 LINC00472Q9H8W2 130 aa10.16□□□□□ -0.78
PSEN1-206ENST00000553447 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.79
PSEN1-206ENST00000553447 SPINK1P00995 79 aa10.14□□□□□ -0.79
PSEN1-206ENST00000553447 Q5XG85 94 aa10.14□□□□□ -0.79
PSEN1-206ENST00000553447 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
PSEN1-206ENST00000553447 DEFB116Q30KQ4 102 aa10.13□□□□□ -0.79
PSEN1-206ENST00000553447 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
PSEN1-206ENST00000553447 Q96NJ1 140 aa10.13□□□□□ -0.79
PSEN1-206ENST00000553447 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
PSEN1-206ENST00000553447 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
PSEN1-206ENST00000553447 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
PSEN1-206ENST00000553447 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
PSEN1-206ENST00000553447 DSCR10P59022 87 aa10.1□□□□□ -0.79
PSEN1-206ENST00000553447 RPS29P62273 56 aaKnown RBP10.1□□□□□ -0.79
PSEN1-206ENST00000553447 J3KT08 172 aa10.09□□□□□ -0.79
PSEN1-206ENST00000553447 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
PSEN1-206ENST00000553447 IGKV4-1P06312 121 aa10.07□□□□□ -0.8
PSEN1-206ENST00000553447 Q8N9L7 120 aa10.07□□□□□ -0.8
PSEN1-206ENST00000553447 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
PSEN1-206ENST00000553447 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-206ENST00000553447 A0A087WVE0 104 aa10.03□□□□□ -0.8
PSEN1-206ENST00000553447 A8MWP4 228 aa10.03□□□□□ -0.8
PSEN1-206ENST00000553447 K7EQZ3 153 aa10.03□□□□□ -0.8
PSEN1-206ENST00000553447 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
PSEN1-206ENST00000553447 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
PSEN1-206ENST00000553447 TNXBP22105 4242 aa10.02□□□□□ -0.81
PSEN1-206ENST00000553447 OXTP01178 125 aa10.01□□□□□ -0.81
PSEN1-206ENST00000553447 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
PSEN1-206ENST00000553447 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
PSEN1-206ENST00000553447 PRR15Q8IV56 129 aa9.99□□□□□ -0.81
PSEN1-206ENST00000553447 HERC2O95714 4834 aa9.98□□□□□ -0.81
PSEN1-206ENST00000553447 NDUFB1O75438 58 aa9.98□□□□□ -0.81
PSEN1-206ENST00000553447 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms